EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000004190 (Gene tree)
Gene ID: 103374015
Gene Symbol: -
Alias: -
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 16749 bases
Position: chrKK582191.1:27787-44535
Accession: 103374015
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000005421	KH_1	PF00013.29	1.5e-45	1	3
ENSSPAP00000005421	KH_1	PF00013.29	1.5e-45	2	3
ENSSPAP00000005421	KH_1	PF00013.29	1.5e-45	3	3
ENSSPAP00000005421	KH_2	PF07650.17	7.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000005533	-	879	XM_008304029	ENSSPAP00000005421	292 (aa)	XP_008302251	-

Gene Model

Click here to download ENSSPAG00000004190's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000004190's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000004190	-	97	73.529	ENSSPAG00000023341	-	84	73.529
ENSSPAG00000004190	-	98	40.845	ENSSPAG00000001033	nova1	52	40.845
ENSSPAG00000004190	-	95	34.444	ENSSPAG00000018848	fubp3	73	34.444
ENSSPAG00000004190	-	96	33.835	ENSSPAG00000000521	IGF2BP2	61	33.835
ENSSPAG00000004190	-	99	73.154	ENSSPAG00000022833	PCBP2	87	73.154
ENSSPAG00000004190	-	71	41.026	ENSSPAG00000008349	khsrp	53	41.026
ENSSPAG00000004190	-	100	71.044	ENSSPAG00000000563	zgc:110045	95	71.044
ENSSPAG00000004190	-	97	58.632	ENSSPAG00000003033	-	67	56.291
ENSSPAG00000004190	-	99	74.394	ENSSPAG00000017005	pcbp2	87	74.394
ENSSPAG00000004190	-	74	58.798	ENSSPAG00000019058	-	58	58.547
ENSSPAG00000004190	-	73	52.857	ENSSPAG00000011699	hnrpkl	58	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000004190	-	99	91.379	ENSAPOG00000020003	pcbp3	79	91.379	Acanthochromis_polyacanthus
ENSSPAG00000004190	-	100	93.960	ENSAPOG00000016582	-	91	95.053	Acanthochromis_polyacanthus
ENSSPAG00000004190	-	100	92.000	ENSAMEG00000001697	-	89	92.000	Ailuropoda_melanoleuca
ENSSPAG00000004190	-	100	93.000	ENSACIG00000002739	-	89	93.000	Amphilophus_citrinellus
ENSSPAG00000004190	-	99	84.127	ENSACIG00000010933	pcbp3	88	84.127	Amphilophus_citrinellus
ENSSPAG00000004190	-	100	99.658	ENSAOCG00000007806	-	100	99.658	Amphiprion_ocellaris
ENSSPAG00000004190	-	96	93.262	ENSAOCG00000008592	-	93	93.262	Amphiprion_ocellaris
ENSSPAG00000004190	-	100	95.563	ENSAPEG00000005209	-	88	95.563	Amphiprion_percula
ENSSPAG00000004190	-	97	85.621	ENSAPEG00000008011	pcbp3	91	85.621	Amphiprion_percula
ENSSPAG00000004190	-	96	86.230	ENSATEG00000015787	-	90	86.230	Anabas_testudineus
ENSSPAG00000004190	-	100	95.563	ENSATEG00000009833	-	89	95.563	Anabas_testudineus
ENSSPAG00000004190	-	97	73.112	ENSAPLG00000008951	-	77	73.112	Anas_platyrhynchos
ENSSPAG00000004190	-	100	92.881	ENSAPLG00000002975	-	96	92.881	Anas_platyrhynchos
ENSSPAG00000004190	-	100	84.877	ENSACAG00000004607	-	96	84.877	Anolis_carolinensis
ENSSPAG00000004190	-	100	79.683	ENSACAG00000009819	-	95	79.683	Anolis_carolinensis
ENSSPAG00000004190	-	85	92.000	ENSANAG00000030702	-	100	92.000	Aotus_nancymaae
ENSSPAG00000004190	-	99	83.810	ENSACLG00000011835	pcbp3	93	83.810	Astatotilapia_calliptera
ENSSPAG00000004190	-	100	94.881	ENSACLG00000003801	-	95	94.881	Astatotilapia_calliptera
ENSSPAG00000004190	-	96	91.103	ENSAMXG00000013588	-	89	91.103	Astyanax_mexicanus
ENSSPAG00000004190	-	95	67.869	ENSAMXG00000001760	zgc:110045	66	67.869	Astyanax_mexicanus
ENSSPAG00000004190	-	97	87.255	ENSAMXG00000003440	pcbp3	91	87.255	Astyanax_mexicanus
ENSSPAG00000004190	-	92	96.482	ENSCAFG00020019472	-	80	96.482	Canis_lupus_dingo
ENSSPAG00000004190	-	100	93.174	ENSCSAG00000007440	-	87	93.174	Chlorocebus_sabaeus
ENSSPAG00000004190	-	100	92.027	ENSCPBG00000012151	-	96	92.027	Chrysemys_picta_bellii
ENSSPAG00000004190	-	97	79.344	ENSCPBG00000000733	-	71	79.344	Chrysemys_picta_bellii
ENSSPAG00000004190	-	96	91.844	ENSCSEG00000000822	pcbp3	89	91.844	Cynoglossus_semilaevis
ENSSPAG00000004190	-	100	79.421	ENSCSEG00000016984	-	91	79.421	Cynoglossus_semilaevis
ENSSPAG00000004190	-	97	85.902	ENSCVAG00000014482	pcbp3	91	85.902	Cyprinodon_variegatus
ENSSPAG00000004190	-	100	95.222	ENSCVAG00000005262	-	88	95.222	Cyprinodon_variegatus
ENSSPAG00000004190	-	100	88.291	ENSDARG00000054378	pcbp3	96	88.291	Danio_rerio
ENSSPAG00000004190	-	85	91.600	ENSETEG00000015988	-	75	91.600	Echinops_telfairi
ENSSPAG00000004190	-	99	70.690	ENSEBUG00000016192	pcbp3	99	70.968	Eptatretus_burgeri
ENSSPAG00000004190	-	93	70.874	ENSEBUG00000005495	pcbp3	62	70.874	Eptatretus_burgeri
ENSSPAG00000004190	-	100	77.365	ENSEBUG00000007485	-	78	80.749	Eptatretus_burgeri
ENSSPAG00000004190	-	97	94.346	ENSELUG00000001560	-	90	86.667	Esox_lucius
ENSSPAG00000004190	-	98	87.500	ENSELUG00000003521	pcbp3	91	86.275	Esox_lucius
ENSSPAG00000004190	-	97	73.112	ENSFALG00000004411	-	73	73.112	Ficedula_albicollis
ENSSPAG00000004190	-	100	92.808	ENSFALG00000003949	-	96	92.808	Ficedula_albicollis
ENSSPAG00000004190	-	100	95.563	ENSFHEG00000006539	-	88	95.563	Fundulus_heteroclitus
ENSSPAG00000004190	-	97	93.310	ENSFHEG00000016615	pcbp3	86	93.310	Fundulus_heteroclitus
ENSSPAG00000004190	-	96	73.793	ENSGMOG00000008611	-	88	73.793	Gadus_morhua
ENSSPAG00000004190	-	97	79.592	ENSGMOG00000011992	pcbp3	92	80.272	Gadus_morhua
ENSSPAG00000004190	-	99	78.025	ENSGALG00000013155	-	93	78.025	Gallus_gallus
ENSSPAG00000004190	-	100	85.449	ENSGALG00000004394	-	98	89.674	Gallus_gallus
ENSSPAG00000004190	-	100	84.494	ENSGAFG00000011430	pcbp3	88	84.494	Gambusia_affinis
ENSSPAG00000004190	-	97	94.700	ENSGAFG00000010274	-	91	94.700	Gambusia_affinis
ENSSPAG00000004190	-	100	93.377	ENSGACG00000002266	-	96	93.377	Gasterosteus_aculeatus
ENSSPAG00000004190	-	100	79.257	ENSGACG00000014955	-	96	79.257	Gasterosteus_aculeatus
ENSSPAG00000004190	-	76	96.689	ENSGAGG00000006956	-	63	96.689	Gopherus_agassizii
ENSSPAG00000004190	-	95	85.971	ENSGAGG00000000271	-	100	85.971	Gopherus_agassizii
ENSSPAG00000004190	-	96	93.238	ENSHBUG00000010697	pcbp3	85	93.238	Haplochromis_burtoni
ENSSPAG00000004190	-	100	94.881	ENSHBUG00000021782	-	95	94.881	Haplochromis_burtoni
ENSSPAG00000004190	-	100	90.411	ENSHCOG00000006067	-	95	90.411	Hippocampus_comes
ENSSPAG00000004190	-	97	85.902	ENSHCOG00000017868	pcbp3	91	85.902	Hippocampus_comes
ENSSPAG00000004190	-	100	94.539	ENSIPUG00000006238	pcbp3	90	94.539	Ictalurus_punctatus
ENSSPAG00000004190	-	97	85.621	ENSKMAG00000003046	pcbp3	91	85.621	Kryptolebias_marmoratus
ENSSPAG00000004190	-	97	94.346	ENSKMAG00000018530	-	91	94.346	Kryptolebias_marmoratus
ENSSPAG00000004190	-	89	87.594	ENSLBEG00000006542	-	86	87.594	Labrus_bergylta
ENSSPAG00000004190	-	99	91.724	ENSLBEG00000006201	pcbp3	87	91.724	Labrus_bergylta
ENSSPAG00000004190	-	97	73.171	ENSLACG00000010804	zgc:110045	72	73.171	Latimeria_chalumnae
ENSSPAG00000004190	-	97	79.027	ENSLACG00000010386	pcbp3	72	79.027	Latimeria_chalumnae
ENSSPAG00000004190	-	97	78.361	ENSLOCG00000005058	zgc:110045	78	78.361	Lepisosteus_oculatus
ENSSPAG00000004190	-	100	92.027	ENSLOCG00000009369	pcbp3	96	92.027	Lepisosteus_oculatus
ENSSPAG00000004190	-	100	94.539	ENSMAMG00000011620	-	89	94.539	Mastacembelus_armatus
ENSSPAG00000004190	-	96	93.594	ENSMAMG00000022336	pcbp3	83	93.594	Mastacembelus_armatus
ENSSPAG00000004190	-	100	87.419	ENSMZEG00005014882	-	91	87.419	Maylandia_zebra
ENSSPAG00000004190	-	99	84.127	ENSMZEG00005008993	pcbp3	86	85.809	Maylandia_zebra
ENSSPAG00000004190	-	97	73.112	ENSMGAG00000006794	-	73	73.112	Meleagris_gallopavo
ENSSPAG00000004190	-	96	78.846	ENSMGAG00000001883	-	93	79.167	Meleagris_gallopavo
ENSSPAG00000004190	-	100	94.539	ENSMMOG00000005216	-	90	94.539	Mola_mola
ENSSPAG00000004190	-	96	93.594	ENSMMOG00000000730	pcbp3	76	93.594	Mola_mola
ENSSPAG00000004190	-	82	79.439	ENSMODG00000027884	-	93	79.439	Monodelphis_domestica
ENSSPAG00000004190	-	96	85.855	ENSMALG00000000691	pcbp3	86	85.855	Monopterus_albus
ENSSPAG00000004190	-	99	89.597	ENSMPUG00000001779	-	82	89.597	Mustela_putorius_furo
ENSSPAG00000004190	-	99	84.395	ENSNBRG00000016409	-	88	84.395	Neolamprologus_brichardi
ENSSPAG00000004190	-	100	88.487	ENSNBRG00000016714	-	91	88.487	Neolamprologus_brichardi
ENSSPAG00000004190	-	96	84.244	ENSOPRG00000003431	-	90	84.244	Ochotona_princeps
ENSSPAG00000004190	-	100	94.881	ENSONIG00000004611	-	95	94.881	Oreochromis_niloticus
ENSSPAG00000004190	-	96	84.295	ENSONIG00000012122	-	93	84.295	Oreochromis_niloticus
ENSSPAG00000004190	-	100	92.808	ENSOCUG00000002696	-	87	92.808	Oryctolagus_cuniculus
ENSSPAG00000004190	-	100	95.222	ENSORLG00000022739	-	95	95.222	Oryzias_latipes
ENSSPAG00000004190	-	96	93.262	ENSORLG00000000059	pcbp3	95	93.262	Oryzias_latipes
ENSSPAG00000004190	-	96	93.262	ENSORLG00020012671	pcbp3	93	93.262	Oryzias_latipes_hni
ENSSPAG00000004190	-	100	94.881	ENSORLG00020006124	-	95	94.881	Oryzias_latipes_hni
ENSSPAG00000004190	-	96	93.262	ENSORLG00015000429	pcbp3	93	93.262	Oryzias_latipes_hsok
ENSSPAG00000004190	-	99	93.151	ENSORLG00015008051	-	93	93.151	Oryzias_latipes_hsok
ENSSPAG00000004190	-	100	94.539	ENSOMEG00000020162	-	95	94.539	Oryzias_melastigma
ENSSPAG00000004190	-	99	91.753	ENSOMEG00000020811	pcbp3	96	91.753	Oryzias_melastigma
ENSSPAG00000004190	-	100	83.742	ENSOGAG00000008044	-	96	83.742	Otolemur_garnettii
ENSSPAG00000004190	-	77	87.342	ENSPKIG00000020913	-	71	87.342	Paramormyrops_kingsleyae
ENSSPAG00000004190	-	100	94.539	ENSPKIG00000019329	pcbp3	90	94.681	Paramormyrops_kingsleyae
ENSSPAG00000004190	-	100	81.940	ENSPSIG00000014970	-	96	82.609	Pelodiscus_sinensis
ENSSPAG00000004190	-	80	77.821	ENSPSIG00000008350	-	68	77.821	Pelodiscus_sinensis
ENSSPAG00000004190	-	96	85.855	ENSPMGG00000022383	pcbp3	91	85.855	Periophthalmus_magnuspinnatus
ENSSPAG00000004190	-	99	71.233	ENSPMAG00000004551	pcbp3	81	71.233	Petromyzon_marinus
ENSSPAG00000004190	-	82	87.742	ENSPMAG00000004637	-	93	87.742	Petromyzon_marinus
ENSSPAG00000004190	-	100	86.076	ENSPCIG00000028092	-	87	96.471	Phascolarctos_cinereus
ENSSPAG00000004190	-	100	97.270	ENSPLAG00000004074	-	84	97.270	Poecilia_latipinna
ENSSPAG00000004190	-	100	84.424	ENSPLAG00000011449	pcbp3	82	84.424	Poecilia_latipinna
ENSSPAG00000004190	-	100	93.443	ENSPMEG00000006653	-	91	93.443	Poecilia_mexicana
ENSSPAG00000004190	-	100	84.127	ENSPMEG00000021239	pcbp3	83	85.855	Poecilia_mexicana
ENSSPAG00000004190	-	100	95.222	ENSPREG00000020585	-	88	98.830	Poecilia_reticulata
ENSSPAG00000004190	-	96	93.262	ENSPREG00000015736	pcbp3	88	93.262	Poecilia_reticulata
ENSSPAG00000004190	-	100	94.881	ENSPNYG00000013205	-	90	94.881	Pundamilia_nyererei
ENSSPAG00000004190	-	96	92.908	ENSPNYG00000012326	pcbp3	83	92.908	Pundamilia_nyererei
ENSSPAG00000004190	-	100	94.881	ENSPNAG00000015104	pcbp3	95	94.881	Pygocentrus_nattereri
ENSSPAG00000004190	-	96	91.071	ENSPNAG00000008541	-	88	91.071	Pygocentrus_nattereri
ENSSPAG00000004190	-	100	92.833	ENSRNOG00000001245	Pcbp3	96	92.833	Rattus_norvegicus
ENSSPAG00000004190	-	100	84.899	ENSRBIG00000028177	-	88	78.354	Rhinopithecus_bieti
ENSSPAG00000004190	-	100	92.000	ENSSHAG00000007890	-	96	92.000	Sarcophilus_harrisii
ENSSPAG00000004190	-	97	95.035	ENSSFOG00015010205	pcbp3	90	95.035	Scleropages_formosus
ENSSPAG00000004190	-	97	86.230	ENSSFOG00015014706	pcbp3	84	86.230	Scleropages_formosus
ENSSPAG00000004190	-	100	81.507	ENSSFOG00015007118	-	86	81.507	Scleropages_formosus
ENSSPAG00000004190	-	96	93.262	ENSSMAG00000011929	pcbp3	87	93.262	Scophthalmus_maximus
ENSSPAG00000004190	-	100	94.881	ENSSMAG00000003135	-	95	94.881	Scophthalmus_maximus
ENSSPAG00000004190	-	97	90.210	ENSSDUG00000008502	-	84	90.210	Seriola_dumerili
ENSSPAG00000004190	-	96	86.184	ENSSDUG00000011608	pcbp3	89	86.184	Seriola_dumerili
ENSSPAG00000004190	-	96	86.184	ENSSLDG00000008518	pcbp3	89	86.184	Seriola_lalandi_dorsalis
ENSSPAG00000004190	-	97	95.053	ENSSLDG00000020161	-	91	95.053	Seriola_lalandi_dorsalis
ENSSPAG00000004190	-	95	79.000	ENSSPUG00000013214	-	91	79.000	Sphenodon_punctatus
ENSSPAG00000004190	-	99	91.582	ENSTGUG00000003316	-	88	91.582	Taeniopygia_guttata
ENSSPAG00000004190	-	100	85.324	ENSTGUG00000008158	-	96	85.324	Taeniopygia_guttata
ENSSPAG00000004190	-	97	89.189	ENSTRUG00000013604	pcbp3	79	98.710	Takifugu_rubripes
ENSSPAG00000004190	-	100	95.222	ENSTRUG00000006280	-	89	95.222	Takifugu_rubripes
ENSSPAG00000004190	-	100	84.520	ENSTTRG00000015075	-	96	84.520	Tursiops_truncatus
ENSSPAG00000004190	-	97	73.252	ENSXETG00000010491	pcbp2	70	73.252	Xenopus_tropicalis
ENSSPAG00000004190	-	100	89.369	ENSXETG00000011483	pcbp1	96	89.369	Xenopus_tropicalis
ENSSPAG00000004190	-	96	85.855	ENSXCOG00000020481	pcbp3	83	85.855	Xiphophorus_couchianus
ENSSPAG00000004190	-	97	85.621	ENSXMAG00000008175	pcbp3	91	85.621	Xiphophorus_maculatus
ENSSPAG00000004190	-	97	95.053	ENSXMAG00000028711	-	91	95.053	Xiphophorus_maculatus