EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000002637 (Gene tree)
Gene ID: -
Gene Symbol: ncl
Alias: fa12d03|wu:fa12d03|zgc:152810
Full Name: nucleolin
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 5047 bases
Position: chrKK581905.1:123487-128533
Accession: 103372811
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000003422	RRM_1	PF00076.22	6.1e-49	1	3
ENSSPAP00000003422	RRM_1	PF00076.22	6.1e-49	2	3
ENSSPAP00000003422	RRM_1	PF00076.22	6.1e-49	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000003486	-	2397	XM_008302545	ENSSPAP00000003422	358 (aa)	XP_008300767	-

Gene Model

Click here to download ENSSPAG00000002637's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000002637's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000002637	ncl	73	30.387	ENSSPAG00000017137	pabpc1l	63	30.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000002637	ncl	85	41.846	ENSAPOG00000014534	-	50	41.946	Acanthochromis_polyacanthus
ENSSPAG00000002637	ncl	82	93.262	ENSAPOG00000023888	ncl	52	93.262	Acanthochromis_polyacanthus
ENSSPAG00000002637	ncl	86	78.827	ENSACIG00000013234	ncl	51	78.827	Amphilophus_citrinellus
ENSSPAG00000002637	ncl	81	41.118	ENSAOCG00000014792	-	60	42.545	Amphiprion_ocellaris
ENSSPAG00000002637	ncl	81	41.447	ENSAPEG00000013612	-	60	42.909	Amphiprion_percula
ENSSPAG00000002637	ncl	90	46.269	ENSATEG00000019862	-	59	46.853	Anabas_testudineus
ENSSPAG00000002637	ncl	82	89.007	ENSATEG00000013343	ncl	50	89.007	Anabas_testudineus
ENSSPAG00000002637	ncl	79	77.305	ENSACLG00000026031	ncl	76	77.305	Astatotilapia_calliptera
ENSSPAG00000002637	ncl	79	72.378	ENSAMXG00000001647	ncl	77	72.727	Astyanax_mexicanus
ENSSPAG00000002637	ncl	78	42.606	ENSCHIG00000012665	-	52	42.509	Capra_hircus
ENSSPAG00000002637	ncl	73	49.107	ENSCHIG00000003401	-	52	49.115	Capra_hircus
ENSSPAG00000002637	ncl	84	85.315	ENSCSEG00000015089	ncl	53	85.315	Cynoglossus_semilaevis
ENSSPAG00000002637	ncl	81	75.265	ENSDARG00000002710	ncl	73	75.618	Danio_rerio
ENSSPAG00000002637	ncl	85	43.322	ENSDNOG00000031611	-	62	45.583	Dasypus_novemcinctus
ENSSPAG00000002637	ncl	66	55.034	ENSDNOG00000040440	-	96	54.167	Dasypus_novemcinctus
ENSSPAG00000002637	ncl	79	74.386	ENSELUG00000006033	ncl	51	74.231	Esox_lucius
ENSSPAG00000002637	ncl	82	52.041	ENSELUG00000022826	-	78	52.465	Esox_lucius
ENSSPAG00000002637	ncl	100	78.212	ENSFHEG00000018000	ncl	72	75.419	Fundulus_heteroclitus
ENSSPAG00000002637	ncl	81	68.166	ENSGMOG00000001341	ncl	54	68.085	Gadus_morhua
ENSSPAG00000002637	ncl	80	82.313	ENSGACG00000008970	ncl	52	82.313	Gasterosteus_aculeatus
ENSSPAG00000002637	ncl	79	80.142	ENSHBUG00000006869	ncl	52	80.142	Haplochromis_burtoni
ENSSPAG00000002637	ncl	79	74.468	ENSIPUG00000024556	ncl	72	74.468	Ictalurus_punctatus
ENSSPAG00000002637	ncl	82	84.043	ENSKMAG00000008111	ncl	50	84.043	Kryptolebias_marmoratus
ENSSPAG00000002637	ncl	81	44.781	ENSLBEG00000014278	-	63	45.230	Labrus_bergylta
ENSSPAG00000002637	ncl	82	90.426	ENSLBEG00000019073	ncl	54	90.426	Labrus_bergylta
ENSSPAG00000002637	ncl	78	53.873	ENSLACG00000022167	-	60	54.064	Latimeria_chalumnae
ENSSPAG00000002637	ncl	83	67.361	ENSLACG00000009328	ncl	54	67.254	Latimeria_chalumnae
ENSSPAG00000002637	ncl	83	43.092	ENSMAMG00000003479	-	69	43.542	Mastacembelus_armatus
ENSSPAG00000002637	ncl	79	62.153	ENSMGAG00000008147	-	100	62.667	Meleagris_gallopavo
ENSSPAG00000002637	ncl	89	85.804	ENSMMOG00000008553	ncl	75	89.007	Mola_mola
ENSSPAG00000002637	ncl	83	58.966	ENSMODG00000002470	-	51	58.784	Monodelphis_domestica
ENSSPAG00000002637	ncl	82	88.372	ENSMALG00000014827	ncl	51	88.372	Monopterus_albus
ENSSPAG00000002637	ncl	80	42.449	ENSMPUG00000001663	-	57	42.449	Mustela_putorius_furo
ENSSPAG00000002637	ncl	79	80.142	ENSNBRG00000001232	ncl	79	80.142	Neolamprologus_brichardi
ENSSPAG00000002637	ncl	79	80.142	ENSNBRG00000000146	-	82	80.142	Neolamprologus_brichardi
ENSSPAG00000002637	ncl	79	60.351	ENSMEUG00000012335	-	52	60.279	Notamacropus_eugenii
ENSSPAG00000002637	ncl	79	80.142	ENSONIG00000012508	ncl	51	80.142	Oreochromis_niloticus
ENSSPAG00000002637	ncl	79	38.754	ENSONIG00000010631	-	73	38.542	Oreochromis_niloticus
ENSSPAG00000002637	ncl	77	64.925	ENSOANG00000008732	-	58	63.448	Ornithorhynchus_anatinus
ENSSPAG00000002637	ncl	82	86.525	ENSORLG00000007055	ncl	53	86.525	Oryzias_latipes
ENSSPAG00000002637	ncl	80	38.699	ENSORLG00000004645	-	58	40.741	Oryzias_latipes
ENSSPAG00000002637	ncl	78	39.298	ENSORLG00020003497	-	52	40.741	Oryzias_latipes_hni
ENSSPAG00000002637	ncl	82	86.525	ENSORLG00020017943	ncl	53	86.525	Oryzias_latipes_hni
ENSSPAG00000002637	ncl	79	86.170	ENSORLG00015013815	ncl	78	86.170	Oryzias_latipes_hsok
ENSSPAG00000002637	ncl	78	40.070	ENSORLG00015006613	-	54	40.741	Oryzias_latipes_hsok
ENSSPAG00000002637	ncl	84	38.217	ENSOMEG00000015864	-	57	40.672	Oryzias_melastigma
ENSSPAG00000002637	ncl	82	79.522	ENSPKIG00000002604	ncl	53	79.181	Paramormyrops_kingsleyae
ENSSPAG00000002637	ncl	84	65.744	ENSPSIG00000002361	-	52	65.278	Pelodiscus_sinensis
ENSSPAG00000002637	ncl	79	81.272	ENSPMGG00000004709	ncl	73	81.272	Periophthalmus_magnuspinnatus
ENSSPAG00000002637	ncl	83	60.000	ENSPCIG00000003293	-	51	59.932	Phascolarctos_cinereus
ENSSPAG00000002637	ncl	82	55.245	ENSSHAG00000002702	-	56	55.208	Sarcophilus_harrisii
ENSSPAG00000002637	ncl	100	70.752	ENSSFOG00015008583	ncl	56	79.505	Scleropages_formosus
ENSSPAG00000002637	ncl	80	45.361	ENSSFOG00015013153	-	69	46.099	Scleropages_formosus
ENSSPAG00000002637	ncl	79	87.018	ENSSMAG00000021241	ncl	50	87.018	Scophthalmus_maximus
ENSSPAG00000002637	ncl	100	81.285	ENSSDUG00000006128	ncl	83	92.553	Seriola_dumerili
ENSSPAG00000002637	ncl	80	45.424	ENSSDUG00000010922	-	66	46.350	Seriola_dumerili
ENSSPAG00000002637	ncl	82	92.199	ENSSLDG00000002012	ncl	52	92.199	Seriola_lalandi_dorsalis
ENSSPAG00000002637	ncl	82	84.752	ENSTRUG00000008185	ncl	51	84.752	Takifugu_rubripes
ENSSPAG00000002637	ncl	86	84.286	ENSTNIG00000012186	ncl	59	84.043	Tetraodon_nigroviridis
ENSSPAG00000002637	ncl	82	62.544	ENSXCOG00000003524	ncl	75	62.411	Xiphophorus_couchianus
ENSSPAG00000002637	ncl	86	38.994	ENSXCOG00000007369	-	64	42.804	Xiphophorus_couchianus