EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000004898 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA binding protein fox-1 homolog 3-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 60838 bases
Position: chrKK581359.1:116757-177594
Accession: 103369438
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000006367	Fox-1_C	PF12414.8	9.1e-38	1	1
ENSSPAP00000006367	RRM_1	PF00076.22	8.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000006498	-	951	XM_008298155	ENSSPAP00000006367	316 (aa)	XP_008296377	-

Gene Model

Click here to download ENSSPAG00000004898's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000004898's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000004898	-	52	64.103	ENSSPAG00000013681	rbfox2	67	50.000
ENSSPAG00000004898	-	85	62.667	ENSSPAG00000009723	rbfox1	75	63.158
ENSSPAG00000004898	-	56	68.342	ENSSPAG00000016620	rbfox1l	77	52.862
ENSSPAG00000004898	-	56	61.574	ENSSPAG00000016272	-	55	60.236
ENSSPAG00000004898	-	85	71.429	ENSSPAG00000017571	rbfox3b	71	70.543

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000004898	-	75	73.725	ENSG00000167281	RBFOX3	87	74.453	Homo_sapiens
ENSSPAG00000004898	-	85	78.049	ENSAPOG00000021630	rbfox3b	74	77.574	Acanthochromis_polyacanthus
ENSSPAG00000004898	-	74	87.347	ENSAPOG00000015658	-	70	87.347	Acanthochromis_polyacanthus
ENSSPAG00000004898	-	75	70.330	ENSAMEG00000014170	RBFOX3	73	71.233	Ailuropoda_melanoleuca
ENSSPAG00000004898	-	95	71.131	ENSACIG00000003768	-	83	74.667	Amphilophus_citrinellus
ENSSPAG00000004898	-	85	73.171	ENSACIG00000010817	rbfox3b	85	72.426	Amphilophus_citrinellus
ENSSPAG00000004898	-	85	78.049	ENSAOCG00000012358	rbfox3b	74	77.574	Amphiprion_ocellaris
ENSSPAG00000004898	-	79	92.045	ENSAOCG00000010786	-	69	92.045	Amphiprion_ocellaris
ENSSPAG00000004898	-	81	80.137	ENSAPEG00000015891	-	72	80.137	Amphiprion_percula
ENSSPAG00000004898	-	70	76.151	ENSAPEG00000019081	rbfox3b	65	75.446	Amphiprion_percula
ENSSPAG00000004898	-	85	67.823	ENSATEG00000019945	rbfox3b	87	68.212	Anabas_testudineus
ENSSPAG00000004898	-	81	79.412	ENSATEG00000023101	-	83	79.412	Anabas_testudineus
ENSSPAG00000004898	-	77	74.046	ENSACAG00000016093	RBFOX3	76	75.182	Anolis_carolinensis
ENSSPAG00000004898	-	75	72.941	ENSANAG00000023457	RBFOX3	87	73.723	Aotus_nancymaae
ENSSPAG00000004898	-	85	77.193	ENSACLG00000020011	rbfox3b	86	77.037	Astatotilapia_calliptera
ENSSPAG00000004898	-	85	84.321	ENSACLG00000025552	-	74	84.191	Astatotilapia_calliptera
ENSSPAG00000004898	-	85	74.306	ENSAMXG00000042841	rbfox3b	77	74.359	Astyanax_mexicanus
ENSSPAG00000004898	-	75	78.906	ENSAMXG00000037246	rbfox3a	82	79.273	Astyanax_mexicanus
ENSSPAG00000004898	-	75	74.510	ENSBTAG00000006280	RBFOX3	74	74.820	Bos_taurus
ENSSPAG00000004898	-	66	70.306	ENSCJAG00000009563	RBFOX3	88	63.125	Callithrix_jacchus
ENSSPAG00000004898	-	60	80.097	ENSCAFG00000005547	RBFOX3	76	82.791	Canis_familiaris
ENSSPAG00000004898	-	75	62.252	ENSCAFG00020008126	RBFOX3	85	64.486	Canis_lupus_dingo
ENSSPAG00000004898	-	75	61.589	ENSCHIG00000009124	RBFOX3	85	63.863	Capra_hircus
ENSSPAG00000004898	-	75	61.462	ENSTSYG00000029617	RBFOX3	88	63.750	Carlito_syrichta
ENSSPAG00000004898	-	78	62.058	ENSCPOG00000021703	RBFOX3	88	62.848	Cavia_porcellus
ENSSPAG00000004898	-	75	72.941	ENSCCAG00000028450	RBFOX3	87	73.723	Cebus_capucinus
ENSSPAG00000004898	-	75	73.725	ENSCATG00000018349	RBFOX3	87	74.453	Cercocebus_atys
ENSSPAG00000004898	-	81	62.617	ENSCLAG00000006449	RBFOX3	88	63.551	Chinchilla_lanigera
ENSSPAG00000004898	-	75	73.725	ENSCSAG00000002355	RBFOX3	87	74.453	Chlorocebus_sabaeus
ENSSPAG00000004898	-	76	75.194	ENSCPBG00000010904	RBFOX3	88	75.812	Chrysemys_picta_bellii
ENSSPAG00000004898	-	75	73.725	ENSCANG00000043120	RBFOX3	87	74.453	Colobus_angolensis_palliatus
ENSSPAG00000004898	-	75	61.589	ENSCGRG00001019476	Rbfox3	88	63.665	Cricetulus_griseus_chok1gshd
ENSSPAG00000004898	-	75	61.589	ENSCGRG00000003268	Rbfox3	88	63.665	Cricetulus_griseus_crigri
ENSSPAG00000004898	-	97	58.589	ENSCSEG00000020606	RBFOX3	84	62.456	Cynoglossus_semilaevis
ENSSPAG00000004898	-	81	80.370	ENSCSEG00000015567	RBFOX3	72	80.370	Cynoglossus_semilaevis
ENSSPAG00000004898	-	85	78.049	ENSCVAG00000006882	rbfox3b	74	77.574	Cyprinodon_variegatus
ENSSPAG00000004898	-	75	79.688	ENSDARG00000010083	rbfox3a	83	80.000	Danio_rerio
ENSSPAG00000004898	-	85	65.614	ENSDARG00000074310	rbfox3b	82	72.527	Danio_rerio
ENSSPAG00000004898	-	57	63.786	ENSDNOG00000039391	RBFOX3	53	91.176	Dasypus_novemcinctus
ENSSPAG00000004898	-	81	53.292	ENSDORG00000005352	Rbfox3	86	52.681	Dipodomys_ordii
ENSSPAG00000004898	-	79	53.818	ENSEBUG00000013559	RBFOX3	71	54.297	Eptatretus_burgeri
ENSSPAG00000004898	-	80	66.667	ENSEBUG00000002129	RBFOX3	85	64.505	Eptatretus_burgeri
ENSSPAG00000004898	-	75	74.902	ENSEASG00005005059	RBFOX3	90	72.028	Equus_asinus_asinus
ENSSPAG00000004898	-	75	75.294	ENSECAG00000023811	RBFOX3	90	72.378	Equus_caballus
ENSSPAG00000004898	-	70	75.000	ENSEEUG00000013974	RBFOX3	61	88.235	Erinaceus_europaeus
ENSSPAG00000004898	-	85	77.003	ENSELUG00000017963	rbfox3b	85	69.650	Esox_lucius
ENSSPAG00000004898	-	75	74.118	ENSFCAG00000002555	RBFOX3	87	74.818	Felis_catus
ENSSPAG00000004898	-	75	55.944	ENSFALG00000012288	RBFOX3	75	57.705	Ficedula_albicollis
ENSSPAG00000004898	-	78	59.797	ENSFDAG00000007489	RBFOX3	88	60.714	Fukomys_damarensis
ENSSPAG00000004898	-	85	71.324	ENSFHEG00000008550	rbfox3b	85	70.428	Fundulus_heteroclitus
ENSSPAG00000004898	-	85	57.658	ENSGMOG00000019304	-	79	66.540	Gadus_morhua
ENSSPAG00000004898	-	76	75.581	ENSGALG00000032889	RBFOX3	77	76.173	Gallus_gallus
ENSSPAG00000004898	-	83	76.619	ENSGAFG00000005025	rbfox3b	78	76.753	Gambusia_affinis
ENSSPAG00000004898	-	81	68.012	ENSGACG00000002138	-	85	69.255	Gasterosteus_aculeatus
ENSSPAG00000004898	-	76	75.194	ENSGAGG00000020025	RBFOX3	91	76.389	Gopherus_agassizii
ENSSPAG00000004898	-	75	73.725	ENSGGOG00000012546	RBFOX3	87	74.453	Gorilla_gorilla
ENSSPAG00000004898	-	85	83.972	ENSHBUG00000023098	-	78	83.824	Haplochromis_burtoni
ENSSPAG00000004898	-	85	77.193	ENSHBUG00000018099	rbfox3b	73	77.037	Haplochromis_burtoni
ENSSPAG00000004898	-	78	62.701	ENSHGLG00000008679	RBFOX3	88	62.769	Heterocephalus_glaber_female
ENSSPAG00000004898	-	78	59.615	ENSHGLG00100014739	RBFOX3	79	68.333	Heterocephalus_glaber_male
ENSSPAG00000004898	-	74	73.913	ENSHCOG00000007444	RBFOX3	65	74.104	Hippocampus_comes
ENSSPAG00000004898	-	70	81.435	ENSHCOG00000001863	RBFOX3	79	71.852	Hippocampus_comes
ENSSPAG00000004898	-	75	77.344	ENSIPUG00000012010	rbfox3a	85	75.261	Ictalurus_punctatus
ENSSPAG00000004898	-	75	71.315	ENSIPUG00000021966	rbfox3b	88	72.881	Ictalurus_punctatus
ENSSPAG00000004898	-	75	57.724	ENSSTOG00000026817	RBFOX3	86	59.623	Ictidomys_tridecemlineatus
ENSSPAG00000004898	-	75	60.596	ENSJJAG00000014167	Rbfox3	88	63.551	Jaculus_jaculus
ENSSPAG00000004898	-	85	78.049	ENSKMAG00000006726	rbfox3b	74	77.574	Kryptolebias_marmoratus
ENSSPAG00000004898	-	85	78.049	ENSLBEG00000004030	rbfox3b	85	72.426	Labrus_bergylta
ENSSPAG00000004898	-	88	81.290	ENSLBEG00000022508	-	88	81.290	Labrus_bergylta
ENSSPAG00000004898	-	76	63.287	ENSLACG00000018409	-	80	65.190	Latimeria_chalumnae
ENSSPAG00000004898	-	75	81.496	ENSLOCG00000012267	rbfox3a	82	81.685	Lepisosteus_oculatus
ENSSPAG00000004898	-	75	66.197	ENSLAFG00000016623	RBFOX3	85	63.438	Loxodonta_africana
ENSSPAG00000004898	-	75	61.462	ENSMFAG00000002247	RBFOX3	88	63.750	Macaca_fascicularis
ENSSPAG00000004898	-	75	73.725	ENSMMUG00000023028	RBFOX3	87	74.453	Macaca_mulatta
ENSSPAG00000004898	-	75	73.725	ENSMNEG00000041147	RBFOX3	87	74.453	Macaca_nemestrina
ENSSPAG00000004898	-	75	73.725	ENSMLEG00000025686	RBFOX3	87	74.453	Mandrillus_leucophaeus
ENSSPAG00000004898	-	85	69.474	ENSMAMG00000019810	rbfox3b	84	68.519	Mastacembelus_armatus
ENSSPAG00000004898	-	85	82.105	ENSMAMG00000020600	-	82	82.105	Mastacembelus_armatus
ENSSPAG00000004898	-	85	77.193	ENSMZEG00005000781	rbfox3b	74	77.037	Maylandia_zebra
ENSSPAG00000004898	-	90	64.024	ENSMZEG00005003055	-	71	67.213	Maylandia_zebra
ENSSPAG00000004898	-	56	69.588	ENSMGAG00000005600	RBFOX3	73	69.588	Meleagris_gallopavo
ENSSPAG00000004898	-	81	61.371	ENSMAUG00000013543	Rbfox3	88	62.305	Mesocricetus_auratus
ENSSPAG00000004898	-	79	73.333	ENSMICG00000014898	RBFOX3	87	74.453	Microcebus_murinus
ENSSPAG00000004898	-	75	61.589	ENSMOCG00000015373	Rbfox3	88	63.551	Microtus_ochrogaster
ENSSPAG00000004898	-	85	76.389	ENSMMOG00000020193	rbfox3b	79	71.631	Mola_mola
ENSSPAG00000004898	-	75	74.902	ENSMODG00000002089	RBFOX3	76	75.547	Monodelphis_domestica
ENSSPAG00000004898	-	85	76.655	ENSMALG00000020407	rbfox3b	74	76.471	Monopterus_albus
ENSSPAG00000004898	-	85	86.411	ENSMALG00000018270	-	83	79.487	Monopterus_albus
ENSSPAG00000004898	-	75	73.725	MGP_CAROLIEiJ_G0017487	Rbfox3	96	79.137	Mus_caroli
ENSSPAG00000004898	-	81	73.723	ENSMUSG00000025576	Rbfox3	96	79.137	Mus_musculus
ENSSPAG00000004898	-	75	74.118	MGP_PahariEiJ_G0018614	Rbfox3	96	79.856	Mus_pahari
ENSSPAG00000004898	-	75	73.725	MGP_SPRETEiJ_G0018331	Rbfox3	96	79.137	Mus_spretus
ENSSPAG00000004898	-	75	65.753	ENSMPUG00000012319	RBFOX3	80	66.881	Mustela_putorius_furo
ENSSPAG00000004898	-	75	61.589	ENSNGAG00000018006	Rbfox3	88	63.863	Nannospalax_galili
ENSSPAG00000004898	-	85	76.408	ENSNBRG00000010102	rbfox3b	73	76.208	Neolamprologus_brichardi
ENSSPAG00000004898	-	74	81.600	ENSNBRG00000022885	-	73	75.556	Neolamprologus_brichardi
ENSSPAG00000004898	-	53	69.364	ENSNLEG00000000153	-	58	72.152	Nomascus_leucogenys
ENSSPAG00000004898	-	71	53.333	ENSMEUG00000004218	-	88	46.057	Notamacropus_eugenii
ENSSPAG00000004898	-	52	69.461	ENSOPRG00000016279	-	53	88.235	Ochotona_princeps
ENSSPAG00000004898	-	81	74.453	ENSODEG00000009433	RBFOX3	87	74.453	Octodon_degus
ENSSPAG00000004898	-	85	84.321	ENSONIG00000007282	-	79	84.191	Oreochromis_niloticus
ENSSPAG00000004898	-	85	78.049	ENSONIG00000009549	rbfox3b	85	67.628	Oreochromis_niloticus
ENSSPAG00000004898	-	85	78.049	ENSORLG00000000905	rbfox3b	58	77.574	Oryzias_latipes
ENSSPAG00000004898	-	85	78.049	ENSORLG00020018030	rbfox3b	74	77.574	Oryzias_latipes_hni
ENSSPAG00000004898	-	85	77.700	ENSORLG00015009200	rbfox3b	84	70.039	Oryzias_latipes_hsok
ENSSPAG00000004898	-	73	68.966	ENSOMEG00000014677	rbfox3b	76	67.841	Oryzias_melastigma
ENSSPAG00000004898	-	75	74.510	ENSOGAG00000029595	RBFOX3	72	75.182	Otolemur_garnettii
ENSSPAG00000004898	-	57	65.000	ENSOARG00000002908	RBFOX3	62	63.008	Ovis_aries
ENSSPAG00000004898	-	75	73.725	ENSPPAG00000025383	RBFOX3	95	74.545	Pan_paniscus
ENSSPAG00000004898	-	75	62.034	ENSPPRG00000007819	RBFOX3	88	65.287	Panthera_pardus
ENSSPAG00000004898	-	75	73.725	ENSPTRG00000009727	RBFOX3	87	74.453	Pan_troglodytes
ENSSPAG00000004898	-	75	73.725	ENSPANG00000019837	RBFOX3	87	74.453	Papio_anubis
ENSSPAG00000004898	-	81	79.562	ENSPKIG00000010299	rbfox3a	79	79.562	Paramormyrops_kingsleyae
ENSSPAG00000004898	-	97	59.443	ENSPKIG00000022633	-	74	65.809	Paramormyrops_kingsleyae
ENSSPAG00000004898	-	79	75.758	ENSPMGG00000008000	rbfox3b	78	75.397	Periophthalmus_magnuspinnatus
ENSSPAG00000004898	-	75	61.921	ENSPEMG00000010500	Rbfox3	88	63.863	Peromyscus_maniculatus_bairdii
ENSSPAG00000004898	-	81	68.077	ENSPCIG00000005766	RBFOX3	89	64.798	Phascolarctos_cinereus
ENSSPAG00000004898	-	85	78.049	ENSPFOG00000018294	rbfox3b	71	77.574	Poecilia_formosa
ENSSPAG00000004898	-	63	76.279	ENSPLAG00000000481	rbfox3b	65	76.279	Poecilia_latipinna
ENSSPAG00000004898	-	85	71.324	ENSPMEG00000022997	rbfox3b	85	71.206	Poecilia_mexicana
ENSSPAG00000004898	-	85	77.778	ENSPREG00000012886	rbfox3b	78	77.289	Poecilia_reticulata
ENSSPAG00000004898	-	75	71.250	ENSPPYG00000008704	RBFOX3	79	72.201	Pongo_abelii
ENSSPAG00000004898	-	75	59.667	ENSPCAG00000001401	RBFOX3	88	62.696	Procavia_capensis
ENSSPAG00000004898	-	79	61.709	ENSPCOG00000012689	RBFOX3	89	63.750	Propithecus_coquereli
ENSSPAG00000004898	-	75	54.000	ENSPVAG00000015243	RBFOX3	88	57.500	Pteropus_vampyrus
ENSSPAG00000004898	-	70	75.630	ENSPNYG00000010414	rbfox3b	66	74.888	Pundamilia_nyererei
ENSSPAG00000004898	-	71	82.573	ENSPNYG00000009079	-	70	76.753	Pundamilia_nyererei
ENSSPAG00000004898	-	75	79.297	ENSPNAG00000002889	rbfox3a	74	79.636	Pygocentrus_nattereri
ENSSPAG00000004898	-	85	60.741	ENSPNAG00000018173	rbfox3b	76	61.176	Pygocentrus_nattereri
ENSSPAG00000004898	-	75	74.118	ENSRNOG00000003386	Rbfox3	90	71.329	Rattus_norvegicus
ENSSPAG00000004898	-	75	73.725	ENSRBIG00000040449	RBFOX3	75	74.453	Rhinopithecus_bieti
ENSSPAG00000004898	-	75	73.725	ENSRROG00000000766	RBFOX3	87	74.453	Rhinopithecus_roxellana
ENSSPAG00000004898	-	75	72.941	ENSSBOG00000031591	RBFOX3	87	73.723	Saimiri_boliviensis_boliviensis
ENSSPAG00000004898	-	77	68.699	ENSSHAG00000016076	RBFOX3	85	68.726	Sarcophilus_harrisii
ENSSPAG00000004898	-	74	64.542	ENSSFOG00015004716	RBFOX3	76	65.556	Scleropages_formosus
ENSSPAG00000004898	-	75	81.102	ENSSFOG00015023260	rbfox3a	74	81.319	Scleropages_formosus
ENSSPAG00000004898	-	85	83.217	ENSSMAG00000019052	-	87	82.657	Scophthalmus_maximus
ENSSPAG00000004898	-	85	72.368	ENSSMAG00000012618	rbfox3b	65	72.664	Scophthalmus_maximus
ENSSPAG00000004898	-	85	71.324	ENSSDUG00000023183	rbfox3b	85	70.428	Seriola_dumerili
ENSSPAG00000004898	-	84	75.801	ENSSDUG00000015801	-	69	83.133	Seriola_dumerili
ENSSPAG00000004898	-	85	78.049	ENSSLDG00000000149	rbfox3b	74	77.574	Seriola_lalandi_dorsalis
ENSSPAG00000004898	-	89	81.017	ENSSLDG00000016098	-	82	75.000	Seriola_lalandi_dorsalis
ENSSPAG00000004898	-	75	74.902	ENSSPUG00000011733	RBFOX3	86	75.547	Sphenodon_punctatus
ENSSPAG00000004898	-	66	77.434	ENSSSCG00000039498	RBFOX3	88	65.411	Sus_scrofa
ENSSPAG00000004898	-	89	68.627	ENSTRUG00000004894	rbfox3b	75	72.015	Takifugu_rubripes
ENSSPAG00000004898	-	84	68.790	ENSTNIG00000011278	rbfox3b	75	67.893	Tetraodon_nigroviridis
ENSSPAG00000004898	-	55	52.542	ENSTBEG00000004296	-	63	55.085	Tupaia_belangeri
ENSSPAG00000004898	-	75	55.333	ENSTTRG00000003676	RBFOX3	88	57.994	Tursiops_truncatus
ENSSPAG00000004898	-	75	75.294	ENSUAMG00000004668	RBFOX3	87	75.912	Ursus_americanus
ENSSPAG00000004898	-	75	74.902	ENSVVUG00000017864	RBFOX3	87	75.547	Vulpes_vulpes
ENSSPAG00000004898	-	79	57.877	ENSXETG00000020236	rbfox3	74	59.122	Xenopus_tropicalis
ENSSPAG00000004898	-	85	77.003	ENSXCOG00000018262	rbfox3b	86	72.325	Xiphophorus_couchianus
ENSSPAG00000004898	-	85	78.049	ENSXMAG00000012939	rbfox3b	74	77.574	Xiphophorus_maculatus