EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000003910 (Gene tree)
Gene ID: 103363333
Gene Symbol: larp1
Alias: wu:fb92d03|wu:fd15e07
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 59105 bases
Position: chrKK580724.1:213146-272250
Accession: 103363333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000005075	La	PF05383.17	3.2e-21	1	1
ENSSPAP00000005048	La	PF05383.17	3.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000005173	-	4200	XM_008290051	ENSSPAP00000005075	1082 (aa)	XP_008288273	UPI0004952E8D
ENSSPAT00000005144	-	4272	XM_008290048	ENSSPAP00000005048	1106 (aa)	XP_008288270	UPI000497B6AF

Gene Model

Click here to download ENSSPAG00000003910's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000003910's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000003910	larp1	93	51.689	ENSSPAG00000017772	larp1b	91	53.243

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000003910	larp1	87	67.546	ENSG00000155506	LARP1	90	81.212	Homo_sapiens
ENSSPAG00000003910	larp1	88	97.235	ENSAPOG00000020685	larp1	99	97.235	Acanthochromis_polyacanthus
ENSSPAG00000003910	larp1	87	68.219	ENSAMEG00000016673	LARP1	99	68.191	Ailuropoda_melanoleuca
ENSSPAG00000003910	larp1	100	82.117	ENSACIG00000012994	larp1	100	81.387	Amphilophus_citrinellus
ENSSPAG00000003910	larp1	78	96.349	ENSAOCG00000007792	larp1	100	96.349	Amphiprion_ocellaris
ENSSPAG00000003910	larp1	100	95.027	ENSAPEG00000022246	larp1	100	95.027	Amphiprion_percula
ENSSPAG00000003910	larp1	99	89.412	ENSATEG00000013523	larp1	100	90.828	Anabas_testudineus
ENSSPAG00000003910	larp1	82	71.987	ENSAPLG00000007559	LARP1	99	72.204	Anas_platyrhynchos
ENSSPAG00000003910	larp1	87	69.192	ENSACAG00000004071	LARP1	98	71.021	Anolis_carolinensis
ENSSPAG00000003910	larp1	87	67.308	ENSANAG00000029949	LARP1	99	65.213	Aotus_nancymaae
ENSSPAG00000003910	larp1	100	91.079	ENSACLG00000015256	larp1	99	93.414	Astatotilapia_calliptera
ENSSPAG00000003910	larp1	99	76.710	ENSAMXG00000000859	larp1	99	76.802	Astyanax_mexicanus
ENSSPAG00000003910	larp1	97	64.727	ENSBTAG00000008443	LARP1	99	64.362	Bos_taurus
ENSSPAG00000003910	larp1	99	63.564	ENSCJAG00000004454	LARP1	99	63.741	Callithrix_jacchus
ENSSPAG00000003910	larp1	87	68.191	ENSCAFG00000017639	LARP1	99	68.191	Canis_familiaris
ENSSPAG00000003910	larp1	81	69.880	ENSCAFG00020023860	LARP1	99	69.880	Canis_lupus_dingo
ENSSPAG00000003910	larp1	99	63.153	ENSCHIG00000014414	LARP1	99	62.916	Capra_hircus
ENSSPAG00000003910	larp1	87	68.126	ENSTSYG00000013732	LARP1	99	65.545	Carlito_syrichta
ENSSPAG00000003910	larp1	77	69.186	ENSCAPG00000013865	LARP1	85	67.093	Cavia_aperea
ENSSPAG00000003910	larp1	85	69.351	ENSCPOG00000003377	LARP1	97	69.062	Cavia_porcellus
ENSSPAG00000003910	larp1	99	63.354	ENSCCAG00000025201	LARP1	99	63.652	Cebus_capucinus
ENSSPAG00000003910	larp1	99	61.180	ENSCATG00000030675	LARP1	93	67.617	Cercocebus_atys
ENSSPAG00000003910	larp1	87	68.325	ENSCLAG00000012755	LARP1	99	66.531	Chinchilla_lanigera
ENSSPAG00000003910	larp1	81	66.630	ENSCSAG00000010800	LARP1	98	66.923	Chlorocebus_sabaeus
ENSSPAG00000003910	larp1	83	64.747	ENSCHOG00000012716	LARP1	91	64.731	Choloepus_hoffmanni
ENSSPAG00000003910	larp1	90	72.144	ENSCPBG00000002173	LARP1	93	72.378	Chrysemys_picta_bellii
ENSSPAG00000003910	larp1	87	67.923	ENSCANG00000037418	LARP1	93	67.821	Colobus_angolensis_palliatus
ENSSPAG00000003910	larp1	99	63.693	ENSCGRG00001016913	Larp1	99	63.971	Cricetulus_griseus_chok1gshd
ENSSPAG00000003910	larp1	85	64.828	ENSCGRG00000009916	Larp1	99	65.781	Cricetulus_griseus_crigri
ENSSPAG00000003910	larp1	100	88.349	ENSCSEG00000016431	larp1	100	88.991	Cynoglossus_semilaevis
ENSSPAG00000003910	larp1	98	86.098	ENSCVAG00000022687	larp1	100	87.158	Cyprinodon_variegatus
ENSSPAG00000003910	larp1	99	69.116	ENSDARG00000101722	larp1	96	73.679	Danio_rerio
ENSSPAG00000003910	larp1	99	63.524	ENSDNOG00000012073	LARP1	99	63.475	Dasypus_novemcinctus
ENSSPAG00000003910	larp1	87	65.443	ENSDORG00000002897	Larp1	98	65.443	Dipodomys_ordii
ENSSPAG00000003910	larp1	81	70.175	ENSETEG00000020251	LARP1	100	68.092	Echinops_telfairi
ENSSPAG00000003910	larp1	99	63.894	ENSEASG00005001070	LARP1	99	63.717	Equus_asinus_asinus
ENSSPAG00000003910	larp1	97	64.679	ENSECAG00000017002	LARP1	78	65.038	Equus_caballus
ENSSPAG00000003910	larp1	85	64.412	ENSEEUG00000001065	LARP1	99	65.140	Erinaceus_europaeus
ENSSPAG00000003910	larp1	99	78.396	ENSELUG00000019403	larp1	99	78.760	Esox_lucius
ENSSPAG00000003910	larp1	99	63.837	ENSFCAG00000000592	LARP1	99	63.749	Felis_catus
ENSSPAG00000003910	larp1	77	73.325	ENSFALG00000008335	LARP1	99	71.680	Ficedula_albicollis
ENSSPAG00000003910	larp1	87	68.196	ENSFDAG00000021125	LARP1	99	68.094	Fukomys_damarensis
ENSSPAG00000003910	larp1	64	78.917	ENSFHEG00000020307	larp1	97	78.551	Fundulus_heteroclitus
ENSSPAG00000003910	larp1	99	67.763	ENSGALG00000040109	LARP1	97	70.174	Gallus_gallus
ENSSPAG00000003910	larp1	99	67.931	ENSGAGG00000025113	LARP1	97	73.760	Gopherus_agassizii
ENSSPAG00000003910	larp1	89	65.815	ENSGGOG00000006048	LARP1	94	66.834	Gorilla_gorilla
ENSSPAG00000003910	larp1	100	91.067	ENSHBUG00000020762	larp1	99	93.212	Haplochromis_burtoni
ENSSPAG00000003910	larp1	99	63.540	ENSHGLG00000006267	LARP1	99	63.612	Heterocephalus_glaber_female
ENSSPAG00000003910	larp1	87	68.126	ENSHGLG00100014230	-	99	67.923	Heterocephalus_glaber_male
ENSSPAG00000003910	larp1	89	58.460	ENSHGLG00100003395	-	89	58.477	Heterocephalus_glaber_male
ENSSPAG00000003910	larp1	88	93.888	ENSHCOG00000010786	larp1	99	91.509	Hippocampus_comes
ENSSPAG00000003910	larp1	89	75.723	ENSIPUG00000019105	Larp1	95	76.860	Ictalurus_punctatus
ENSSPAG00000003910	larp1	87	65.545	ENSSTOG00000005678	LARP1	99	65.647	Ictidomys_tridecemlineatus
ENSSPAG00000003910	larp1	99	59.946	ENSJJAG00000016950	Larp1	99	60.271	Jaculus_jaculus
ENSSPAG00000003910	larp1	100	87.923	ENSKMAG00000018468	larp1	99	90.467	Kryptolebias_marmoratus
ENSSPAG00000003910	larp1	100	88.441	ENSLBEG00000027172	larp1	100	88.262	Labrus_bergylta
ENSSPAG00000003910	larp1	94	76.436	ENSLOCG00000012457	larp1	99	76.796	Lepisosteus_oculatus
ENSSPAG00000003910	larp1	99	63.238	ENSLAFG00000008991	LARP1	99	63.148	Loxodonta_africana
ENSSPAG00000003910	larp1	87	67.444	ENSMFAG00000031651	LARP1	93	67.515	Macaca_fascicularis
ENSSPAG00000003910	larp1	87	64.903	ENSMMUG00000009411	LARP1	99	65.169	Macaca_mulatta
ENSSPAG00000003910	larp1	83	68.056	ENSMNEG00000039294	LARP1	99	69.155	Macaca_nemestrina
ENSSPAG00000003910	larp1	87	67.647	ENSMLEG00000035142	LARP1	93	67.719	Mandrillus_leucophaeus
ENSSPAG00000003910	larp1	100	91.269	ENSMAMG00000021788	larp1	100	91.179	Mastacembelus_armatus
ENSSPAG00000003910	larp1	100	91.079	ENSMZEG00005009345	larp1	99	93.414	Maylandia_zebra
ENSSPAG00000003910	larp1	87	71.074	ENSMGAG00000005696	LARP1	99	69.525	Meleagris_gallopavo
ENSSPAG00000003910	larp1	98	64.420	ENSMAUG00000001385	Larp1	99	63.931	Mesocricetus_auratus
ENSSPAG00000003910	larp1	87	66.902	ENSMICG00000000837	LARP1	99	69.627	Microcebus_murinus
ENSSPAG00000003910	larp1	98	64.395	ENSMOCG00000008920	Larp1	99	64.061	Microtus_ochrogaster
ENSSPAG00000003910	larp1	95	67.293	ENSMMOG00000013364	larp1	99	68.703	Mola_mola
ENSSPAG00000003910	larp1	87	69.082	ENSMODG00000008663	LARP1	98	69.507	Monodelphis_domestica
ENSSPAG00000003910	larp1	100	89.068	ENSMALG00000017180	larp1	100	88.710	Monopterus_albus
ENSSPAG00000003910	larp1	98	64.923	MGP_CAROLIEiJ_G0016383	Larp1	99	64.420	Mus_caroli
ENSSPAG00000003910	larp1	98	65.014	ENSMUSG00000037331	Larp1	99	64.510	Mus_musculus
ENSSPAG00000003910	larp1	98	64.690	MGP_PahariEiJ_G0017518	Larp1	99	64.273	Mus_pahari
ENSSPAG00000003910	larp1	98	64.923	MGP_SPRETEiJ_G0017225	Larp1	99	64.510	Mus_spretus
ENSSPAG00000003910	larp1	82	61.702	ENSMPUG00000013564	LARP1	99	61.473	Mustela_putorius_furo
ENSSPAG00000003910	larp1	87	64.939	ENSMLUG00000002608	LARP1	99	65.377	Myotis_lucifugus
ENSSPAG00000003910	larp1	86	66.701	ENSNGAG00000001098	Larp1	98	65.714	Nannospalax_galili
ENSSPAG00000003910	larp1	91	89.362	ENSNBRG00000008963	larp1	98	89.564	Neolamprologus_brichardi
ENSSPAG00000003910	larp1	87	66.667	ENSNLEG00000016588	LARP1	99	65.596	Nomascus_leucogenys
ENSSPAG00000003910	larp1	87	65.325	ENSMEUG00000002957	LARP1	99	65.119	Notamacropus_eugenii
ENSSPAG00000003910	larp1	86	68.233	ENSOPRG00000013014	LARP1	99	68.205	Ochotona_princeps
ENSSPAG00000003910	larp1	88	67.269	ENSODEG00000010824	LARP1	99	67.923	Octodon_degus
ENSSPAG00000003910	larp1	99	86.625	ENSONIG00000017308	larp1	100	86.984	Oreochromis_niloticus
ENSSPAG00000003910	larp1	90	69.361	ENSOANG00000005096	LARP1	99	69.492	Ornithorhynchus_anatinus
ENSSPAG00000003910	larp1	99	63.936	ENSOCUG00000013066	LARP1	99	64.279	Oryctolagus_cuniculus
ENSSPAG00000003910	larp1	100	85.991	ENSORLG00000000824	larp1	100	85.505	Oryzias_latipes
ENSSPAG00000003910	larp1	100	85.753	ENSORLG00020022241	larp1	100	85.754	Oryzias_latipes_hni
ENSSPAG00000003910	larp1	100	84.608	ENSORLG00015007538	larp1	100	85.727	Oryzias_latipes_hsok
ENSSPAG00000003910	larp1	100	84.332	ENSOMEG00000003134	larp1	100	85.622	Oryzias_melastigma
ENSSPAG00000003910	larp1	87	67.923	ENSOGAG00000016750	LARP1	99	67.719	Otolemur_garnettii
ENSSPAG00000003910	larp1	87	66.395	ENSOARG00000009893	LARP1	99	66.667	Ovis_aries
ENSSPAG00000003910	larp1	87	67.546	ENSPPAG00000042993	LARP1	93	67.617	Pan_paniscus
ENSSPAG00000003910	larp1	87	66.633	ENSPPRG00000009780	LARP1	94	66.124	Panthera_pardus
ENSSPAG00000003910	larp1	87	66.836	ENSPTIG00000007013	LARP1	94	66.633	Panthera_tigris_altaica
ENSSPAG00000003910	larp1	99	61.131	ENSPTRG00000017447	LARP1	93	67.548	Pan_troglodytes
ENSSPAG00000003910	larp1	99	61.180	ENSPANG00000008080	LARP1	93	67.617	Papio_anubis
ENSSPAG00000003910	larp1	99	67.763	ENSPKIG00000017153	-	99	69.149	Paramormyrops_kingsleyae
ENSSPAG00000003910	larp1	99	76.524	ENSPKIG00000010096	larp1	99	77.042	Paramormyrops_kingsleyae
ENSSPAG00000003910	larp1	95	80.077	ENSPMGG00000011599	larp1	98	80.174	Periophthalmus_magnuspinnatus
ENSSPAG00000003910	larp1	87	65.944	ENSPEMG00000022523	Larp1	99	65.408	Peromyscus_maniculatus_bairdii
ENSSPAG00000003910	larp1	97	67.069	ENSPCIG00000019242	LARP1	89	66.883	Phascolarctos_cinereus
ENSSPAG00000003910	larp1	100	84.300	ENSPFOG00000005836	larp1	100	83.779	Poecilia_formosa
ENSSPAG00000003910	larp1	100	84.503	ENSPLAG00000008936	larp1	100	84.153	Poecilia_latipinna
ENSSPAG00000003910	larp1	100	84.032	ENSPMEG00000013656	larp1	100	83.512	Poecilia_mexicana
ENSSPAG00000003910	larp1	88	86.120	ENSPREG00000005726	larp1	99	86.120	Poecilia_reticulata
ENSSPAG00000003910	larp1	85	66.457	ENSPCAG00000006407	LARP1	97	65.199	Procavia_capensis
ENSSPAG00000003910	larp1	87	60.998	ENSPCOG00000016949	LARP1	99	63.646	Propithecus_coquereli
ENSSPAG00000003910	larp1	97	64.531	ENSPVAG00000002262	LARP1	98	64.516	Pteropus_vampyrus
ENSSPAG00000003910	larp1	100	91.249	ENSPNYG00000007938	larp1	99	93.414	Pundamilia_nyererei
ENSSPAG00000003910	larp1	99	75.978	ENSPNAG00000021427	larp1	99	77.404	Pygocentrus_nattereri
ENSSPAG00000003910	larp1	87	64.859	ENSRNOG00000031544	Larp1	98	65.779	Rattus_norvegicus
ENSSPAG00000003910	larp1	87	67.647	ENSRBIG00000038005	LARP1	93	67.719	Rhinopithecus_bieti
ENSSPAG00000003910	larp1	87	67.647	ENSRROG00000034073	LARP1	99	69.374	Rhinopithecus_roxellana
ENSSPAG00000003910	larp1	90	66.178	ENSSBOG00000019816	LARP1	99	65.341	Saimiri_boliviensis_boliviensis
ENSSPAG00000003910	larp1	87	70.298	ENSSHAG00000011115	LARP1	99	70.298	Sarcophilus_harrisii
ENSSPAG00000003910	larp1	88	77.980	ENSSFOG00015020304	larp1	95	77.656	Scleropages_formosus
ENSSPAG00000003910	larp1	99	73.543	ENSSFOG00015018058	-	97	74.788	Scleropages_formosus
ENSSPAG00000003910	larp1	94	86.523	ENSSMAG00000007468	larp1	98	86.719	Scophthalmus_maximus
ENSSPAG00000003910	larp1	100	93.381	ENSSDUG00000000268	larp1	100	93.113	Seriola_dumerili
ENSSPAG00000003910	larp1	83	86.711	ENSSLDG00000016505	larp1	99	86.379	Seriola_lalandi_dorsalis
ENSSPAG00000003910	larp1	57	77.580	ENSSARG00000013907	-	88	78.648	Sorex_araneus
ENSSPAG00000003910	larp1	99	65.841	ENSSPUG00000012179	-	99	66.519	Sphenodon_punctatus
ENSSPAG00000003910	larp1	99	63.363	ENSSSCG00000017069	LARP1	99	68.838	Sus_scrofa
ENSSPAG00000003910	larp1	84	72.081	ENSTGUG00000000704	LARP1	100	72.216	Taeniopygia_guttata
ENSSPAG00000003910	larp1	99	87.238	ENSTRUG00000009470	larp1	99	87.329	Takifugu_rubripes
ENSSPAG00000003910	larp1	82	68.231	ENSTBEG00000003381	LARP1	99	66.953	Tupaia_belangeri
ENSSPAG00000003910	larp1	86	67.798	ENSTTRG00000015934	LARP1	99	67.821	Tursiops_truncatus
ENSSPAG00000003910	larp1	99	63.877	ENSUAMG00000019334	LARP1	99	63.572	Ursus_americanus
ENSSPAG00000003910	larp1	85	67.294	ENSUMAG00000002934	LARP1	96	69.077	Ursus_maritimus
ENSSPAG00000003910	larp1	81	69.880	ENSVVUG00000004644	LARP1	99	69.880	Vulpes_vulpes
ENSSPAG00000003910	larp1	93	70.265	ENSXETG00000008413	larp1	96	70.305	Xenopus_tropicalis
ENSSPAG00000003910	larp1	87	81.889	ENSXCOG00000004022	larp1	99	81.865	Xiphophorus_couchianus
ENSSPAG00000003910	larp1	100	84.018	ENSXMAG00000018780	larp1	100	83.839	Xiphophorus_maculatus