EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000003983 (Gene tree)
Gene ID: 103356545
Gene Symbol: -
Alias: -
Full Name: RNA binding motif single stranded interacting protein 3
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 296606 bases
Position: chrKK580077.1:601037-897642
Accession: 103356545
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000005274	RRM_1	PF00076.22	2.5e-31	1	2
ENSSPAP00000005274	RRM_1	PF00076.22	2.5e-31	2	2
ENSSPAP00000005223	RRM_1	PF00076.22	4.5e-31	1	2
ENSSPAP00000005223	RRM_1	PF00076.22	4.5e-31	2	2
ENSSPAP00000005180	RRM_1	PF00076.22	4.9e-31	1	2
ENSSPAP00000005180	RRM_1	PF00076.22	4.9e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000005377	-	1257	XM_008280734	ENSSPAP00000005274	418 (aa)	XP_008278956	-
ENSSPAT00000005281	-	1967	-	ENSSPAP00000005180	526 (aa)	-	-
ENSSPAT00000005324	-	1916	-	ENSSPAP00000005223	509 (aa)	-	-

Gene Model

Click here to download ENSSPAG00000003983's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000003983's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000003983	-	93	62.053	ENSSPAG00000000059	RBMS1	89	68.519
ENSSPAG00000003983	-	88	65.974	ENSSPAG00000022418	rbms2b	83	78.662
ENSSPAG00000003983	-	76	55.325	ENSSPAG00000005371	rbms1a	85	60.308
ENSSPAG00000003983	-	50	33.636	ENSSPAG00000011250	-	56	36.559
ENSSPAG00000003983	-	88	71.117	ENSSPAG00000000639	rbms2a	97	74.167
ENSSPAG00000003983	-	99	74.831	ENSSPAG00000020693	rbms3	92	86.905

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000003983	-	99	82.423	ENSG00000144642	RBMS3	100	90.152	Homo_sapiens
ENSSPAG00000003983	-	99	67.647	ENSAPOG00000007266	rbms3	99	68.277	Acanthochromis_polyacanthus
ENSSPAG00000003983	-	100	97.148	ENSAPOG00000003432	-	100	97.148	Acanthochromis_polyacanthus
ENSSPAG00000003983	-	69	79.412	ENSAMEG00000005947	RBMS3	99	84.158	Ailuropoda_melanoleuca
ENSSPAG00000003983	-	88	70.604	ENSACIG00000021113	RBMS3	95	74.863	Amphilophus_citrinellus
ENSSPAG00000003983	-	74	91.718	ENSACIG00000006987	-	90	97.264	Amphilophus_citrinellus
ENSSPAG00000003983	-	99	75.056	ENSAOCG00000021274	rbms3	99	75.056	Amphiprion_ocellaris
ENSSPAG00000003983	-	100	96.958	ENSAOCG00000024104	-	100	96.958	Amphiprion_ocellaris
ENSSPAG00000003983	-	100	88.551	ENSAPEG00000009481	-	100	88.551	Amphiprion_percula
ENSSPAG00000003983	-	82	74.933	ENSAPEG00000016299	rbms3	87	87.048	Amphiprion_percula
ENSSPAG00000003983	-	99	75.621	ENSATEG00000024295	rbms3	99	76.072	Anabas_testudineus
ENSSPAG00000003983	-	100	91.635	ENSATEG00000008433	-	94	99.491	Anabas_testudineus
ENSSPAG00000003983	-	99	81.735	ENSAPLG00000012270	RBMS3	99	81.050	Anas_platyrhynchos
ENSSPAG00000003983	-	99	81.507	ENSACAG00000028664	RBMS3	99	81.507	Anolis_carolinensis
ENSSPAG00000003983	-	99	82.660	ENSANAG00000021899	RBMS3	99	82.423	Aotus_nancymaae
ENSSPAG00000003983	-	99	74.887	ENSACLG00000018506	rbms3	95	84.140	Astatotilapia_calliptera
ENSSPAG00000003983	-	100	93.774	ENSACLG00000008976	-	100	93.019	Astatotilapia_calliptera
ENSSPAG00000003983	-	99	86.058	ENSAMXG00000020388	rbms3	99	86.058	Astyanax_mexicanus
ENSSPAG00000003983	-	62	87.597	ENSAMXG00000043770	-	100	87.597	Astyanax_mexicanus
ENSSPAG00000003983	-	99	85.545	ENSBTAG00000044062	RBMS3	99	85.545	Bos_taurus
ENSSPAG00000003983	-	99	85.071	ENSCJAG00000004312	RBMS3	99	85.071	Callithrix_jacchus
ENSSPAG00000003983	-	99	81.777	ENSCAFG00000005464	RBMS3	99	81.777	Canis_familiaris
ENSSPAG00000003983	-	99	81.777	ENSCAFG00020024980	RBMS3	99	81.777	Canis_lupus_dingo
ENSSPAG00000003983	-	99	85.071	ENSCHIG00000009144	RBMS3	99	85.071	Capra_hircus
ENSSPAG00000003983	-	76	84.953	ENSTSYG00000002615	RBMS3	99	85.758	Carlito_syrichta
ENSSPAG00000003983	-	88	79.837	ENSCAPG00000017783	RBMS3	95	82.842	Cavia_aperea
ENSSPAG00000003983	-	99	82.028	ENSCPOG00000006457	RBMS3	99	82.028	Cavia_porcellus
ENSSPAG00000003983	-	99	82.423	ENSCCAG00000008671	RBMS3	99	82.185	Cebus_capucinus
ENSSPAG00000003983	-	100	82.075	ENSCATG00000013222	RBMS3	99	81.840	Cercocebus_atys
ENSSPAG00000003983	-	99	81.321	ENSCLAG00000005866	RBMS3	99	81.321	Chinchilla_lanigera
ENSSPAG00000003983	-	65	77.163	ENSCSAG00000009655	RBMS3	99	87.778	Chlorocebus_sabaeus
ENSSPAG00000003983	-	87	88.000	ENSCHOG00000000758	RBMS3	86	88.000	Choloepus_hoffmanni
ENSSPAG00000003983	-	99	81.735	ENSCPBG00000022678	RBMS3	99	81.735	Chrysemys_picta_bellii
ENSSPAG00000003983	-	99	82.185	ENSCANG00000032137	RBMS3	99	81.948	Colobus_angolensis_palliatus
ENSSPAG00000003983	-	99	80.645	ENSCGRG00001007243	Rbms3	95	85.965	Cricetulus_griseus_chok1gshd
ENSSPAG00000003983	-	99	83.933	ENSCGRG00000004599	Rbms3	99	83.933	Cricetulus_griseus_crigri
ENSSPAG00000003983	-	100	89.425	ENSCSEG00000014677	-	94	100.000	Cynoglossus_semilaevis
ENSSPAG00000003983	-	99	75.450	ENSCSEG00000010011	RBMS3	99	75.901	Cynoglossus_semilaevis
ENSSPAG00000003983	-	99	76.082	ENSCVAG00000022354	rbms3	99	76.082	Cyprinodon_variegatus
ENSSPAG00000003983	-	100	88.073	ENSCVAG00000022814	-	100	99.217	Cyprinodon_variegatus
ENSSPAG00000003983	-	99	82.217	ENSDARG00000044574	rbms3	95	94.891	Danio_rerio
ENSSPAG00000003983	-	99	84.123	ENSDNOG00000016645	RBMS3	99	84.123	Dasypus_novemcinctus
ENSSPAG00000003983	-	99	81.321	ENSDORG00000007220	Rbms3	99	81.321	Dipodomys_ordii
ENSSPAG00000003983	-	87	83.333	ENSETEG00000009485	-	80	70.286	Echinops_telfairi
ENSSPAG00000003983	-	63	55.431	ENSEBUG00000005830	rbms3	86	55.263	Eptatretus_burgeri
ENSSPAG00000003983	-	99	84.360	ENSEASG00005006152	RBMS3	99	84.360	Equus_asinus_asinus
ENSSPAG00000003983	-	99	84.834	ENSECAG00000017871	RBMS3	99	84.834	Equus_caballus
ENSSPAG00000003983	-	90	75.940	ENSEEUG00000014337	RBMS3	100	75.940	Erinaceus_europaeus
ENSSPAG00000003983	-	99	73.529	ENSELUG00000002862	rbms3	94	82.561	Esox_lucius
ENSSPAG00000003983	-	92	87.282	ENSELUG00000006905	-	100	96.335	Esox_lucius
ENSSPAG00000003983	-	99	84.597	ENSFCAG00000002130	RBMS3	99	84.597	Felis_catus
ENSSPAG00000003983	-	99	81.963	ENSFALG00000009165	RBMS3	99	81.963	Ficedula_albicollis
ENSSPAG00000003983	-	99	80.866	ENSFDAG00000008278	RBMS3	99	80.866	Fukomys_damarensis
ENSSPAG00000003983	-	95	62.736	ENSFHEG00000004787	RBMS3	94	76.294	Fundulus_heteroclitus
ENSSPAG00000003983	-	90	84.635	ENSGMOG00000002600	-	96	89.421	Gadus_morhua
ENSSPAG00000003983	-	99	81.963	ENSGALG00000011439	RBMS3	99	81.963	Gallus_gallus
ENSSPAG00000003983	-	100	90.826	ENSGAFG00000003329	-	94	98.985	Gambusia_affinis
ENSSPAG00000003983	-	99	75.909	ENSGAFG00000000168	rbms3	95	84.553	Gambusia_affinis
ENSSPAG00000003983	-	65	77.586	ENSGAGG00000004039	RBMS3	99	88.192	Gopherus_agassizii
ENSSPAG00000003983	-	99	82.423	ENSGGOG00000007228	RBMS3	99	82.185	Gorilla_gorilla
ENSSPAG00000003983	-	63	85.874	ENSHBUG00000021196	rbms3	94	85.874	Haplochromis_burtoni
ENSSPAG00000003983	-	100	98.977	ENSHBUG00000019785	-	95	98.977	Haplochromis_burtoni
ENSSPAG00000003983	-	99	81.321	ENSHGLG00000002170	RBMS3	99	81.321	Heterocephalus_glaber_female
ENSSPAG00000003983	-	99	81.321	ENSHGLG00100014278	RBMS3	99	81.321	Heterocephalus_glaber_male
ENSSPAG00000003983	-	100	88.991	ENSHCOG00000007894	-	98	97.449	Hippocampus_comes
ENSSPAG00000003983	-	99	82.910	ENSIPUG00000017680	rbms3	99	82.910	Ictalurus_punctatus
ENSSPAG00000003983	-	99	81.777	ENSSTOG00000006324	RBMS3	99	81.777	Ictidomys_tridecemlineatus
ENSSPAG00000003983	-	99	78.132	ENSJJAG00000014708	Rbms3	99	78.360	Jaculus_jaculus
ENSSPAG00000003983	-	100	92.395	ENSKMAG00000012586	-	100	92.205	Kryptolebias_marmoratus
ENSSPAG00000003983	-	99	73.991	ENSKMAG00000020500	rbms3	99	74.215	Kryptolebias_marmoratus
ENSSPAG00000003983	-	100	98.210	ENSLBEG00000027388	-	100	98.210	Labrus_bergylta
ENSSPAG00000003983	-	61	69.611	ENSLBEG00000006677	rbms3	97	75.379	Labrus_bergylta
ENSSPAG00000003983	-	99	83.524	ENSLACG00000010581	RBMS3	99	83.524	Latimeria_chalumnae
ENSSPAG00000003983	-	70	81.494	ENSLOCG00000002328	rbms3	99	92.042	Lepisosteus_oculatus
ENSSPAG00000003983	-	99	81.549	ENSLAFG00000000354	RBMS3	99	81.549	Loxodonta_africana
ENSSPAG00000003983	-	99	82.185	ENSMFAG00000033300	RBMS3	99	81.948	Macaca_fascicularis
ENSSPAG00000003983	-	99	82.185	ENSMMUG00000004404	RBMS3	99	81.948	Macaca_mulatta
ENSSPAG00000003983	-	99	82.185	ENSMNEG00000035839	RBMS3	96	85.347	Macaca_nemestrina
ENSSPAG00000003983	-	100	82.075	ENSMLEG00000029464	RBMS3	99	81.840	Mandrillus_leucophaeus
ENSSPAG00000003983	-	100	92.776	ENSMAMG00000002176	-	100	99.233	Mastacembelus_armatus
ENSSPAG00000003983	-	99	78.923	ENSMAMG00000024043	rbms3	99	80.094	Mastacembelus_armatus
ENSSPAG00000003983	-	99	74.887	ENSMZEG00005006308	rbms3	99	75.339	Maylandia_zebra
ENSSPAG00000003983	-	100	93.774	ENSMZEG00005026469	-	100	93.019	Maylandia_zebra
ENSSPAG00000003983	-	99	80.645	ENSMAUG00000016436	Rbms3	95	85.965	Mesocricetus_auratus
ENSSPAG00000003983	-	99	85.308	ENSMICG00000049249	RBMS3	99	85.308	Microcebus_murinus
ENSSPAG00000003983	-	99	80.645	ENSMOCG00000006997	Rbms3	95	85.714	Microtus_ochrogaster
ENSSPAG00000003983	-	100	89.425	ENSMMOG00000015071	-	94	97.455	Mola_mola
ENSSPAG00000003983	-	82	75.610	ENSMMOG00000008471	RBMS3	89	87.842	Mola_mola
ENSSPAG00000003983	-	99	78.587	ENSMODG00000015125	RBMS3	99	77.704	Monodelphis_domestica
ENSSPAG00000003983	-	99	91.914	ENSMALG00000009155	-	100	90.575	Monopterus_albus
ENSSPAG00000003983	-	99	75.450	ENSMALG00000019536	RBMS3	99	73.815	Monopterus_albus
ENSSPAG00000003983	-	99	82.974	MGP_CAROLIEiJ_G0032783	Rbms3	100	90.338	Mus_caroli
ENSSPAG00000003983	-	99	83.693	ENSMUSG00000039607	Rbms3	100	91.787	Mus_musculus
ENSSPAG00000003983	-	99	83.493	MGP_PahariEiJ_G0015650	Rbms3	100	91.787	Mus_pahari
ENSSPAG00000003983	-	99	83.693	MGP_SPRETEiJ_G0033930	Rbms3	100	91.787	Mus_spretus
ENSSPAG00000003983	-	99	81.777	ENSMPUG00000011956	RBMS3	99	81.777	Mustela_putorius_furo
ENSSPAG00000003983	-	99	81.093	ENSMLUG00000000659	RBMS3	99	81.093	Myotis_lucifugus
ENSSPAG00000003983	-	99	85.372	ENSNGAG00000014039	Rbms3	99	85.372	Nannospalax_galili
ENSSPAG00000003983	-	100	90.783	ENSNBRG00000018065	-	100	90.783	Neolamprologus_brichardi
ENSSPAG00000003983	-	99	82.423	ENSNLEG00000004129	RBMS3	99	82.185	Nomascus_leucogenys
ENSSPAG00000003983	-	99	75.000	ENSMEUG00000004772	RBMS3	99	75.000	Notamacropus_eugenii
ENSSPAG00000003983	-	99	81.549	ENSOPRG00000006808	RBMS3	85	81.321	Ochotona_princeps
ENSSPAG00000003983	-	99	85.071	ENSODEG00000003651	RBMS3	99	85.071	Octodon_degus
ENSSPAG00000003983	-	99	76.596	ENSONIG00000007172	rbms3	99	77.069	Oreochromis_niloticus
ENSSPAG00000003983	-	99	82.460	ENSOANG00000010529	RBMS3	99	82.460	Ornithorhynchus_anatinus
ENSSPAG00000003983	-	99	81.093	ENSOCUG00000004840	RBMS3	99	81.093	Oryctolagus_cuniculus
ENSSPAG00000003983	-	100	89.885	ENSORLG00000002306	-	100	89.885	Oryzias_latipes
ENSSPAG00000003983	-	99	74.091	ENSORLG00000005370	RBMS3	99	74.318	Oryzias_latipes
ENSSPAG00000003983	-	100	90.115	ENSORLG00020008496	-	96	97.494	Oryzias_latipes_hni
ENSSPAG00000003983	-	99	76.832	ENSORLG00020022674	RBMS3	99	77.069	Oryzias_latipes_hni
ENSSPAG00000003983	-	100	90.115	ENSORLG00015015719	-	100	90.115	Oryzias_latipes_hsok
ENSSPAG00000003983	-	99	77.305	ENSORLG00015005509	rbms3	99	77.541	Oryzias_latipes_hsok
ENSSPAG00000003983	-	99	74.773	ENSOMEG00000014805	RBMS3	95	83.065	Oryzias_melastigma
ENSSPAG00000003983	-	99	89.423	ENSOMEG00000007677	-	100	98.168	Oryzias_melastigma
ENSSPAG00000003983	-	99	81.321	ENSOARG00000014684	RBMS3	99	81.321	Ovis_aries
ENSSPAG00000003983	-	99	82.423	ENSPPAG00000036519	RBMS3	99	82.185	Pan_paniscus
ENSSPAG00000003983	-	99	84.123	ENSPPRG00000002761	RBMS3	99	81.948	Panthera_pardus
ENSSPAG00000003983	-	99	84.360	ENSPTIG00000011568	RBMS3	99	84.360	Panthera_tigris_altaica
ENSSPAG00000003983	-	99	82.423	ENSPTRG00000014709	RBMS3	99	82.185	Pan_troglodytes
ENSSPAG00000003983	-	100	84.706	ENSPANG00000010234	RBMS3	100	78.681	Papio_anubis
ENSSPAG00000003983	-	62	92.636	ENSPKIG00000007989	-	100	92.636	Paramormyrops_kingsleyae
ENSSPAG00000003983	-	50	93.269	ENSPKIG00000016025	-	86	80.632	Paramormyrops_kingsleyae
ENSSPAG00000003983	-	99	81.279	ENSPSIG00000005269	RBMS3	99	81.279	Pelodiscus_sinensis
ENSSPAG00000003983	-	82	74.932	ENSPMGG00000021544	rbms3	86	86.145	Periophthalmus_magnuspinnatus
ENSSPAG00000003983	-	92	89.526	ENSPMGG00000021683	-	100	98.691	Periophthalmus_magnuspinnatus
ENSSPAG00000003983	-	99	77.829	ENSPEMG00000001117	Rbms3	95	82.915	Peromyscus_maniculatus_bairdii
ENSSPAG00000003983	-	78	90.419	ENSPCIG00000006106	RBMS3	89	89.720	Phascolarctos_cinereus
ENSSPAG00000003983	-	99	76.364	ENSPFOG00000017887	rbms3	99	76.364	Poecilia_formosa
ENSSPAG00000003983	-	77	72.647	ENSPLAG00000016866	-	82	81.931	Poecilia_latipinna
ENSSPAG00000003983	-	100	90.826	ENSPMEG00000002993	-	100	90.826	Poecilia_mexicana
ENSSPAG00000003983	-	100	90.133	ENSPREG00000018221	-	97	97.222	Poecilia_reticulata
ENSSPAG00000003983	-	100	74.603	ENSPREG00000011880	rbms3	92	84.906	Poecilia_reticulata
ENSSPAG00000003983	-	99	68.793	ENSPPYG00000014050	RBMS3	82	68.793	Pongo_abelii
ENSSPAG00000003983	-	99	65.376	ENSPCAG00000006307	RBMS3	99	65.376	Procavia_capensis
ENSSPAG00000003983	-	99	82.660	ENSPCOG00000017136	RBMS3	99	82.423	Propithecus_coquereli
ENSSPAG00000003983	-	89	88.000	ENSPVAG00000014037	RBMS3	99	72.665	Pteropus_vampyrus
ENSSPAG00000003983	-	100	91.014	ENSPNYG00000012624	-	100	96.696	Pundamilia_nyererei
ENSSPAG00000003983	-	99	74.661	ENSPNYG00000010546	rbms3	99	75.113	Pundamilia_nyererei
ENSSPAG00000003983	-	99	82.679	ENSPNAG00000001800	rbms3	99	82.679	Pygocentrus_nattereri
ENSSPAG00000003983	-	99	80.645	ENSRNOG00000025881	Rbms3	99	80.645	Rattus_norvegicus
ENSSPAG00000003983	-	99	81.948	ENSRBIG00000035863	RBMS3	99	81.710	Rhinopithecus_bieti
ENSSPAG00000003983	-	88	86.141	ENSRROG00000027512	RBMS3	94	85.751	Rhinopithecus_roxellana
ENSSPAG00000003983	-	99	82.423	ENSSBOG00000020232	RBMS3	99	82.185	Saimiri_boliviensis_boliviensis
ENSSPAG00000003983	-	88	75.844	ENSSHAG00000002411	RBMS3	95	82.527	Sarcophilus_harrisii
ENSSPAG00000003983	-	100	86.897	ENSSFOG00015008578	rbms3	98	94.933	Scleropages_formosus
ENSSPAG00000003983	-	98	84.471	ENSSMAG00000020065	-	95	93.352	Scophthalmus_maximus
ENSSPAG00000003983	-	99	72.584	ENSSMAG00000004997	rbms3	99	83.607	Scophthalmus_maximus
ENSSPAG00000003983	-	99	75.676	ENSSDUG00000013656	RBMS3	99	76.126	Seriola_dumerili
ENSSPAG00000003983	-	100	94.677	ENSSDUG00000019287	-	98	96.822	Seriola_dumerili
ENSSPAG00000003983	-	99	75.391	ENSSLDG00000020276	RBMS3	99	75.839	Seriola_lalandi_dorsalis
ENSSPAG00000003983	-	100	94.677	ENSSLDG00000013224	-	98	96.822	Seriola_lalandi_dorsalis
ENSSPAG00000003983	-	78	74.928	ENSSARG00000000695	RBMS3	94	73.938	Sorex_araneus
ENSSPAG00000003983	-	70	82.993	ENSSPUG00000017197	RBMS3	97	86.195	Sphenodon_punctatus
ENSSPAG00000003983	-	99	84.123	ENSSSCG00000036381	RBMS3	99	84.123	Sus_scrofa
ENSSPAG00000003983	-	76	80.531	ENSTGUG00000003572	RBMS3	99	85.586	Taeniopygia_guttata
ENSSPAG00000003983	-	99	73.874	ENSTRUG00000021719	RBMS3	99	73.874	Takifugu_rubripes
ENSSPAG00000003983	-	100	78.864	ENSTRUG00000007482	-	89	93.352	Takifugu_rubripes
ENSSPAG00000003983	-	78	83.478	ENSTBEG00000005362	RBMS3	94	87.106	Tupaia_belangeri
ENSSPAG00000003983	-	99	81.093	ENSTTRG00000006202	RBMS3	99	81.093	Tursiops_truncatus
ENSSPAG00000003983	-	99	81.777	ENSUMAG00000000263	RBMS3	99	81.777	Ursus_maritimus
ENSSPAG00000003983	-	88	72.656	ENSVPAG00000003842	RBMS3	94	75.321	Vicugna_pacos
ENSSPAG00000003983	-	88	82.857	ENSVVUG00000004660	RBMS3	94	92.202	Vulpes_vulpes
ENSSPAG00000003983	-	70	78.710	ENSXETG00000032055	RBMS3	98	82.085	Xenopus_tropicalis
ENSSPAG00000003983	-	92	76.617	ENSXCOG00000019600	-	100	83.548	Xiphophorus_couchianus
ENSSPAG00000003983	-	100	91.055	ENSXMAG00000014382	-	98	96.341	Xiphophorus_maculatus
ENSSPAG00000003983	-	99	77.123	ENSXMAG00000021783	rbms3	99	77.358	Xiphophorus_maculatus