EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000002894 (Gene tree)
Gene ID: 103372891
Gene Symbol: smarca5
Alias: SWI/SNF related|matrix associated|actin dependent regulator of chromatin A5|chunp6878|fb26d12|fb49g04|im:7146484|wu:fb26d12|wu:fb49g04|zgc:158434
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 12439 bases
Position: chrKK580108.1:421057-433495
Accession: 103372891
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000003804	ResIII	PF04851.15	7.8e-11	1	1
ENSSPAP00000003852	ResIII	PF04851.15	8.5e-11	1	1
ENSSPAP00000003852	DEAD	PF00270.29	5.3e-06	1	1
ENSSPAP00000003804	DEAD	PF00270.29	6.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000003885	-	7674	XM_008302665	ENSSPAP00000003804	1036 (aa)	XP_008300887	UPI0004956D9A
ENSSPAT00000003933	-	2835	-	ENSSPAP00000003852	944 (aa)	-	-

Gene Model

Click here to download ENSSPAG00000002894's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000002894's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000002894	smarca5	58	42.182	ENSSPAG00000017653	chd1l	57	42.182
ENSSPAG00000002894	smarca5	57	40.064	ENSSPAG00000015579	hells	90	39.744

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000002894	smarca5	97	84.026	ENSG00000102038	SMARCA1	93	83.299	Homo_sapiens
ENSSPAG00000002894	smarca5	100	99.421	ENSAPOG00000016035	smarca5	100	99.421	Acanthochromis_polyacanthus
ENSSPAG00000002894	smarca5	97	83.153	ENSAMEG00000015218	SMARCA1	93	82.294	Ailuropoda_melanoleuca
ENSSPAG00000002894	smarca5	95	98.446	ENSACIG00000016982	smarca5	100	98.446	Amphilophus_citrinellus
ENSSPAG00000002894	smarca5	100	99.421	ENSAOCG00000015578	smarca5	100	99.421	Amphiprion_ocellaris
ENSSPAG00000002894	smarca5	100	99.421	ENSAPEG00000011117	smarca5	100	99.421	Amphiprion_percula
ENSSPAG00000002894	smarca5	100	98.069	ENSATEG00000012894	smarca5	100	98.069	Anabas_testudineus
ENSSPAG00000002894	smarca5	97	84.182	ENSAPLG00000013149	SMARCA1	99	84.114	Anas_platyrhynchos
ENSSPAG00000002894	smarca5	97	84.995	ENSACAG00000011376	SMARCA1	94	84.521	Anolis_carolinensis
ENSSPAG00000002894	smarca5	97	78.884	ENSANAG00000023098	SMARCA1	93	78.513	Aotus_nancymaae
ENSSPAG00000002894	smarca5	100	97.683	ENSACLG00000025356	smarca5	100	97.683	Astatotilapia_calliptera
ENSSPAG00000002894	smarca5	97	95.316	ENSAMXG00000005709	smarca5	97	93.657	Astyanax_mexicanus
ENSSPAG00000002894	smarca5	96	84.556	ENSAMXG00000011227	smarca1	99	85.766	Astyanax_mexicanus
ENSSPAG00000002894	smarca5	96	84.251	ENSBTAG00000002292	SMARCA1	91	83.351	Bos_taurus
ENSSPAG00000002894	smarca5	96	66.412	WBGene00002169	isw-1	95	63.983	Caenorhabditis_elegans
ENSSPAG00000002894	smarca5	97	84.026	ENSCJAG00000002868	SMARCA1	93	83.299	Callithrix_jacchus
ENSSPAG00000002894	smarca5	97	74.006	ENSCAFG00000018673	SMARCA1	99	75.410	Canis_familiaris
ENSSPAG00000002894	smarca5	97	84.245	ENSCAFG00020001751	SMARCA1	93	83.401	Canis_lupus_dingo
ENSSPAG00000002894	smarca5	97	83.917	ENSCHIG00000009837	SMARCA1	92	82.994	Capra_hircus
ENSSPAG00000002894	smarca5	97	84.354	ENSTSYG00000004240	SMARCA1	94	84.372	Carlito_syrichta
ENSSPAG00000002894	smarca5	97	83.479	ENSCPOG00000013601	SMARCA1	93	81.984	Cavia_porcellus
ENSSPAG00000002894	smarca5	97	81.291	ENSCCAG00000030817	SMARCA1	93	80.652	Cebus_capucinus
ENSSPAG00000002894	smarca5	97	82.937	ENSCATG00000015921	SMARCA1	93	82.294	Cercocebus_atys
ENSSPAG00000002894	smarca5	97	83.479	ENSCLAG00000002171	SMARCA1	93	82.587	Chinchilla_lanigera
ENSSPAG00000002894	smarca5	97	84.026	ENSCSAG00000008460	SMARCA1	93	83.299	Chlorocebus_sabaeus
ENSSPAG00000002894	smarca5	97	84.902	ENSCPBG00000001146	SMARCA1	93	84.420	Chrysemys_picta_bellii
ENSSPAG00000002894	smarca5	98	75.699	ENSCING00000004110	swi/snf	99	74.056	Ciona_intestinalis
ENSSPAG00000002894	smarca5	96	76.721	ENSCSAVG00000004620	-	99	76.174	Ciona_savignyi
ENSSPAG00000002894	smarca5	97	84.136	ENSCANG00000007183	SMARCA1	93	83.401	Colobus_angolensis_palliatus
ENSSPAG00000002894	smarca5	97	83.260	ENSCGRG00001010776	Smarca1	93	82.281	Cricetulus_griseus_chok1gshd
ENSSPAG00000002894	smarca5	94	84.270	ENSCGRG00000015301	Smarca1	97	81.379	Cricetulus_griseus_crigri
ENSSPAG00000002894	smarca5	100	97.297	ENSCSEG00000000328	smarca5	100	97.297	Cynoglossus_semilaevis
ENSSPAG00000002894	smarca5	100	96.718	ENSCVAG00000008668	smarca5	99	97.757	Cyprinodon_variegatus
ENSSPAG00000002894	smarca5	96	82.976	ENSDARG00000012776	smarca1	96	83.015	Danio_rerio
ENSSPAG00000002894	smarca5	100	91.715	ENSDARG00000052348	smarca5	100	91.120	Danio_rerio
ENSSPAG00000002894	smarca5	94	84.831	ENSDNOG00000004315	SMARCA1	91	84.305	Dasypus_novemcinctus
ENSSPAG00000002894	smarca5	94	85.073	ENSDORG00000009270	Smarca1	90	84.517	Dipodomys_ordii
ENSSPAG00000002894	smarca5	94	78.683	FBgn0011604	Iswi	97	74.400	Drosophila_melanogaster
ENSSPAG00000002894	smarca5	78	81.818	ENSETEG00000017426	SMARCA1	83	81.818	Echinops_telfairi
ENSSPAG00000002894	smarca5	96	83.168	ENSEBUG00000001239	smarca5	99	80.536	Eptatretus_burgeri
ENSSPAG00000002894	smarca5	95	81.042	ENSEASG00005008218	SMARCA1	99	79.453	Equus_asinus_asinus
ENSSPAG00000002894	smarca5	97	84.245	ENSECAG00000012106	SMARCA1	92	83.299	Equus_caballus
ENSSPAG00000002894	smarca5	78	86.939	ENSEEUG00000014927	SMARCA1	80	84.106	Erinaceus_europaeus
ENSSPAG00000002894	smarca5	96	84.775	ENSELUG00000010515	smarca1	95	85.495	Esox_lucius
ENSSPAG00000002894	smarca5	97	84.136	ENSFCAG00000018496	SMARCA1	93	83.299	Felis_catus
ENSSPAG00000002894	smarca5	91	86.098	ENSFALG00000000209	SMARCA1	98	85.449	Ficedula_albicollis
ENSSPAG00000002894	smarca5	94	83.592	ENSFDAG00000009818	SMARCA1	94	82.932	Fukomys_damarensis
ENSSPAG00000002894	smarca5	100	95.415	ENSFHEG00000007687	smarca5	100	95.415	Fundulus_heteroclitus
ENSSPAG00000002894	smarca5	94	86.164	ENSGALG00000008431	SMARCA1	97	83.283	Gallus_gallus
ENSSPAG00000002894	smarca5	100	97.201	ENSGAFG00000017731	smarca5	100	97.201	Gambusia_affinis
ENSSPAG00000002894	smarca5	97	84.902	ENSGAGG00000023575	SMARCA1	99	84.774	Gopherus_agassizii
ENSSPAG00000002894	smarca5	70	96.000	ENSGGOG00000012841	-	92	79.708	Gorilla_gorilla
ENSSPAG00000002894	smarca5	97	82.932	ENSHGLG00000003080	SMARCA1	93	82.179	Heterocephalus_glaber_female
ENSSPAG00000002894	smarca5	97	82.932	ENSHGLG00100001102	SMARCA1	99	81.680	Heterocephalus_glaber_male
ENSSPAG00000002894	smarca5	100	97.589	ENSHCOG00000005458	smarca5	100	97.589	Hippocampus_comes
ENSSPAG00000002894	smarca5	97	84.473	ENSIPUG00000016905	Smarca1	99	84.292	Ictalurus_punctatus
ENSSPAG00000002894	smarca5	97	94.662	ENSIPUG00000005229	SMARCA5	99	93.413	Ictalurus_punctatus
ENSSPAG00000002894	smarca5	97	83.807	ENSSTOG00000014524	SMARCA1	95	83.214	Ictidomys_tridecemlineatus
ENSSPAG00000002894	smarca5	97	83.260	ENSJJAG00000002593	Smarca1	93	81.966	Jaculus_jaculus
ENSSPAG00000002894	smarca5	100	96.815	ENSKMAG00000003777	smarca5	100	96.815	Kryptolebias_marmoratus
ENSSPAG00000002894	smarca5	94	96.728	ENSLBEG00000013295	SMARCA1	100	98.481	Labrus_bergylta
ENSSPAG00000002894	smarca5	100	96.718	ENSLBEG00000018112	smarca5	100	96.718	Labrus_bergylta
ENSSPAG00000002894	smarca5	96	85.683	ENSLACG00000016697	SMARCA1	96	84.836	Latimeria_chalumnae
ENSSPAG00000002894	smarca5	97	86.105	ENSLOCG00000014591	smarca1	95	85.714	Lepisosteus_oculatus
ENSSPAG00000002894	smarca5	97	83.370	ENSLAFG00000000896	SMARCA1	98	82.085	Loxodonta_africana
ENSSPAG00000002894	smarca5	97	84.026	ENSMFAG00000002117	SMARCA1	94	84.444	Macaca_fascicularis
ENSSPAG00000002894	smarca5	97	82.937	ENSMMUG00000008818	SMARCA1	97	84.936	Macaca_mulatta
ENSSPAG00000002894	smarca5	97	82.937	ENSMNEG00000041768	SMARCA1	94	84.444	Macaca_nemestrina
ENSSPAG00000002894	smarca5	97	84.026	ENSMLEG00000043198	SMARCA1	93	83.299	Mandrillus_leucophaeus
ENSSPAG00000002894	smarca5	100	97.979	ENSMAMG00000014294	smarca5	100	97.979	Mastacembelus_armatus
ENSSPAG00000002894	smarca5	100	97.683	ENSMZEG00005009369	smarca5	100	97.683	Maylandia_zebra
ENSSPAG00000002894	smarca5	97	83.585	ENSMGAG00000007042	SMARCA1	98	82.998	Meleagris_gallopavo
ENSSPAG00000002894	smarca5	94	84.382	ENSMAUG00000008133	Smarca1	91	82.199	Mesocricetus_auratus
ENSSPAG00000002894	smarca5	97	84.245	ENSMICG00000015768	SMARCA1	93	83.605	Microcebus_murinus
ENSSPAG00000002894	smarca5	97	83.042	ENSMOCG00000009464	Smarca1	93	81.560	Microtus_ochrogaster
ENSSPAG00000002894	smarca5	97	96.841	ENSMMOG00000005547	smarca5	100	96.881	Mola_mola
ENSSPAG00000002894	smarca5	98	84.056	ENSMODG00000013187	-	94	83.894	Monodelphis_domestica
ENSSPAG00000002894	smarca5	100	97.686	ENSMALG00000002081	smarca5	100	97.686	Monopterus_albus
ENSSPAG00000002894	smarca5	97	83.370	MGP_CAROLIEiJ_G0033034	Smarca1	92	82.263	Mus_caroli
ENSSPAG00000002894	smarca5	97	83.370	ENSMUSG00000031099	Smarca1	93	81.864	Mus_musculus
ENSSPAG00000002894	smarca5	96	83.682	MGP_PahariEiJ_G0031579	Smarca1	92	82.143	Mus_pahari
ENSSPAG00000002894	smarca5	97	83.370	MGP_SPRETEiJ_G0034192	Smarca1	93	81.864	Mus_spretus
ENSSPAG00000002894	smarca5	97	83.153	ENSMPUG00000017423	SMARCA1	88	82.394	Mustela_putorius_furo
ENSSPAG00000002894	smarca5	97	81.897	ENSMLUG00000029614	SMARCA1	93	80.823	Myotis_lucifugus
ENSSPAG00000002894	smarca5	94	84.719	ENSNGAG00000006492	Smarca1	91	82.723	Nannospalax_galili
ENSSPAG00000002894	smarca5	97	98.039	ENSNBRG00000004463	smarca5	99	98.290	Neolamprologus_brichardi
ENSSPAG00000002894	smarca5	97	82.181	ENSNLEG00000015179	SMARCA1	94	83.721	Nomascus_leucogenys
ENSSPAG00000002894	smarca5	91	75.685	ENSMEUG00000008819	SMARCA1	98	76.043	Notamacropus_eugenii
ENSSPAG00000002894	smarca5	94	83.703	ENSODEG00000012163	SMARCA1	91	82.932	Octodon_degus
ENSSPAG00000002894	smarca5	100	97.780	ENSONIG00000009993	smarca5	100	97.780	Oreochromis_niloticus
ENSSPAG00000002894	smarca5	97	85.230	ENSOANG00000002862	SMARCA1	99	85.082	Ornithorhynchus_anatinus
ENSSPAG00000002894	smarca5	97	84.044	ENSOCUG00000001047	SMARCA1	93	83.401	Oryctolagus_cuniculus
ENSSPAG00000002894	smarca5	100	96.827	ENSORLG00000021998	smarca5	100	96.827	Oryzias_latipes
ENSSPAG00000002894	smarca5	100	96.920	ENSORLG00020017679	smarca5	100	96.920	Oryzias_latipes_hni
ENSSPAG00000002894	smarca5	100	97.110	ENSORLG00015017210	smarca5	100	97.110	Oryzias_latipes_hsok
ENSSPAG00000002894	smarca5	100	97.107	ENSOMEG00000000086	smarca5	100	97.107	Oryzias_melastigma
ENSSPAG00000002894	smarca5	94	84.462	ENSOGAG00000004399	SMARCA1	91	83.770	Otolemur_garnettii
ENSSPAG00000002894	smarca5	97	83.917	ENSOARG00000014638	SMARCA1	99	83.402	Ovis_aries
ENSSPAG00000002894	smarca5	97	84.026	ENSPPAG00000034647	SMARCA1	93	83.299	Pan_paniscus
ENSSPAG00000002894	smarca5	97	84.245	ENSPPRG00000008929	SMARCA1	93	83.401	Panthera_pardus
ENSSPAG00000002894	smarca5	97	82.277	ENSPTIG00000000915	SMARCA1	96	81.582	Panthera_tigris_altaica
ENSSPAG00000002894	smarca5	97	84.026	ENSPTRG00000049876	SMARCA1	93	82.294	Pan_troglodytes
ENSSPAG00000002894	smarca5	97	84.026	ENSPANG00000003871	SMARCA1	93	83.299	Papio_anubis
ENSSPAG00000002894	smarca5	95	84.263	ENSPKIG00000013411	smarca1	96	84.122	Paramormyrops_kingsleyae
ENSSPAG00000002894	smarca5	97	84.775	ENSPSIG00000010101	SMARCA1	99	84.774	Pelodiscus_sinensis
ENSSPAG00000002894	smarca5	94	84.494	ENSPEMG00000017503	Smarca1	91	82.513	Peromyscus_maniculatus_bairdii
ENSSPAG00000002894	smarca5	98	84.382	ENSPCIG00000015460	SMARCA1	96	84.318	Phascolarctos_cinereus
ENSSPAG00000002894	smarca5	100	97.297	ENSPFOG00000007649	smarca5	100	97.297	Poecilia_formosa
ENSSPAG00000002894	smarca5	100	97.297	ENSPLAG00000003363	smarca5	100	97.297	Poecilia_latipinna
ENSSPAG00000002894	smarca5	100	97.394	ENSPMEG00000019849	smarca5	100	97.394	Poecilia_mexicana
ENSSPAG00000002894	smarca5	100	97.297	ENSPREG00000023250	smarca5	100	97.297	Poecilia_reticulata
ENSSPAG00000002894	smarca5	97	80.963	ENSPPYG00000020703	SMARCA1	93	80.448	Pongo_abelii
ENSSPAG00000002894	smarca5	76	76.445	ENSPCOG00000020722	SMARCA1	94	79.912	Propithecus_coquereli
ENSSPAG00000002894	smarca5	88	83.613	ENSPVAG00000003805	SMARCA1	85	83.706	Pteropus_vampyrus
ENSSPAG00000002894	smarca5	58	98.417	ENSPNYG00000012299	smarca5	92	98.417	Pundamilia_nyererei
ENSSPAG00000002894	smarca5	97	83.151	ENSRNOG00000003762	Smarca1	93	82.077	Rattus_norvegicus
ENSSPAG00000002894	smarca5	97	84.136	ENSRROG00000034167	SMARCA1	93	83.401	Rhinopithecus_roxellana
ENSSPAG00000002894	smarca5	97	84.026	ENSSBOG00000020641	SMARCA1	99	83.607	Saimiri_boliviensis_boliviensis
ENSSPAG00000002894	smarca5	97	80.525	ENSSHAG00000013518	SMARCA1	99	79.630	Sarcophilus_harrisii
ENSSPAG00000002894	smarca5	97	93.355	ENSSFOG00015016794	smarca5	100	93.608	Scleropages_formosus
ENSSPAG00000002894	smarca5	96	85.433	ENSSFOG00015009043	smarca1	96	84.623	Scleropages_formosus
ENSSPAG00000002894	smarca5	100	96.532	ENSSMAG00000004801	smarca5	100	96.532	Scophthalmus_maximus
ENSSPAG00000002894	smarca5	100	97.683	ENSSDUG00000020690	smarca5	100	97.683	Seriola_dumerili
ENSSPAG00000002894	smarca5	100	97.683	ENSSLDG00000025190	smarca5	100	97.683	Seriola_lalandi_dorsalis
ENSSPAG00000002894	smarca5	86	84.342	ENSSARG00000000842	SMARCA1	81	84.342	Sorex_araneus
ENSSPAG00000002894	smarca5	94	85.650	ENSSPUG00000000590	SMARCA1	96	83.249	Sphenodon_punctatus
ENSSPAG00000002894	smarca5	97	84.026	ENSSSCG00000012649	SMARCA1	96	82.028	Sus_scrofa
ENSSPAG00000002894	smarca5	97	84.683	ENSTGUG00000003899	-	99	83.809	Taeniopygia_guttata
ENSSPAG00000002894	smarca5	100	96.718	ENSTRUG00000014094	smarca5	100	96.718	Takifugu_rubripes
ENSSPAG00000002894	smarca5	97	98.138	ENSTNIG00000017717	smarca5	97	95.846	Tetraodon_nigroviridis
ENSSPAG00000002894	smarca5	94	82.594	ENSTBEG00000014973	SMARCA1	89	82.751	Tupaia_belangeri
ENSSPAG00000002894	smarca5	94	80.710	ENSTTRG00000006168	SMARCA1	96	80.400	Tursiops_truncatus
ENSSPAG00000002894	smarca5	97	84.026	ENSUAMG00000020201	SMARCA1	93	83.096	Ursus_americanus
ENSSPAG00000002894	smarca5	97	80.306	ENSUMAG00000004073	SMARCA1	96	84.597	Ursus_maritimus
ENSSPAG00000002894	smarca5	74	86.835	ENSVPAG00000010492	-	77	87.197	Vicugna_pacos
ENSSPAG00000002894	smarca5	97	84.245	ENSVVUG00000008878	SMARCA1	98	85.165	Vulpes_vulpes
ENSSPAG00000002894	smarca5	96	84.835	ENSXETG00000001526	smarca1	98	84.356	Xenopus_tropicalis
ENSSPAG00000002894	smarca5	97	97.712	ENSXCOG00000011170	smarca5	100	97.423	Xiphophorus_couchianus
ENSSPAG00000002894	smarca5	100	97.104	ENSXMAG00000009678	smarca5	100	97.104	Xiphophorus_maculatus