EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000003300 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 6481 bases
Position: chrKK581149.1:241522-248002
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000004275	MMR_HSR1	PF01926.23	7.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000004364	-	765	-	ENSSPAP00000004275	254 (aa)	-	-

Gene Model

Click here to download ENSSPAG00000003300's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000003300's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000003300	-	88	39.381	ENSSPAG00000015996	-	84	39.381

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000003300	-	86	40.271	ENSAPOG00000006213	-	74	40.271	Acanthochromis_polyacanthus
ENSSPAG00000003300	-	76	43.814	ENSACIG00000014950	-	82	43.814	Amphilophus_citrinellus
ENSSPAG00000003300	-	87	42.609	ENSACIG00000023712	-	56	42.609	Amphilophus_citrinellus
ENSSPAG00000003300	-	83	70.561	ENSATEG00000008595	-	77	70.561	Anabas_testudineus
ENSSPAG00000003300	-	78	79.899	ENSACLG00000023033	-	51	79.899	Astatotilapia_calliptera
ENSSPAG00000003300	-	87	44.444	ENSACLG00000015361	-	55	44.444	Astatotilapia_calliptera
ENSSPAG00000003300	-	81	44.131	ENSAMXG00000030535	-	53	43.784	Astyanax_mexicanus
ENSSPAG00000003300	-	90	43.103	ENSCVAG00000022669	-	81	43.103	Cyprinodon_variegatus
ENSSPAG00000003300	-	79	48.020	ENSCVAG00000014791	-	55	48.020	Cyprinodon_variegatus
ENSSPAG00000003300	-	88	40.265	ENSCVAG00000022676	-	66	40.265	Cyprinodon_variegatus
ENSSPAG00000003300	-	88	43.226	ENSCVAG00000007794	-	50	43.226	Cyprinodon_variegatus
ENSSPAG00000003300	-	90	39.914	ENSDARG00000076398	si:dkey-201l21.4	57	39.914	Danio_rerio
ENSSPAG00000003300	-	84	42.326	ENSDARG00000100858	zgc:171695	50	42.326	Danio_rerio
ENSSPAG00000003300	-	88	43.421	ENSDARG00000039888	CR855393.1	63	43.421	Danio_rerio
ENSSPAG00000003300	-	80	38.235	ENSELUG00000008413	-	53	37.327	Esox_lucius
ENSSPAG00000003300	-	86	38.739	ENSFHEG00000002160	-	70	38.739	Fundulus_heteroclitus
ENSSPAG00000003300	-	64	69.325	ENSGMOG00000020208	-	90	69.325	Gadus_morhua
ENSSPAG00000003300	-	65	68.072	ENSGMOG00000019744	-	93	68.072	Gadus_morhua
ENSSPAG00000003300	-	73	70.430	ENSGMOG00000019786	-	91	70.430	Gadus_morhua
ENSSPAG00000003300	-	74	68.984	ENSGMOG00000008232	-	55	69.355	Gadus_morhua
ENSSPAG00000003300	-	77	71.795	ENSGMOG00000020059	-	94	71.795	Gadus_morhua
ENSSPAG00000003300	-	84	38.140	ENSGAFG00000005050	-	82	38.140	Gambusia_affinis
ENSSPAG00000003300	-	91	74.138	ENSGAFG00000018470	-	90	74.138	Gambusia_affinis
ENSSPAG00000003300	-	88	39.823	ENSGACG00000015437	-	56	39.823	Gasterosteus_aculeatus
ENSSPAG00000003300	-	74	74.603	ENSGACG00000015787	-	87	74.603	Gasterosteus_aculeatus
ENSSPAG00000003300	-	89	41.485	ENSGACG00000005035	-	57	41.485	Gasterosteus_aculeatus
ENSSPAG00000003300	-	86	42.727	ENSHBUG00000007413	-	87	42.727	Haplochromis_burtoni
ENSSPAG00000003300	-	81	43.750	ENSHBUG00000023729	-	55	43.750	Haplochromis_burtoni
ENSSPAG00000003300	-	86	42.342	ENSIPUG00000013512	-	53	42.342	Ictalurus_punctatus
ENSSPAG00000003300	-	82	43.541	ENSIPUG00000000082	-	88	43.541	Ictalurus_punctatus
ENSSPAG00000003300	-	88	43.668	ENSIPUG00000009201	-	89	43.668	Ictalurus_punctatus
ENSSPAG00000003300	-	89	38.158	ENSLBEG00000019795	-	94	38.158	Labrus_bergylta
ENSSPAG00000003300	-	87	71.171	ENSLBEG00000012781	-	85	71.171	Labrus_bergylta
ENSSPAG00000003300	-	86	75.113	ENSLBEG00000028432	-	84	75.113	Labrus_bergylta
ENSSPAG00000003300	-	86	57.727	ENSLOCG00000017620	-	64	57.727	Lepisosteus_oculatus
ENSSPAG00000003300	-	81	70.388	ENSMAMG00000015204	-	82	70.388	Mastacembelus_armatus
ENSSPAG00000003300	-	79	45.050	ENSMZEG00005023315	-	51	45.050	Maylandia_zebra
ENSSPAG00000003300	-	81	44.231	ENSMZEG00005023309	-	55	44.231	Maylandia_zebra
ENSSPAG00000003300	-	81	44.231	ENSMZEG00005004397	-	71	44.231	Maylandia_zebra
ENSSPAG00000003300	-	90	40.426	ENSMMOG00000015162	-	90	40.426	Mola_mola
ENSSPAG00000003300	-	91	41.880	ENSMMOG00000011295	-	83	41.880	Mola_mola
ENSSPAG00000003300	-	79	45.854	ENSNBRG00000006565	-	65	45.854	Neolamprologus_brichardi
ENSSPAG00000003300	-	95	38.272	ENSONIG00000013895	-	94	38.272	Oreochromis_niloticus
ENSSPAG00000003300	-	90	42.918	ENSONIG00000017927	-	68	42.918	Oreochromis_niloticus
ENSSPAG00000003300	-	90	37.391	ENSONIG00000013617	-	54	37.391	Oreochromis_niloticus
ENSSPAG00000003300	-	89	52.609	ENSPMGG00000016292	-	55	52.609	Periophthalmus_magnuspinnatus
ENSSPAG00000003300	-	80	33.175	ENSPMGG00000008676	-	57	33.175	Periophthalmus_magnuspinnatus
ENSSPAG00000003300	-	89	39.207	ENSPMGG00000016798	-	55	39.207	Periophthalmus_magnuspinnatus
ENSSPAG00000003300	-	91	41.026	ENSPMGG00000002690	-	64	41.026	Periophthalmus_magnuspinnatus
ENSSPAG00000003300	-	92	40.417	ENSPMGG00000020583	-	57	40.417	Periophthalmus_magnuspinnatus
ENSSPAG00000003300	-	89	42.795	ENSPLAG00000019926	-	81	42.795	Poecilia_latipinna
ENSSPAG00000003300	-	89	40.529	ENSPREG00000007255	-	55	40.529	Poecilia_reticulata
ENSSPAG00000003300	-	91	79.221	ENSPNYG00000016575	-	78	79.221	Pundamilia_nyererei
ENSSPAG00000003300	-	80	34.804	ENSPNAG00000011130	-	68	34.804	Pygocentrus_nattereri
ENSSPAG00000003300	-	86	58.824	ENSSDUG00000005919	-	76	58.824	Seriola_dumerili
ENSSPAG00000003300	-	78	63.819	ENSSDUG00000000316	-	82	63.819	Seriola_dumerili
ENSSPAG00000003300	-	89	58.150	ENSSDUG00000000370	-	89	58.150	Seriola_dumerili
ENSSPAG00000003300	-	78	43.284	ENSSDUG00000021349	-	86	43.284	Seriola_dumerili
ENSSPAG00000003300	-	87	42.411	ENSSLDG00000018054	-	90	42.411	Seriola_lalandi_dorsalis
ENSSPAG00000003300	-	86	74.312	ENSSLDG00000017661	-	94	74.312	Seriola_lalandi_dorsalis
ENSSPAG00000003300	-	88	41.333	ENSTRUG00000021059	-	82	41.333	Takifugu_rubripes
ENSSPAG00000003300	-	81	43.269	ENSTRUG00000017314	-	87	43.269	Takifugu_rubripes
ENSSPAG00000003300	-	91	43.534	ENSTRUG00000001460	-	70	43.534	Takifugu_rubripes
ENSSPAG00000003300	-	91	41.379	ENSTNIG00000006523	-	58	41.379	Tetraodon_nigroviridis
ENSSPAG00000003300	-	87	44.643	ENSTNIG00000005878	-	58	44.643	Tetraodon_nigroviridis
ENSSPAG00000003300	-	90	42.424	ENSTNIG00000003332	-	58	42.424	Tetraodon_nigroviridis
ENSSPAG00000003300	-	87	43.304	ENSXCOG00000001022	-	55	43.363	Xiphophorus_couchianus