EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSPAG00000002906 (Gene tree)
Gene ID
103360531
Gene Symbol
CPSF3 (1 of many)
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Stegastes_partitus
Status
putative
Strand
Plus strand
Length
6886 bases
Position
chrKK580521.1:17917-24802
Accession
103360531
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSPAP00000003801CPSF73-100_CPF11718.81.2e-5211
ENSSPAP00000003846CPSF73-100_CPF11718.82.6e-5111
ENSSPAP00000003846Beta-CaspPF10996.86.5e-3411
ENSSPAP00000003801Beta-CaspPF10996.87.3e-3411
ENSSPAP00000003801Lactamase_BPF00753.271.4e-1811
ENSSPAP00000003846Lactamase_BPF00753.273.2e-0811
ENSSPAP00000003846RMMBLPF07521.124.7e-2111
ENSSPAP00000003801RMMBLPF07521.125.5e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSPAT00000003927CPSF3 (1 of many)-2021884-ENSSPAP00000003846627 (aa)--
ENSSPAT00000003883CPSF3 (1 of many)-2012614XM_008286313ENSSPAP00000003801690 (aa)XP_008284535UPI0004950167
Gene Model
Click here to download ENSSPAG00000002906's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000002906's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSPAG00000002906CPSF36439.246ENSSPAG00000018290ints117439.246
ENSSPAG00000002906CPSF310088.406ENSSPAG00000018579cpsf310088.406
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSPAG00000002906CPSF39887.794ENSG00000119203CPSF3100100.000Homo_sapiens
ENSSPAG00000002906CPSF37499.607ENSAPOG00000012241CPSF39199.607Acanthochromis_polyacanthus
ENSSPAG00000002906CPSF310088.116ENSAPOG00000022087cpsf310088.116Acanthochromis_polyacanthus
ENSSPAG00000002906CPSF39888.088ENSAMEG00000008493CPSF39988.088Ailuropoda_melanoleuca
ENSSPAG00000002906CPSF310094.976ENSACIG00000023663CPSF310094.976Amphilophus_citrinellus
ENSSPAG00000002906CPSF39986.349ENSACIG00000009846cpsf39986.349Amphilophus_citrinellus
ENSSPAG00000002906CPSF310098.841ENSAOCG00000010077CPSF310098.841Amphiprion_ocellaris
ENSSPAG00000002906CPSF310087.971ENSAOCG00000022056cpsf310089.650Amphiprion_ocellaris
ENSSPAG00000002906CPSF310088.116ENSAPEG00000019526cpsf39989.346Amphiprion_percula
ENSSPAG00000002906CPSF310098.841ENSAPEG00000021167CPSF310098.841Amphiprion_percula
ENSSPAG00000002906CPSF310090.145ENSATEG00000014525CPSF310090.145Anabas_testudineus
ENSSPAG00000002906CPSF39988.517ENSATEG00000003959cpsf39988.517Anabas_testudineus
ENSSPAG00000002906CPSF39787.332ENSAPLG00000006941CPSF39887.332Anas_platyrhynchos
ENSSPAG00000002906CPSF39983.043ENSACAG00000001759CPSF39984.882Anolis_carolinensis
ENSSPAG00000002906CPSF39882.353ENSANAG00000031254CPSF39982.759Aotus_nancymaae
ENSSPAG00000002906CPSF39987.700ENSACLG00000014484cpsf39988.554Astatotilapia_calliptera
ENSSPAG00000002906CPSF310095.604ENSACLG00000018846CPSF310095.604Astatotilapia_calliptera
ENSSPAG00000002906CPSF310089.275ENSAMXG00000004786cpsf310089.275Astyanax_mexicanus
ENSSPAG00000002906CPSF39888.088ENSBTAG00000019735CPSF39988.088Bos_taurus
ENSSPAG00000002906CPSF38957.911WBGene00013460cpsf-38957.911Caenorhabditis_elegans
ENSSPAG00000002906CPSF39887.647ENSCJAG00000006276CPSF39987.647Callithrix_jacchus
ENSSPAG00000002906CPSF39888.088ENSCAFG00000003375CPSF39588.088Canis_familiaris
ENSSPAG00000002906CPSF38990.747ENSCAFG00020026799CPSF39990.747Canis_lupus_dingo
ENSSPAG00000002906CPSF39888.088ENSCHIG00000013973CPSF39988.088Capra_hircus
ENSSPAG00000002906CPSF39887.794ENSTSYG00000002967CPSF39987.794Carlito_syrichta
ENSSPAG00000002906CPSF39986.032ENSCAPG00000013851CPSF39987.988Cavia_aperea
ENSSPAG00000002906CPSF39888.088ENSCPOG00000011299CPSF39988.088Cavia_porcellus
ENSSPAG00000002906CPSF39887.647ENSCCAG00000036730CPSF39987.647Cebus_capucinus
ENSSPAG00000002906CPSF39886.029ENSCATG00000014770CPSF39993.253Cercocebus_atys
ENSSPAG00000002906CPSF39887.941ENSCLAG00000002727CPSF39987.941Chinchilla_lanigera
ENSSPAG00000002906CPSF39879.853ENSCSAG00000007125CPSF39979.853Chlorocebus_sabaeus
ENSSPAG00000002906CPSF385100.000ENSCHOG00000000180CPSF38563.620Choloepus_hoffmanni
ENSSPAG00000002906CPSF39987.246ENSCPBG00000014074CPSF39987.246Chrysemys_picta_bellii
ENSSPAG00000002906CPSF39967.302ENSCING00000007214-9868.082Ciona_intestinalis
ENSSPAG00000002906CPSF39877.518ENSCANG00000034435CPSF39977.518Colobus_angolensis_palliatus
ENSSPAG00000002906CPSF39887.794ENSCGRG00001013134Cpsf39987.794Cricetulus_griseus_chok1gshd
ENSSPAG00000002906CPSF39887.794ENSCGRG00000018319Cpsf39987.794Cricetulus_griseus_crigri
ENSSPAG00000002906CPSF310093.488ENSCSEG00000002021CPSF310093.818Cynoglossus_semilaevis
ENSSPAG00000002906CPSF310096.232ENSCVAG00000015067CPSF310096.232Cyprinodon_variegatus
ENSSPAG00000002906CPSF310089.565ENSDARG00000027649cpsf310089.565Danio_rerio
ENSSPAG00000002906CPSF39887.078ENSDNOG00000008940CPSF39587.078Dasypus_novemcinctus
ENSSPAG00000002906CPSF39488.735ENSDORG00000014263Cpsf39988.735Dipodomys_ordii
ENSSPAG00000002906CPSF39966.181FBgn0261065Cpsf739966.181Drosophila_melanogaster
ENSSPAG00000002906CPSF39576.923ENSETEG00000003893CPSF39976.698Echinops_telfairi
ENSSPAG00000002906CPSF39975.915ENSEBUG00000009018cpsf39976.338Eptatretus_burgeri
ENSSPAG00000002906CPSF39888.088ENSEASG00005003970CPSF39988.088Equus_asinus_asinus
ENSSPAG00000002906CPSF39888.088ENSECAG00000019911CPSF39692.905Equus_caballus
ENSSPAG00000002906CPSF39872.647ENSEEUG00000015422CPSF39972.647Erinaceus_europaeus
ENSSPAG00000002906CPSF39990.843ENSELUG00000013775cpsf39990.843Esox_lucius
ENSSPAG00000002906CPSF39888.088ENSFCAG00000007852CPSF39988.088Felis_catus
ENSSPAG00000002906CPSF39985.079ENSFALG00000006572CPSF39987.152Ficedula_albicollis
ENSSPAG00000002906CPSF39887.334ENSFDAG00000006317CPSF39987.334Fukomys_damarensis
ENSSPAG00000002906CPSF39986.483ENSFHEG00000014774cpsf39986.483Fundulus_heteroclitus
ENSSPAG00000002906CPSF36378.049ENSFHEG00000012186CPSF310079.268Fundulus_heteroclitus
ENSSPAG00000002906CPSF310088.551ENSGMOG00000003157cpsf310088.551Gadus_morhua
ENSSPAG00000002906CPSF39986.483ENSGALG00000016424CPSF39986.483Gallus_gallus
ENSSPAG00000002906CPSF310095.652ENSGAFG00000008016CPSF310095.652Gambusia_affinis
ENSSPAG00000002906CPSF310086.169ENSGAFG00000019449cpsf310086.169Gambusia_affinis
ENSSPAG00000002906CPSF37383.512ENSGAGG00000025583CPSF39383.512Gopherus_agassizii
ENSSPAG00000002906CPSF39985.714ENSGGOG00000001757CPSF39198.065Gorilla_gorilla
ENSSPAG00000002906CPSF36392.040ENSHBUG00000014332CPSF310092.099Haplochromis_burtoni
ENSSPAG00000002906CPSF39988.372ENSHBUG00000001188cpsf39988.372Haplochromis_burtoni
ENSSPAG00000002906CPSF39887.629ENSHGLG00000000666CPSF39887.629Heterocephalus_glaber_female
ENSSPAG00000002906CPSF39887.629ENSHGLG00100007765CPSF39887.629Heterocephalus_glaber_male
ENSSPAG00000002906CPSF39986.502ENSHCOG00000007251cpsf39986.502Hippocampus_comes
ENSSPAG00000002906CPSF39994.194ENSHCOG00000015957CPSF39994.194Hippocampus_comes
ENSSPAG00000002906CPSF310089.130ENSIPUG00000023488cpsf310089.130Ictalurus_punctatus
ENSSPAG00000002906CPSF39887.941ENSSTOG00000004476CPSF39987.941Ictidomys_tridecemlineatus
ENSSPAG00000002906CPSF39887.353ENSJJAG00000023415Cpsf39987.353Jaculus_jaculus
ENSSPAG00000002906CPSF310097.971ENSKMAG00000007317CPSF310097.971Kryptolebias_marmoratus
ENSSPAG00000002906CPSF310086.232ENSKMAG00000002806cpsf310086.232Kryptolebias_marmoratus
ENSSPAG00000002906CPSF39981.831ENSLBEG00000020569cpsf39681.831Labrus_bergylta
ENSSPAG00000002906CPSF35982.880ENSLBEG00000015018-9982.880Labrus_bergylta
ENSSPAG00000002906CPSF39597.260ENSLBEG00000013492CPSF39997.260Labrus_bergylta
ENSSPAG00000002906CPSF310080.029ENSLACG00000008308CPSF310080.029Latimeria_chalumnae
ENSSPAG00000002906CPSF310090.476ENSLOCG00000016823cpsf310090.476Lepisosteus_oculatus
ENSSPAG00000002906CPSF39985.714ENSLAFG00000009467CPSF39986.598Loxodonta_africana
ENSSPAG00000002906CPSF39887.647ENSMFAG00000001339CPSF39495.000Macaca_fascicularis
ENSSPAG00000002906CPSF39985.556ENSMMUG00000018038CPSF39295.000Macaca_mulatta
ENSSPAG00000002906CPSF39993.500ENSMNEG00000039447CPSF39998.000Macaca_nemestrina
ENSSPAG00000002906CPSF39887.794ENSMLEG00000026825CPSF39298.060Mandrillus_leucophaeus
ENSSPAG00000002906CPSF39988.372ENSMAMG00000003076cpsf39988.372Mastacembelus_armatus
ENSSPAG00000002906CPSF310096.057ENSMAMG00000008835CPSF310096.057Mastacembelus_armatus
ENSSPAG00000002906CPSF310097.536ENSMZEG00005006258CPSF310097.536Maylandia_zebra
ENSSPAG00000002906CPSF39988.372ENSMZEG00005014358cpsf39988.372Maylandia_zebra
ENSSPAG00000002906CPSF39984.603ENSMGAG00000013995CPSF39986.937Meleagris_gallopavo
ENSSPAG00000002906CPSF35878.667ENSMAUG00000000166Cpsf39978.667Mesocricetus_auratus
ENSSPAG00000002906CPSF39882.916ENSMICG00000002363CPSF39982.916Microcebus_murinus
ENSSPAG00000002906CPSF39885.147ENSMOCG00000020067Cpsf39985.147Microtus_ochrogaster
ENSSPAG00000002906CPSF39981.935ENSMMOG00000018212CPSF39883.075Mola_mola
ENSSPAG00000002906CPSF37881.560ENSMMOG00000011923CPSF38581.560Mola_mola
ENSSPAG00000002906CPSF39887.191ENSMODG00000014703CPSF39987.191Monodelphis_domestica
ENSSPAG00000002906CPSF39692.939ENSMALG00000011474CPSF310090.952Monopterus_albus
ENSSPAG00000002906CPSF310088.696ENSMALG00000016416cpsf310088.696Monopterus_albus
ENSSPAG00000002906CPSF39887.500MGP_CAROLIEiJ_G0017640Cpsf39987.500Mus_caroli
ENSSPAG00000002906CPSF39887.500ENSMUSG00000054309Cpsf39698.305Mus_musculus
ENSSPAG00000002906CPSF39887.353MGP_PahariEiJ_G0029397Cpsf39987.353Mus_pahari
ENSSPAG00000002906CPSF39887.500MGP_SPRETEiJ_G0018481Cpsf39987.500Mus_spretus
ENSSPAG00000002906CPSF39888.071ENSMPUG00000013213CPSF39988.071Mustela_putorius_furo
ENSSPAG00000002906CPSF39887.959ENSMLUG00000010636CPSF39987.959Myotis_lucifugus
ENSSPAG00000002906CPSF39887.647ENSNGAG00000019836Cpsf39987.647Nannospalax_galili
ENSSPAG00000002906CPSF39987.791ENSNBRG00000004770cpsf39987.791Neolamprologus_brichardi
ENSSPAG00000002906CPSF310095.604ENSNBRG00000010525CPSF310095.604Neolamprologus_brichardi
ENSSPAG00000002906CPSF39887.647ENSNLEG00000013359CPSF39198.065Nomascus_leucogenys
ENSSPAG00000002906CPSF39857.353ENSMEUG00000013117-9957.353Notamacropus_eugenii
ENSSPAG00000002906CPSF39879.234ENSOPRG00000008902CPSF39979.234Ochotona_princeps
ENSSPAG00000002906CPSF39888.088ENSODEG00000003129CPSF39988.088Octodon_degus
ENSSPAG00000002906CPSF39988.663ENSONIG00000018812cpsf39988.663Oreochromis_niloticus
ENSSPAG00000002906CPSF38886.323ENSOANG00000008577CPSF39986.323Ornithorhynchus_anatinus
ENSSPAG00000002906CPSF39887.794ENSOCUG00000003728CPSF39987.794Oryctolagus_cuniculus
ENSSPAG00000002906CPSF39986.483ENSORLG00000018854cpsf39986.483Oryzias_latipes
ENSSPAG00000002906CPSF39986.337ENSORLG00020013331cpsf39986.337Oryzias_latipes_hni
ENSSPAG00000002906CPSF39986.483ENSORLG00015011017cpsf39986.483Oryzias_latipes_hsok
ENSSPAG00000002906CPSF39986.919ENSOMEG00000010647cpsf39586.919Oryzias_melastigma
ENSSPAG00000002906CPSF39877.647ENSOGAG00000001680CPSF39977.647Otolemur_garnettii
ENSSPAG00000002906CPSF39888.088ENSOARG00000015073CPSF39988.088Ovis_aries
ENSSPAG00000002906CPSF39887.794ENSPPAG00000042457CPSF39198.065Pan_paniscus
ENSSPAG00000002906CPSF39888.088ENSPPRG00000016790CPSF39988.088Panthera_pardus
ENSSPAG00000002906CPSF39888.218ENSPTIG00000003920CPSF39988.218Panthera_tigris_altaica
ENSSPAG00000002906CPSF39887.794ENSPTRG00000011638CPSF39198.065Pan_troglodytes
ENSSPAG00000002906CPSF39887.647ENSPANG00000016798CPSF39495.000Papio_anubis
ENSSPAG00000002906CPSF310091.159ENSPKIG00000023646cpsf310091.159Paramormyrops_kingsleyae
ENSSPAG00000002906CPSF39886.784ENSPSIG00000016144CPSF39986.784Pelodiscus_sinensis
ENSSPAG00000002906CPSF310083.254ENSPMGG00000006141-10083.254Periophthalmus_magnuspinnatus
ENSSPAG00000002906CPSF36390.524ENSPMGG00000015311CPSF310090.524Periophthalmus_magnuspinnatus
ENSSPAG00000002906CPSF39888.088ENSPEMG00000017668Cpsf39988.088Peromyscus_maniculatus_bairdii
ENSSPAG00000002906CPSF37989.541ENSPMAG00000004841cpsf310089.541Petromyzon_marinus
ENSSPAG00000002906CPSF39985.556ENSPCIG00000009823CPSF39888.344Phascolarctos_cinereus
ENSSPAG00000002906CPSF310095.072ENSPFOG00000010418-10095.072Poecilia_formosa
ENSSPAG00000002906CPSF310086.377ENSPFOG00000015922cpsf310086.377Poecilia_formosa
ENSSPAG00000002906CPSF310086.377ENSPLAG00000000882cpsf310086.377Poecilia_latipinna
ENSSPAG00000002906CPSF36390.864ENSPLAG00000021300-10092.840Poecilia_latipinna
ENSSPAG00000002906CPSF310086.522ENSPMEG00000018309cpsf310086.522Poecilia_mexicana
ENSSPAG00000002906CPSF310087.971ENSPREG00000004482CPSF310087.971Poecilia_reticulata
ENSSPAG00000002906CPSF310086.624ENSPREG00000014875cpsf310086.624Poecilia_reticulata
ENSSPAG00000002906CPSF39883.529ENSPPYG00000012666CPSF39983.529Pongo_abelii
ENSSPAG00000002906CPSF38564.865ENSPCAG00000015042CPSF38965.725Procavia_capensis
ENSSPAG00000002906CPSF38690.323ENSPCOG00000023016CPSF39790.323Propithecus_coquereli
ENSSPAG00000002906CPSF39887.923ENSPVAG00000005324CPSF39987.923Pteropus_vampyrus
ENSSPAG00000002906CPSF38898.182ENSPNYG00000021047CPSF39298.182Pundamilia_nyererei
ENSSPAG00000002906CPSF39988.372ENSPNYG00000004405cpsf39988.372Pundamilia_nyererei
ENSSPAG00000002906CPSF310089.565ENSPNAG00000023060cpsf310089.565Pygocentrus_nattereri
ENSSPAG00000002906CPSF39987.225ENSRNOG00000052418Cpsf39987.225Rattus_norvegicus
ENSSPAG00000002906CPSF39981.991ENSRBIG00000041615CPSF39983.513Rhinopithecus_bieti
ENSSPAG00000002906CPSF39887.794ENSRROG00000033792CPSF39987.794Rhinopithecus_roxellana
ENSSPAG00000002906CPSF38641.774YLR277CYSH18543.182Saccharomyces_cerevisiae
ENSSPAG00000002906CPSF39982.019ENSSBOG00000027263CPSF39784.179Saimiri_boliviensis_boliviensis
ENSSPAG00000002906CPSF39887.941ENSSHAG00000007024CPSF39987.941Sarcophilus_harrisii
ENSSPAG00000002906CPSF310090.870ENSSFOG00015002108cpsf310090.870Scleropages_formosus
ENSSPAG00000002906CPSF39594.064ENSSMAG00000020534CPSF39794.064Scophthalmus_maximus
ENSSPAG00000002906CPSF310097.681ENSSDUG00000018498CPSF310097.681Seriola_dumerili
ENSSPAG00000002906CPSF39988.372ENSSDUG00000002828cpsf39788.372Seriola_dumerili
ENSSPAG00000002906CPSF310097.681ENSSLDG00000005234CPSF310097.681Seriola_lalandi_dorsalis
ENSSPAG00000002906CPSF310088.261ENSSLDG00000008469cpsf39788.261Seriola_lalandi_dorsalis
ENSSPAG00000002906CPSF38983.992ENSSARG00000005186CPSF39083.992Sorex_araneus
ENSSPAG00000002906CPSF39983.123ENSSPUG00000015525CPSF39785.522Sphenodon_punctatus
ENSSPAG00000002906CPSF39888.088ENSSSCG00000020799CPSF39988.088Sus_scrofa
ENSSPAG00000002906CPSF39987.116ENSTGUG00000013016CPSF39987.116Taeniopygia_guttata
ENSSPAG00000002906CPSF39987.209ENSTRUG00000007030cpsf39887.209Takifugu_rubripes
ENSSPAG00000002906CPSF36380.100ENSTRUG00000013905CPSF310080.100Takifugu_rubripes
ENSSPAG00000002906CPSF38491.989ENSTBEG00000002707CPSF38491.989Tupaia_belangeri
ENSSPAG00000002906CPSF38674.939ENSTTRG00000000861CPSF38774.939Tursiops_truncatus
ENSSPAG00000002906CPSF39588.720ENSUAMG00000007535CPSF39488.720Ursus_americanus
ENSSPAG00000002906CPSF39986.032ENSUMAG00000003676CPSF39492.652Ursus_maritimus
ENSSPAG00000002906CPSF39585.619ENSVPAG00000008041CPSF310087.855Vicugna_pacos
ENSSPAG00000002906CPSF39888.088ENSVVUG00000002194CPSF39988.088Vulpes_vulpes
ENSSPAG00000002906CPSF39985.922ENSXETG00000008263cpsf39985.922Xenopus_tropicalis
ENSSPAG00000002906CPSF310086.667ENSXCOG00000019695cpsf310086.667Xiphophorus_couchianus
ENSSPAG00000002906CPSF35889.785ENSXCOG00000000957-8791.935Xiphophorus_couchianus
ENSSPAG00000002906CPSF310095.362ENSXMAG00000027291CPSF310095.362Xiphophorus_maculatus
ENSSPAG00000002906CPSF310086.522ENSXMAG00000009784cpsf310086.522Xiphophorus_maculatus

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