EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000004654 (Gene tree)
Gene ID: 103357107
Gene Symbol: vars2
Alias: si:ch211-152p11.2
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 17158 bases
Position: chrKK580077.1:1418353-1435510
Accession: 103357107
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000006286	tRNA-synt_1g	PF09334.11	8.7e-15	1	1
ENSSPAP00000006332	tRNA-synt_1g	PF09334.11	9.6e-15	1	1
ENSSPAP00000006332	Anticodon_1	PF08264.13	2e-39	1	1
ENSSPAP00000006286	Anticodon_1	PF08264.13	2e-39	1	1
ENSSPAP00000006332	tRNA-synt_1	PF00133.22	3e-179	1	2
ENSSPAP00000006332	tRNA-synt_1	PF00133.22	3e-179	2	2
ENSSPAP00000006286	tRNA-synt_1	PF00133.22	6.7e-179	1	2
ENSSPAP00000006286	tRNA-synt_1	PF00133.22	6.7e-179	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000006461	-	3105	-	ENSSPAP00000006332	1034 (aa)	-	-
ENSSPAT00000006414	-	3135	XM_008281516	ENSSPAP00000006286	1044 (aa)	XP_008279738	-

Gene Model

Click here to download ENSSPAG00000004654's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000004654's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000004654	vars2	98	45.763	ENSSPAG00000017068	vars	79	47.734

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000004654	vars2	100	84.317	ENSAPOG00000007396	vars2	99	84.317	Acanthochromis_polyacanthus
ENSSPAG00000004654	vars2	95	49.089	ENSAMEG00000012997	VARS2	90	50.402	Ailuropoda_melanoleuca
ENSSPAG00000004654	vars2	99	79.081	ENSACIG00000004344	vars2	99	79.081	Amphilophus_citrinellus
ENSSPAG00000004654	vars2	99	84.352	ENSAOCG00000000476	vars2	99	84.352	Amphiprion_ocellaris
ENSSPAG00000004654	vars2	100	84.133	ENSAPEG00000008646	vars2	98	84.133	Amphiprion_percula
ENSSPAG00000004654	vars2	100	78.451	ENSATEG00000012291	vars2	99	79.384	Anabas_testudineus
ENSSPAG00000004654	vars2	96	50.719	ENSACAG00000022093	VARS2	91	51.996	Anolis_carolinensis
ENSSPAG00000004654	vars2	99	47.891	ENSANAG00000038018	VARS2	93	49.304	Aotus_nancymaae
ENSSPAG00000004654	vars2	99	76.204	ENSACLG00000018673	vars2	99	76.204	Astatotilapia_calliptera
ENSSPAG00000004654	vars2	96	69.691	ENSAMXG00000017773	vars2	96	70.172	Astyanax_mexicanus
ENSSPAG00000004654	vars2	98	48.820	ENSBTAG00000010698	VARS2	92	50.199	Bos_taurus
ENSSPAG00000004654	vars2	97	48.138	ENSCJAG00000019826	VARS2	93	49.304	Callithrix_jacchus
ENSSPAG00000004654	vars2	97	49.237	ENSCAFG00000000454	VARS2	93	50.449	Canis_familiaris
ENSSPAG00000004654	vars2	83	54.093	ENSCAFG00020019387	VARS2	89	54.767	Canis_lupus_dingo
ENSSPAG00000004654	vars2	96	48.864	ENSCHIG00000007847	VARS2	93	50.199	Capra_hircus
ENSSPAG00000004654	vars2	95	49.665	ENSTSYG00000009904	VARS2	93	50.697	Carlito_syrichta
ENSSPAG00000004654	vars2	89	49.735	ENSCAPG00000017770	VARS2	99	49.735	Cavia_aperea
ENSSPAG00000004654	vars2	99	47.423	ENSCPOG00000021834	VARS2	92	50.050	Cavia_porcellus
ENSSPAG00000004654	vars2	98	48.299	ENSCCAG00000037907	VARS2	93	49.751	Cebus_capucinus
ENSSPAG00000004654	vars2	95	48.797	ENSCATG00000032554	VARS2	93	49.950	Cercocebus_atys
ENSSPAG00000004654	vars2	94	49.754	ENSCLAG00000002889	VARS2	88	51.468	Chinchilla_lanigera
ENSSPAG00000004654	vars2	95	48.893	ENSCSAG00000008327	VARS2	93	50.050	Chlorocebus_sabaeus
ENSSPAG00000004654	vars2	90	54.244	ENSCPBG00000021502	VARS2	95	54.244	Chrysemys_picta_bellii
ENSSPAG00000004654	vars2	95	48.508	ENSCANG00000014991	VARS2	92	49.550	Colobus_angolensis_palliatus
ENSSPAG00000004654	vars2	93	50.651	ENSCGRG00001021535	Vars2	92	50.651	Cricetulus_griseus_chok1gshd
ENSSPAG00000004654	vars2	93	50.651	ENSCGRG00000014112	Vars2	92	50.651	Cricetulus_griseus_crigri
ENSSPAG00000004654	vars2	96	73.451	ENSCSEG00000015432	vars2	99	71.681	Cynoglossus_semilaevis
ENSSPAG00000004654	vars2	65	77.447	ENSCVAG00000017765	vars2	98	77.447	Cyprinodon_variegatus
ENSSPAG00000004654	vars2	100	65.920	ENSDARG00000056717	vars2	100	66.698	Danio_rerio
ENSSPAG00000004654	vars2	81	47.569	ENSDORG00000008516	Vars2	93	47.856	Dipodomys_ordii
ENSSPAG00000004654	vars2	98	45.240	ENSETEG00000014844	VARS2	93	46.276	Echinops_telfairi
ENSSPAG00000004654	vars2	97	47.740	ENSEASG00005019997	VARS2	95	52.443	Equus_asinus_asinus
ENSSPAG00000004654	vars2	97	48.211	ENSECAG00000018202	VARS2	93	50.596	Equus_caballus
ENSSPAG00000004654	vars2	99	67.367	ENSELUG00000017824	vars2	99	67.367	Esox_lucius
ENSSPAG00000004654	vars2	97	47.686	ENSFCAG00000010531	VARS2	93	50.000	Felis_catus
ENSSPAG00000004654	vars2	95	49.562	ENSFDAG00000017216	VARS2	89	51.197	Fukomys_damarensis
ENSSPAG00000004654	vars2	93	72.537	ENSFHEG00000013932	vars2	98	72.537	Fundulus_heteroclitus
ENSSPAG00000004654	vars2	90	68.905	ENSGMOG00000018960	vars2	99	68.905	Gadus_morhua
ENSSPAG00000004654	vars2	93	75.758	ENSGAFG00000004737	vars2	100	75.758	Gambusia_affinis
ENSSPAG00000004654	vars2	93	77.856	ENSGACG00000001464	vars2	99	77.856	Gasterosteus_aculeatus
ENSSPAG00000004654	vars2	92	53.557	ENSGAGG00000011652	VARS2	98	53.557	Gopherus_agassizii
ENSSPAG00000004654	vars2	95	48.893	ENSGGOG00000014587	VARS2	93	50.050	Gorilla_gorilla
ENSSPAG00000004654	vars2	99	75.141	ENSHBUG00000002448	vars2	100	75.141	Haplochromis_burtoni
ENSSPAG00000004654	vars2	98	48.674	ENSHGLG00000012886	VARS2	89	50.200	Heterocephalus_glaber_female
ENSSPAG00000004654	vars2	98	48.580	ENSHGLG00100016535	VARS2	92	50.100	Heterocephalus_glaber_male
ENSSPAG00000004654	vars2	69	74.531	ENSHCOG00000017907	vars2	99	74.531	Hippocampus_comes
ENSSPAG00000004654	vars2	99	67.970	ENSIPUG00000015573	Vars2	99	68.250	Ictalurus_punctatus
ENSSPAG00000004654	vars2	97	48.623	ENSSTOG00000009924	VARS2	93	49.454	Ictidomys_tridecemlineatus
ENSSPAG00000004654	vars2	99	47.814	ENSJJAG00000011144	Vars2	92	49.900	Jaculus_jaculus
ENSSPAG00000004654	vars2	99	76.129	ENSKMAG00000001393	vars2	99	76.129	Kryptolebias_marmoratus
ENSSPAG00000004654	vars2	100	74.462	ENSLBEG00000011949	vars2	99	74.462	Labrus_bergylta
ENSSPAG00000004654	vars2	51	80.616	ENSLBEG00000005480	-	81	80.254	Labrus_bergylta
ENSSPAG00000004654	vars2	95	48.757	ENSLACG00000001576	-	96	49.704	Latimeria_chalumnae
ENSSPAG00000004654	vars2	98	48.868	ENSLAFG00000015183	VARS2	92	50.050	Loxodonta_africana
ENSSPAG00000004654	vars2	95	48.316	ENSMFAG00000042367	VARS2	93	49.451	Macaca_fascicularis
ENSSPAG00000004654	vars2	95	48.412	ENSMMUG00000018609	VARS2	93	49.550	Macaca_mulatta
ENSSPAG00000004654	vars2	95	48.508	ENSMNEG00000043163	VARS2	93	49.650	Macaca_nemestrina
ENSSPAG00000004654	vars2	95	48.993	ENSMLEG00000041728	VARS2	90	49.950	Mandrillus_leucophaeus
ENSSPAG00000004654	vars2	100	75.463	ENSMAMG00000020339	vars2	99	76.204	Mastacembelus_armatus
ENSSPAG00000004654	vars2	99	76.111	ENSMZEG00005017669	vars2	99	76.111	Maylandia_zebra
ENSSPAG00000004654	vars2	97	49.238	ENSMAUG00000018946	Vars2	92	50.500	Mesocricetus_auratus
ENSSPAG00000004654	vars2	81	54.020	ENSMICG00000005365	VARS2	92	56.326	Microcebus_murinus
ENSSPAG00000004654	vars2	97	44.814	ENSMOCG00000014607	Vars2	92	46.100	Microtus_ochrogaster
ENSSPAG00000004654	vars2	99	76.056	ENSMMOG00000012122	vars2	99	76.056	Mola_mola
ENSSPAG00000004654	vars2	94	48.239	ENSMODG00000015848	VARS2	91	48.807	Monodelphis_domestica
ENSSPAG00000004654	vars2	99	78.558	ENSMALG00000009217	vars2	99	79.042	Monopterus_albus
ENSSPAG00000004654	vars2	98	49.763	MGP_CAROLIEiJ_G0021529	Vars2	97	52.993	Mus_caroli
ENSSPAG00000004654	vars2	98	49.242	ENSMUSG00000038838	Vars2	97	52.972	Mus_musculus
ENSSPAG00000004654	vars2	97	48.948	MGP_PahariEiJ_G0020523	Vars2	93	54.396	Mus_pahari
ENSSPAG00000004654	vars2	98	49.148	MGP_SPRETEiJ_G0022436	Vars2	97	52.641	Mus_spretus
ENSSPAG00000004654	vars2	97	49.665	ENSMPUG00000011643	VARS2	93	50.546	Mustela_putorius_furo
ENSSPAG00000004654	vars2	95	50.537	ENSMLUG00000002356	VARS2	86	52.287	Myotis_lucifugus
ENSSPAG00000004654	vars2	96	46.033	ENSNGAG00000020607	Vars2	90	46.748	Nannospalax_galili
ENSSPAG00000004654	vars2	61	68.966	ENSNBRG00000001624	vars2	55	68.966	Neolamprologus_brichardi
ENSSPAG00000004654	vars2	95	48.978	ENSNLEG00000005625	VARS2	90	50.051	Nomascus_leucogenys
ENSSPAG00000004654	vars2	74	66.986	ENSMEUG00000014475	VARS2	82	66.986	Notamacropus_eugenii
ENSSPAG00000004654	vars2	82	64.885	ENSOPRG00000000682	VARS2	80	64.885	Ochotona_princeps
ENSSPAG00000004654	vars2	97	48.378	ENSODEG00000017965	VARS2	92	49.850	Octodon_degus
ENSSPAG00000004654	vars2	93	56.827	ENSONIG00000004734	vars2	100	56.635	Oreochromis_niloticus
ENSSPAG00000004654	vars2	63	44.624	ENSOANG00000000398	-	82	45.803	Ornithorhynchus_anatinus
ENSSPAG00000004654	vars2	95	47.110	ENSOCUG00000021496	VARS2	57	49.072	Oryctolagus_cuniculus
ENSSPAG00000004654	vars2	99	71.311	ENSORLG00000010632	vars2	99	71.311	Oryzias_latipes
ENSSPAG00000004654	vars2	99	71.311	ENSORLG00020018584	vars2	99	71.311	Oryzias_latipes_hni
ENSSPAG00000004654	vars2	94	73.058	ENSORLG00015010408	vars2	99	71.311	Oryzias_latipes_hsok
ENSSPAG00000004654	vars2	95	73.152	ENSOMEG00000008360	vars2	97	72.701	Oryzias_melastigma
ENSSPAG00000004654	vars2	95	48.701	ENSOGAG00000006087	VARS2	91	49.602	Otolemur_garnettii
ENSSPAG00000004654	vars2	96	48.061	ENSOARG00000010844	VARS2	92	49.355	Ovis_aries
ENSSPAG00000004654	vars2	95	49.278	ENSPPAG00000041141	VARS2	93	50.350	Pan_paniscus
ENSSPAG00000004654	vars2	97	47.822	ENSPPRG00000006751	VARS2	91	50.000	Panthera_pardus
ENSSPAG00000004654	vars2	96	48.577	ENSPTIG00000017799	VARS2	97	50.100	Panthera_tigris_altaica
ENSSPAG00000004654	vars2	95	49.278	ENSPTRG00000034497	VARS2	93	50.350	Pan_troglodytes
ENSSPAG00000004654	vars2	95	48.893	ENSPANG00000018481	VARS2	92	51.189	Papio_anubis
ENSSPAG00000004654	vars2	96	66.958	ENSPKIG00000011372	vars2	99	65.760	Paramormyrops_kingsleyae
ENSSPAG00000004654	vars2	59	59.277	ENSPSIG00000006206	VARS2	92	59.225	Pelodiscus_sinensis
ENSSPAG00000004654	vars2	99	69.581	ENSPMGG00000000465	vars2	99	69.581	Periophthalmus_magnuspinnatus
ENSSPAG00000004654	vars2	97	49.096	ENSPEMG00000014691	Vars2	92	50.200	Peromyscus_maniculatus_bairdii
ENSSPAG00000004654	vars2	94	49.459	ENSPCIG00000015040	VARS2	93	50.406	Phascolarctos_cinereus
ENSSPAG00000004654	vars2	98	74.264	ENSPFOG00000017616	vars2	97	75.214	Poecilia_formosa
ENSSPAG00000004654	vars2	100	73.216	ENSPLAG00000019778	vars2	99	74.143	Poecilia_latipinna
ENSSPAG00000004654	vars2	100	73.309	ENSPMEG00000011123	vars2	99	74.235	Poecilia_mexicana
ENSSPAG00000004654	vars2	97	66.920	ENSPREG00000014998	vars2	99	66.920	Poecilia_reticulata
ENSSPAG00000004654	vars2	97	48.755	ENSPPYG00000016424	VARS2	93	49.901	Pongo_abelii
ENSSPAG00000004654	vars2	59	61.290	ENSPCAG00000006946	VARS2	59	61.290	Procavia_capensis
ENSSPAG00000004654	vars2	98	47.053	ENSPCOG00000014839	VARS2	90	48.327	Propithecus_coquereli
ENSSPAG00000004654	vars2	98	48.536	ENSPVAG00000004197	VARS2	92	49.802	Pteropus_vampyrus
ENSSPAG00000004654	vars2	92	72.878	ENSPNYG00000010314	vars2	100	72.953	Pundamilia_nyererei
ENSSPAG00000004654	vars2	96	69.156	ENSPNAG00000026793	vars2	97	69.194	Pygocentrus_nattereri
ENSSPAG00000004654	vars2	98	48.912	ENSRNOG00000000833	Vars2	92	50.100	Rattus_norvegicus
ENSSPAG00000004654	vars2	95	48.508	ENSRBIG00000032725	VARS2	93	49.650	Rhinopithecus_bieti
ENSSPAG00000004654	vars2	95	48.508	ENSRROG00000043847	VARS2	93	49.650	Rhinopithecus_roxellana
ENSSPAG00000004654	vars2	97	47.753	ENSSBOG00000033240	VARS2	91	48.783	Saimiri_boliviensis_boliviensis
ENSSPAG00000004654	vars2	96	49.612	ENSSHAG00000009307	VARS2	92	50.150	Sarcophilus_harrisii
ENSSPAG00000004654	vars2	100	64.815	ENSSFOG00015016187	vars2	99	65.463	Scleropages_formosus
ENSSPAG00000004654	vars2	99	77.736	ENSSMAG00000020842	vars2	99	77.736	Scophthalmus_maximus
ENSSPAG00000004654	vars2	100	79.093	ENSSDUG00000011598	vars2	99	80.389	Seriola_dumerili
ENSSPAG00000004654	vars2	100	80.076	ENSSLDG00000015492	vars2	99	80.737	Seriola_lalandi_dorsalis
ENSSPAG00000004654	vars2	51	57.778	ENSSARG00000003786	-	60	57.778	Sorex_araneus
ENSSPAG00000004654	vars2	79	57.313	ENSSPUG00000014700	VARS2	87	57.313	Sphenodon_punctatus
ENSSPAG00000004654	vars2	97	49.251	ENSSSCG00000001384	VARS2	90	54.051	Sus_scrofa
ENSSPAG00000004654	vars2	99	71.778	ENSTRUG00000005264	vars2	99	72.381	Takifugu_rubripes
ENSSPAG00000004654	vars2	99	68.109	ENSTNIG00000005916	vars2	98	68.674	Tetraodon_nigroviridis
ENSSPAG00000004654	vars2	74	54.897	ENSTTRG00000012243	VARS2	74	62.016	Tursiops_truncatus
ENSSPAG00000004654	vars2	97	49.571	ENSUAMG00000026124	VARS2	99	50.964	Ursus_americanus
ENSSPAG00000004654	vars2	97	49.523	ENSUMAG00000019894	VARS2	93	50.546	Ursus_maritimus
ENSSPAG00000004654	vars2	98	48.728	ENSVVUG00000010754	VARS2	88	50.299	Vulpes_vulpes
ENSSPAG00000004654	vars2	88	51.204	ENSXETG00000003036	vars2	98	51.204	Xenopus_tropicalis
ENSSPAG00000004654	vars2	97	76.834	ENSXCOG00000003455	vars2	99	76.834	Xiphophorus_couchianus
ENSSPAG00000004654	vars2	99	75.648	ENSXMAG00000013523	vars2	99	75.648	Xiphophorus_maculatus