EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000002821 (Gene tree)
Gene ID: 103359951
Gene Symbol: srsf5a
Alias: fb49e01|im:6906390|sfrs5|sfrs5a|wu:fb49e01|wu:fj09b12
Full Name: serine and arginine rich splicing factor 5
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 8671 bases
Position: chrKK580478.1:409381-418051
Accession: 103359951
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000003658	RRM_1	PF00076.22	2.7e-33	1	2
ENSSPAP00000003658	RRM_1	PF00076.22	2.7e-33	2	2
ENSSPAP00000003658	RRM_3	PF08777.11	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000003733	-	2114	XM_008285535	ENSSPAP00000003658	289 (aa)	XP_008283757	UPI0004977354

Gene Model

Click here to download ENSSPAG00000002821's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000002821's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000002821	srsf5a	59	43.575	ENSSPAG00000014152	-	69	41.899
ENSSPAG00000002821	srsf5a	60	42.697	ENSSPAG00000006285	srsf9	75	38.144
ENSSPAG00000002821	srsf5a	59	41.477	ENSSPAG00000022562	-	67	40.909
ENSSPAG00000002821	srsf5a	64	70.588	ENSSPAG00000015325	srsf5b	63	71.196
ENSSPAG00000002821	srsf5a	94	52.669	ENSSPAG00000002362	srsf6a	65	63.587
ENSSPAG00000002821	srsf5a	94	50.365	ENSSPAG00000014538	srsf4	92	60.432

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000002821	srsf5a	100	96.622	ENSAPOG00000017395	srsf5a	100	96.622	Acanthochromis_polyacanthus
ENSSPAG00000002821	srsf5a	100	80.887	ENSACIG00000011892	srsf5a	98	86.029	Amphilophus_citrinellus
ENSSPAG00000002821	srsf5a	100	96.928	ENSAOCG00000014967	srsf5a	100	96.928	Amphiprion_ocellaris
ENSSPAG00000002821	srsf5a	100	96.587	ENSAPEG00000009297	srsf5a	100	96.587	Amphiprion_percula
ENSSPAG00000002821	srsf5a	81	94.515	ENSATEG00000000198	srsf5a	82	95.745	Anabas_testudineus
ENSSPAG00000002821	srsf5a	63	78.378	ENSAPLG00000002469	-	70	75.135	Anas_platyrhynchos
ENSSPAG00000002821	srsf5a	63	78.689	ENSACAG00000029015	-	68	77.596	Anolis_carolinensis
ENSSPAG00000002821	srsf5a	80	91.213	ENSACLG00000027166	srsf5a	81	90.795	Astatotilapia_calliptera
ENSSPAG00000002821	srsf5a	63	75.000	ENSAMXG00000030476	srsf5a	67	88.108	Astyanax_mexicanus
ENSSPAG00000002821	srsf5a	63	80.978	ENSCPBG00000021518	-	70	77.596	Chrysemys_picta_bellii
ENSSPAG00000002821	srsf5a	63	54.082	ENSCSAVG00000011376	-	78	55.102	Ciona_savignyi
ENSSPAG00000002821	srsf5a	81	88.889	ENSCSEG00000008109	srsf5a	77	88.797	Cynoglossus_semilaevis
ENSSPAG00000002821	srsf5a	79	78.601	ENSCVAG00000016982	srsf5a	97	74.627	Cyprinodon_variegatus
ENSSPAG00000002821	srsf5a	63	87.500	ENSDARG00000029818	srsf5a	100	85.714	Danio_rerio
ENSSPAG00000002821	srsf5a	63	81.347	ENSELUG00000020439	srsf5a	62	79.793	Esox_lucius
ENSSPAG00000002821	srsf5a	63	78.142	ENSFALG00000005098	-	64	75.410	Ficedula_albicollis
ENSSPAG00000002821	srsf5a	81	76.357	ENSFHEG00000003955	srsf5a	97	68.276	Fundulus_heteroclitus
ENSSPAG00000002821	srsf5a	63	90.164	ENSGMOG00000000869	srsf5a	94	86.339	Gadus_morhua
ENSSPAG00000002821	srsf5a	63	78.689	ENSGALG00000033259	SRSF5A	63	76.503	Gallus_gallus
ENSSPAG00000002821	srsf5a	82	74.486	ENSGAFG00000018237	srsf5a	74	64.435	Gambusia_affinis
ENSSPAG00000002821	srsf5a	100	75.085	ENSGACG00000011761	srsf5a	70	89.617	Gasterosteus_aculeatus
ENSSPAG00000002821	srsf5a	63	80.978	ENSGAGG00000007312	-	70	77.596	Gopherus_agassizii
ENSSPAG00000002821	srsf5a	80	91.176	ENSHBUG00000014048	srsf5a	80	91.139	Haplochromis_burtoni
ENSSPAG00000002821	srsf5a	63	89.785	ENSHCOG00000017557	srsf5a	80	84.711	Hippocampus_comes
ENSSPAG00000002821	srsf5a	100	65.064	ENSIPUG00000003439	srsf5a	69	84.737	Ictalurus_punctatus
ENSSPAG00000002821	srsf5a	87	72.727	ENSKMAG00000014937	srsf5a	71	80.508	Kryptolebias_marmoratus
ENSSPAG00000002821	srsf5a	63	83.590	ENSLBEG00000017153	srsf5a	91	80.913	Labrus_bergylta
ENSSPAG00000002821	srsf5a	63	84.153	ENSLACG00000017874	-	70	82.514	Latimeria_chalumnae
ENSSPAG00000002821	srsf5a	63	87.568	ENSLOCG00000014075	srsf5a	61	87.027	Lepisosteus_oculatus
ENSSPAG00000002821	srsf5a	100	91.696	ENSMAMG00000000192	srsf5a	82	89.655	Mastacembelus_armatus
ENSSPAG00000002821	srsf5a	80	91.597	ENSMZEG00005010485	srsf5a	81	91.176	Maylandia_zebra
ENSSPAG00000002821	srsf5a	68	76.650	ENSMGAG00000011888	-	96	74.545	Meleagris_gallopavo
ENSSPAG00000002821	srsf5a	100	89.226	ENSMMOG00000009793	srsf5a	78	90.948	Mola_mola
ENSSPAG00000002821	srsf5a	100	83.849	ENSMALG00000021194	srsf5a	79	83.190	Monopterus_albus
ENSSPAG00000002821	srsf5a	80	91.983	ENSNBRG00000000771	srsf5a	81	91.561	Neolamprologus_brichardi
ENSSPAG00000002821	srsf5a	80	91.983	ENSONIG00000019583	srsf5a	81	91.561	Oreochromis_niloticus
ENSSPAG00000002821	srsf5a	80	85.714	ENSORLG00000009268	srsf5a	83	84.416	Oryzias_latipes
ENSSPAG00000002821	srsf5a	80	85.714	ENSORLG00020003281	srsf5	83	84.416	Oryzias_latipes_hni
ENSSPAG00000002821	srsf5a	80	85.714	ENSORLG00015023075	srsf5	83	84.416	Oryzias_latipes_hsok
ENSSPAG00000002821	srsf5a	80	83.478	ENSOMEG00000000628	srsf5a	83	84.483	Oryzias_melastigma
ENSSPAG00000002821	srsf5a	63	87.634	ENSPKIG00000002054	srsf5a	68	88.172	Paramormyrops_kingsleyae
ENSSPAG00000002821	srsf5a	63	80.435	ENSPSIG00000008238	-	69	75.543	Pelodiscus_sinensis
ENSSPAG00000002821	srsf5a	93	73.333	ENSPMGG00000020125	srsf5a	55	83.607	Periophthalmus_magnuspinnatus
ENSSPAG00000002821	srsf5a	82	77.647	ENSPFOG00000022993	srsf5a	78	76.707	Poecilia_formosa
ENSSPAG00000002821	srsf5a	81	77.559	ENSPLAG00000005508	srsf5a	77	76.613	Poecilia_latipinna
ENSSPAG00000002821	srsf5a	82	78.039	ENSPMEG00000016339	srsf5a	78	78.715	Poecilia_mexicana
ENSSPAG00000002821	srsf5a	82	77.734	ENSPREG00000018091	srsf5a	79	78.400	Poecilia_reticulata
ENSSPAG00000002821	srsf5a	80	91.597	ENSPNYG00000021245	srsf5a	81	91.176	Pundamilia_nyererei
ENSSPAG00000002821	srsf5a	79	81.070	ENSSFOG00015008377	srsf5	86	73.663	Scleropages_formosus
ENSSPAG00000002821	srsf5a	80	81.028	ENSSMAG00000010899	srsf5a	83	84.585	Scophthalmus_maximus
ENSSPAG00000002821	srsf5a	92	94.340	ENSSDUG00000006103	srsf5a	80	94.397	Seriola_dumerili
ENSSPAG00000002821	srsf5a	100	93.857	ENSSLDG00000004146	srsf5a	80	94.828	Seriola_lalandi_dorsalis
ENSSPAG00000002821	srsf5a	63	75.956	ENSSPUG00000002052	-	68	73.770	Sphenodon_punctatus
ENSSPAG00000002821	srsf5a	63	79.235	ENSTGUG00000011492	-	68	75.410	Taeniopygia_guttata
ENSSPAG00000002821	srsf5a	100	84.564	ENSTRUG00000022908	srsf5a	81	88.750	Takifugu_rubripes
ENSSPAG00000002821	srsf5a	99	62.126	ENSXETG00000017937	srsf5a	72	77.660	Xenopus_tropicalis
ENSSPAG00000002821	srsf5a	82	80.328	ENSXCOG00000015338	srsf5a	78	80.672	Xiphophorus_couchianus
ENSSPAG00000002821	srsf5a	82	77.647	ENSXMAG00000012823	srsf5a	79	78.313	Xiphophorus_maculatus