EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000005029 (Gene tree)
Gene ID: 103356838
Gene Symbol: trnau1apa
Alias: trnau1ap|zgc:110606
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 5783 bases
Position: chrKK580077.1:1470082-1475864
Accession: 103356838
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000006515	RRM_1	PF00076.22	8.8e-27	1	2
ENSSPAP00000006515	RRM_1	PF00076.22	8.8e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000006650	-	2262	XM_008281141	ENSSPAP00000006515	307 (aa)	XP_008279363	UPI0004986998

Gene Model

Click here to download ENSSPAG00000005029's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000005029's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000005029	trnau1apa	94	45.574	ENSSPAG00000006917	trnau1apb	95	46.780
ENSSPAG00000005029	trnau1apa	55	32.386	ENSSPAG00000004511	-	60	32.386
ENSSPAG00000005029	trnau1apa	55	31.429	ENSSPAG00000008228	tia1l	60	31.250
ENSSPAG00000005029	trnau1apa	56	30.435	ENSSPAG00000019265	pabpc1b	62	30.435

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000005029	trnau1apa	98	57.980	ENSG00000180098	TRNAU1AP	98	58.689	Homo_sapiens
ENSSPAG00000005029	trnau1apa	100	93.831	ENSAPOG00000007148	TRNAU1AP	100	93.919	Acanthochromis_polyacanthus
ENSSPAG00000005029	trnau1apa	98	57.655	ENSAMEG00000011367	TRNAU1AP	98	58.940	Ailuropoda_melanoleuca
ENSSPAG00000005029	trnau1apa	91	97.753	ENSACIG00000004161	trnau1apa	93	97.753	Amphilophus_citrinellus
ENSSPAG00000005029	trnau1apa	100	93.811	ENSAOCG00000008056	trnau1apa	100	93.811	Amphiprion_ocellaris
ENSSPAG00000005029	trnau1apa	100	93.811	ENSAPEG00000008868	trnau1apa	100	93.811	Amphiprion_percula
ENSSPAG00000005029	trnau1apa	100	89.241	ENSATEG00000012140	trnau1apa	100	88.924	Anabas_testudineus
ENSSPAG00000005029	trnau1apa	92	60.279	ENSAPLG00000002606	TRNAU1AP	99	60.279	Anas_platyrhynchos
ENSSPAG00000005029	trnau1apa	74	36.681	ENSACAG00000004205	-	86	37.805	Anolis_carolinensis
ENSSPAG00000005029	trnau1apa	93	50.345	ENSACAG00000003995	-	95	50.690	Anolis_carolinensis
ENSSPAG00000005029	trnau1apa	98	57.980	ENSANAG00000018976	TRNAU1AP	98	58.689	Aotus_nancymaae
ENSSPAG00000005029	trnau1apa	100	87.987	ENSACLG00000018515	trnau1apa	100	88.312	Astatotilapia_calliptera
ENSSPAG00000005029	trnau1apa	92	71.591	ENSAMXG00000029240	-	95	71.591	Astyanax_mexicanus
ENSSPAG00000005029	trnau1apa	99	55.128	ENSAMXG00000013750	trnau1apa	97	54.487	Astyanax_mexicanus
ENSSPAG00000005029	trnau1apa	98	57.655	ENSBTAG00000010393	TRNAU1AP	98	58.361	Bos_taurus
ENSSPAG00000005029	trnau1apa	98	57.980	ENSCJAG00000009717	TRNAU1AP	98	58.689	Callithrix_jacchus
ENSSPAG00000005029	trnau1apa	98	57.980	ENSCAFG00000011735	TRNAU1AP	96	59.524	Canis_familiaris
ENSSPAG00000005029	trnau1apa	98	57.980	ENSCAFG00020023584	TRNAU1AP	96	59.524	Canis_lupus_dingo
ENSSPAG00000005029	trnau1apa	99	57.419	ENSCHIG00000023215	TRNAU1AP	99	57.419	Capra_hircus
ENSSPAG00000005029	trnau1apa	98	57.980	ENSTSYG00000003506	TRNAU1AP	98	58.689	Carlito_syrichta
ENSSPAG00000005029	trnau1apa	98	57.980	ENSCPOG00000001925	TRNAU1AP	96	59.524	Cavia_porcellus
ENSSPAG00000005029	trnau1apa	98	57.980	ENSCCAG00000037506	TRNAU1AP	98	58.689	Cebus_capucinus
ENSSPAG00000005029	trnau1apa	98	57.980	ENSCATG00000044617	TRNAU1AP	98	57.980	Cercocebus_atys
ENSSPAG00000005029	trnau1apa	98	57.980	ENSCLAG00000008223	TRNAU1AP	96	59.524	Chinchilla_lanigera
ENSSPAG00000005029	trnau1apa	98	57.980	ENSCSAG00000001014	TRNAU1AP	98	57.980	Chlorocebus_sabaeus
ENSSPAG00000005029	trnau1apa	94	57.483	ENSCPBG00000000121	TRNAU1AP	99	57.823	Chrysemys_picta_bellii
ENSSPAG00000005029	trnau1apa	52	50.000	ENSCSAVG00000011781	-	84	50.000	Ciona_savignyi
ENSSPAG00000005029	trnau1apa	98	50.820	ENSCANG00000041949	TRNAU1AP	98	52.792	Colobus_angolensis_palliatus
ENSSPAG00000005029	trnau1apa	98	57.980	ENSCGRG00001004713	Trnau1ap	98	57.980	Cricetulus_griseus_chok1gshd
ENSSPAG00000005029	trnau1apa	98	57.980	ENSCGRG00000014532	Trnau1ap	98	57.980	Cricetulus_griseus_crigri
ENSSPAG00000005029	trnau1apa	100	77.389	ENSCSEG00000006663	trnau1apa	100	75.159	Cynoglossus_semilaevis
ENSSPAG00000005029	trnau1apa	99	82.026	ENSCVAG00000018069	trnau1apa	99	83.007	Cyprinodon_variegatus
ENSSPAG00000005029	trnau1apa	99	51.118	ENSDARG00000101323	trnau1apa	95	50.479	Danio_rerio
ENSSPAG00000005029	trnau1apa	98	57.980	ENSDNOG00000033009	TRNAU1AP	98	57.980	Dasypus_novemcinctus
ENSSPAG00000005029	trnau1apa	57	59.322	ENSDNOG00000047959	-	89	61.047	Dasypus_novemcinctus
ENSSPAG00000005029	trnau1apa	98	55.921	ENSDORG00000006349	Trnau1ap	97	60.417	Dipodomys_ordii
ENSSPAG00000005029	trnau1apa	93	35.185	FBgn0031607	CG15440	96	33.333	Drosophila_melanogaster
ENSSPAG00000005029	trnau1apa	84	54.962	ENSETEG00000012594	TRNAU1AP	98	54.962	Echinops_telfairi
ENSSPAG00000005029	trnau1apa	68	46.591	ENSEBUG00000006349	-	56	46.591	Eptatretus_burgeri
ENSSPAG00000005029	trnau1apa	98	57.980	ENSEASG00005010062	TRNAU1AP	90	68.493	Equus_asinus_asinus
ENSSPAG00000005029	trnau1apa	98	57.980	ENSECAG00000012980	TRNAU1AP	90	68.493	Equus_caballus
ENSSPAG00000005029	trnau1apa	100	73.633	ENSELUG00000017686	trnau1apa	100	75.641	Esox_lucius
ENSSPAG00000005029	trnau1apa	93	80.682	ENSELUG00000022790	-	95	80.682	Esox_lucius
ENSSPAG00000005029	trnau1apa	98	57.980	ENSFCAG00000013401	TRNAU1AP	98	58.689	Felis_catus
ENSSPAG00000005029	trnau1apa	94	57.483	ENSFALG00000001371	TRNAU1AP	99	57.823	Ficedula_albicollis
ENSSPAG00000005029	trnau1apa	99	57.742	ENSFDAG00000018599	TRNAU1AP	99	57.742	Fukomys_damarensis
ENSSPAG00000005029	trnau1apa	78	88.525	ENSFHEG00000018232	trnau1apa	85	86.381	Fundulus_heteroclitus
ENSSPAG00000005029	trnau1apa	100	66.134	ENSGMOG00000016508	trnau1apa	99	66.134	Gadus_morhua
ENSSPAG00000005029	trnau1apa	98	57.705	ENSGALG00000001310	-	98	57.705	Gallus_gallus
ENSSPAG00000005029	trnau1apa	69	41.892	ENSGALG00000012721	C2H6orf52	79	41.921	Gallus_gallus
ENSSPAG00000005029	trnau1apa	79	88.163	ENSGAFG00000004928	trnau1apa	97	87.059	Gambusia_affinis
ENSSPAG00000005029	trnau1apa	100	90.584	ENSGACG00000001443	trnau1apa	100	90.909	Gasterosteus_aculeatus
ENSSPAG00000005029	trnau1apa	94	57.823	ENSGAGG00000004940	TRNAU1AP	99	57.823	Gopherus_agassizii
ENSSPAG00000005029	trnau1apa	98	57.980	ENSGGOG00000003511	TRNAU1AP	98	58.689	Gorilla_gorilla
ENSSPAG00000005029	trnau1apa	100	97.037	ENSHBUG00000002510	trnau1apa	94	97.037	Haplochromis_burtoni
ENSSPAG00000005029	trnau1apa	98	57.980	ENSHGLG00000010380	TRNAU1AP	96	59.524	Heterocephalus_glaber_female
ENSSPAG00000005029	trnau1apa	98	56.026	ENSHGLG00100012699	TRNAU1AP	98	56.721	Heterocephalus_glaber_male
ENSSPAG00000005029	trnau1apa	99	74.038	ENSHCOG00000014770	trnau1apa	99	71.474	Hippocampus_comes
ENSSPAG00000005029	trnau1apa	98	57.980	ENSSTOG00000000079	TRNAU1AP	98	58.689	Ictidomys_tridecemlineatus
ENSSPAG00000005029	trnau1apa	98	57.655	ENSJJAG00000010128	Trnau1ap	98	57.655	Jaculus_jaculus
ENSSPAG00000005029	trnau1apa	100	86.039	ENSKMAG00000001230	trnau1apa	100	87.013	Kryptolebias_marmoratus
ENSSPAG00000005029	trnau1apa	100	83.072	ENSLBEG00000011683	trnau1apa	100	82.445	Labrus_bergylta
ENSSPAG00000005029	trnau1apa	99	52.769	ENSLACG00000005541	TRNAU1AP	99	52.104	Latimeria_chalumnae
ENSSPAG00000005029	trnau1apa	98	60.396	ENSLOCG00000004041	trnau1apa	99	60.066	Lepisosteus_oculatus
ENSSPAG00000005029	trnau1apa	98	58.306	ENSLAFG00000007628	TRNAU1AP	98	58.306	Loxodonta_africana
ENSSPAG00000005029	trnau1apa	98	57.980	ENSMFAG00000043751	TRNAU1AP	98	57.980	Macaca_fascicularis
ENSSPAG00000005029	trnau1apa	98	57.980	ENSMMUG00000006561	TRNAU1AP	98	57.980	Macaca_mulatta
ENSSPAG00000005029	trnau1apa	98	57.980	ENSMNEG00000044201	TRNAU1AP	98	57.980	Macaca_nemestrina
ENSSPAG00000005029	trnau1apa	98	57.980	ENSMLEG00000015649	TRNAU1AP	98	57.980	Mandrillus_leucophaeus
ENSSPAG00000005029	trnau1apa	99	89.423	ENSMAMG00000001247	trnau1apa	100	89.423	Mastacembelus_armatus
ENSSPAG00000005029	trnau1apa	100	87.987	ENSMZEG00005017722	trnau1apa	100	88.312	Maylandia_zebra
ENSSPAG00000005029	trnau1apa	96	58.305	ENSMGAG00000002105	TRNAU1AP	99	58.644	Meleagris_gallopavo
ENSSPAG00000005029	trnau1apa	98	57.980	ENSMICG00000008386	TRNAU1AP	98	57.980	Microcebus_murinus
ENSSPAG00000005029	trnau1apa	98	57.980	ENSMOCG00000011189	Trnau1ap	98	57.980	Microtus_ochrogaster
ENSSPAG00000005029	trnau1apa	100	74.359	ENSMMOG00000012107	trnau1apa	99	74.359	Mola_mola
ENSSPAG00000005029	trnau1apa	98	57.655	ENSMODG00000010927	TRNAU1AP	98	57.655	Monodelphis_domestica
ENSSPAG00000005029	trnau1apa	100	91.318	ENSMALG00000016778	trnau1apa	100	91.318	Monopterus_albus
ENSSPAG00000005029	trnau1apa	98	57.980	MGP_CAROLIEiJ_G0026563	Trnau1ap	92	64.557	Mus_caroli
ENSSPAG00000005029	trnau1apa	98	57.980	ENSMUSG00000028898	Trnau1ap	92	64.557	Mus_musculus
ENSSPAG00000005029	trnau1apa	98	57.980	MGP_PahariEiJ_G0028896	Trnau1ap	84	76.271	Mus_pahari
ENSSPAG00000005029	trnau1apa	98	57.980	MGP_SPRETEiJ_G0027544	Trnau1ap	92	64.557	Mus_spretus
ENSSPAG00000005029	trnau1apa	99	58.065	ENSMPUG00000015511	TRNAU1AP	99	58.766	Mustela_putorius_furo
ENSSPAG00000005029	trnau1apa	98	57.980	ENSMLUG00000012586	TRNAU1AP	98	57.980	Myotis_lucifugus
ENSSPAG00000005029	trnau1apa	98	57.980	ENSNGAG00000015881	Trnau1ap	98	58.689	Nannospalax_galili
ENSSPAG00000005029	trnau1apa	100	75.884	ENSNBRG00000001758	trnau1apa	99	75.884	Neolamprologus_brichardi
ENSSPAG00000005029	trnau1apa	98	57.980	ENSNLEG00000009822	TRNAU1AP	98	58.689	Nomascus_leucogenys
ENSSPAG00000005029	trnau1apa	96	57.239	ENSMEUG00000006117	TRNAU1AP	99	57.000	Notamacropus_eugenii
ENSSPAG00000005029	trnau1apa	57	63.218	ENSOPRG00000007084	-	55	63.218	Ochotona_princeps
ENSSPAG00000005029	trnau1apa	98	57.980	ENSODEG00000002970	TRNAU1AP	96	59.524	Octodon_degus
ENSSPAG00000005029	trnau1apa	80	89.879	ENSONIG00000004715	trnau1apa	97	89.879	Oreochromis_niloticus
ENSSPAG00000005029	trnau1apa	93	47.751	ENSOANG00000005325	-	95	47.751	Ornithorhynchus_anatinus
ENSSPAG00000005029	trnau1apa	98	56.678	ENSOCUG00000011704	-	98	57.377	Oryctolagus_cuniculus
ENSSPAG00000005029	trnau1apa	98	48.397	ENSOCUG00000002353	-	98	50.000	Oryctolagus_cuniculus
ENSSPAG00000005029	trnau1apa	86	49.057	ENSOCUG00000006834	-	97	48.092	Oryctolagus_cuniculus
ENSSPAG00000005029	trnau1apa	100	82.085	ENSORLG00000010428	trnau1apa	100	81.759	Oryzias_latipes
ENSSPAG00000005029	trnau1apa	100	82.085	ENSORLG00020000926	trnau1ap	100	81.759	Oryzias_latipes_hni
ENSSPAG00000005029	trnau1apa	100	82.085	ENSORLG00015009858	trnau1ap	100	81.759	Oryzias_latipes_hsok
ENSSPAG00000005029	trnau1apa	100	82.085	ENSOMEG00000007873	trnau1apa	100	82.085	Oryzias_melastigma
ENSSPAG00000005029	trnau1apa	98	57.980	ENSOGAG00000002274	TRNAU1AP	98	57.980	Otolemur_garnettii
ENSSPAG00000005029	trnau1apa	99	57.419	ENSOARG00000002843	TRNAU1AP	99	57.419	Ovis_aries
ENSSPAG00000005029	trnau1apa	98	57.980	ENSPPAG00000033927	TRNAU1AP	98	58.689	Pan_paniscus
ENSSPAG00000005029	trnau1apa	98	57.980	ENSPPRG00000004416	TRNAU1AP	98	58.689	Panthera_pardus
ENSSPAG00000005029	trnau1apa	98	57.980	ENSPTIG00000016677	TRNAU1AP	98	58.689	Panthera_tigris_altaica
ENSSPAG00000005029	trnau1apa	91	52.330	ENSPTRG00000000434	-	94	51.220	Pan_troglodytes
ENSSPAG00000005029	trnau1apa	98	57.980	ENSPANG00000016019	TRNAU1AP	98	57.980	Papio_anubis
ENSSPAG00000005029	trnau1apa	93	60.481	ENSPKIG00000015511	trnau1apa	93	60.137	Paramormyrops_kingsleyae
ENSSPAG00000005029	trnau1apa	92	80.682	ENSPKIG00000022205	-	94	80.682	Paramormyrops_kingsleyae
ENSSPAG00000005029	trnau1apa	94	58.163	ENSPSIG00000006864	TRNAU1AP	99	58.163	Pelodiscus_sinensis
ENSSPAG00000005029	trnau1apa	99	70.261	ENSPMGG00000023893	trnau1apa	98	68.506	Periophthalmus_magnuspinnatus
ENSSPAG00000005029	trnau1apa	98	57.655	ENSPEMG00000007877	Trnau1ap	98	58.361	Peromyscus_maniculatus_bairdii
ENSSPAG00000005029	trnau1apa	74	53.509	ENSPMAG00000005934	trnau1apa	96	52.193	Petromyzon_marinus
ENSSPAG00000005029	trnau1apa	55	54.335	ENSPMAG00000000592	trnau1apa	95	54.335	Petromyzon_marinus
ENSSPAG00000005029	trnau1apa	99	83.007	ENSPFOG00000008100	trnau1apa	99	83.660	Poecilia_formosa
ENSSPAG00000005029	trnau1apa	95	82.313	ENSPLAG00000010236	trnau1apa	99	82.993	Poecilia_latipinna
ENSSPAG00000005029	trnau1apa	99	80.984	ENSPMEG00000016387	trnau1apa	97	81.639	Poecilia_mexicana
ENSSPAG00000005029	trnau1apa	89	83.158	ENSPREG00000019821	trnau1apa	95	85.556	Poecilia_reticulata
ENSSPAG00000005029	trnau1apa	89	50.181	ENSPPYG00000001639	-	96	51.515	Pongo_abelii
ENSSPAG00000005029	trnau1apa	97	47.667	ENSPCOG00000023470	-	96	50.175	Propithecus_coquereli
ENSSPAG00000005029	trnau1apa	98	57.980	ENSPCOG00000027712	-	98	57.980	Propithecus_coquereli
ENSSPAG00000005029	trnau1apa	98	57.980	ENSPVAG00000017214	TRNAU1AP	98	58.689	Pteropus_vampyrus
ENSSPAG00000005029	trnau1apa	100	86.581	ENSPNYG00000010130	trnau1apa	99	88.077	Pundamilia_nyererei
ENSSPAG00000005029	trnau1apa	99	52.443	ENSPNAG00000024905	trnau1apa	97	52.117	Pygocentrus_nattereri
ENSSPAG00000005029	trnau1apa	92	55.245	ENSRNOG00000055344	Trnau1ap	92	55.245	Rattus_norvegicus
ENSSPAG00000005029	trnau1apa	98	57.980	ENSRBIG00000029083	TRNAU1AP	98	58.689	Rhinopithecus_bieti
ENSSPAG00000005029	trnau1apa	98	57.980	ENSRROG00000029128	TRNAU1AP	98	58.689	Rhinopithecus_roxellana
ENSSPAG00000005029	trnau1apa	98	57.980	ENSSBOG00000021299	TRNAU1AP	98	58.689	Saimiri_boliviensis_boliviensis
ENSSPAG00000005029	trnau1apa	98	57.655	ENSSHAG00000008108	TRNAU1AP	98	57.655	Sarcophilus_harrisii
ENSSPAG00000005029	trnau1apa	100	84.566	ENSSMAG00000020851	trnau1apa	100	86.495	Scophthalmus_maximus
ENSSPAG00000005029	trnau1apa	100	91.026	ENSSDUG00000011734	trnau1apa	100	91.026	Seriola_dumerili
ENSSPAG00000005029	trnau1apa	100	74.026	ENSSLDG00000012101	trnau1apa	99	74.026	Seriola_lalandi_dorsalis
ENSSPAG00000005029	trnau1apa	96	58.000	ENSSARG00000007536	TRNAU1AP	99	58.725	Sorex_araneus
ENSSPAG00000005029	trnau1apa	98	55.960	ENSSPUG00000010400	-	99	55.738	Sphenodon_punctatus
ENSSPAG00000005029	trnau1apa	63	51.777	ENSSPUG00000010415	-	99	49.746	Sphenodon_punctatus
ENSSPAG00000005029	trnau1apa	98	57.980	ENSSSCG00000030284	TRNAU1AP	98	58.689	Sus_scrofa
ENSSPAG00000005029	trnau1apa	96	58.725	ENSTGUG00000000735	-	99	58.389	Taeniopygia_guttata
ENSSPAG00000005029	trnau1apa	69	42.466	ENSTGUG00000005908	-	99	42.922	Taeniopygia_guttata
ENSSPAG00000005029	trnau1apa	100	85.761	ENSTRUG00000003352	trnau1apa	100	83.819	Takifugu_rubripes
ENSSPAG00000005029	trnau1apa	100	79.100	ENSTNIG00000006129	trnau1apa	100	79.100	Tetraodon_nigroviridis
ENSSPAG00000005029	trnau1apa	84	51.341	ENSTBEG00000008049	-	95	53.629	Tupaia_belangeri
ENSSPAG00000005029	trnau1apa	98	57.980	ENSTTRG00000001854	TRNAU1AP	98	57.980	Tursiops_truncatus
ENSSPAG00000005029	trnau1apa	94	57.770	ENSUAMG00000008789	TRNAU1AP	99	58.503	Ursus_americanus
ENSSPAG00000005029	trnau1apa	98	57.980	ENSUMAG00000011068	TRNAU1AP	98	58.689	Ursus_maritimus
ENSSPAG00000005029	trnau1apa	98	50.784	ENSVPAG00000006778	TRNAU1AP	99	50.784	Vicugna_pacos
ENSSPAG00000005029	trnau1apa	97	57.377	ENSVVUG00000012518	TRNAU1AP	89	58.703	Vulpes_vulpes
ENSSPAG00000005029	trnau1apa	99	83.987	ENSXMAG00000017361	trnau1apa	99	84.641	Xiphophorus_maculatus