EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000005188 (Gene tree)
Gene ID: 103356138
Gene Symbol: lrrc47
Alias: fe50f06|si:ch211-147a11.7|wu:fe50f06
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 9136 bases
Position: chrKK580256.1:265592-274727
Accession: 103356138
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000006731	B3_4	PF03483.17	3.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000006869	-	5561	XM_008280202	ENSSPAP00000006731	559 (aa)	XP_008278424	UPI000497EFBF

Gene Model

Click here to download ENSSPAG00000005188's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000005188's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000005188	lrrc47	99	55.806	ENSG00000130764	LRRC47	99	55.806	Homo_sapiens
ENSSPAG00000005188	lrrc47	100	93.560	ENSAPOG00000019553	lrrc47	100	93.560	Acanthochromis_polyacanthus
ENSSPAG00000005188	lrrc47	81	56.897	ENSAMEG00000009152	LRRC47	99	56.494	Ailuropoda_melanoleuca
ENSSPAG00000005188	lrrc47	67	64.752	ENSAPLG00000003167	LRRC47	99	65.013	Anas_platyrhynchos
ENSSPAG00000005188	lrrc47	66	60.209	ENSACAG00000008267	LRRC47	100	59.845	Anolis_carolinensis
ENSSPAG00000005188	lrrc47	99	54.939	ENSANAG00000025576	LRRC47	99	54.939	Aotus_nancymaae
ENSSPAG00000005188	lrrc47	99	54.593	ENSBTAG00000004738	LRRC47	99	54.671	Bos_taurus
ENSSPAG00000005188	lrrc47	99	55.304	ENSCAFG00000019492	LRRC47	97	54.957	Canis_familiaris
ENSSPAG00000005188	lrrc47	99	55.497	ENSCAFG00020009667	LRRC47	99	55.148	Canis_lupus_dingo
ENSSPAG00000005188	lrrc47	99	55.323	ENSCHIG00000022607	LRRC47	98	55.304	Capra_hircus
ENSSPAG00000005188	lrrc47	96	55.676	ENSTSYG00000009326	LRRC47	97	55.732	Carlito_syrichta
ENSSPAG00000005188	lrrc47	66	60.372	ENSCAPG00000016517	LRRC47	99	59.682	Cavia_aperea
ENSSPAG00000005188	lrrc47	99	54.766	ENSCPOG00000014931	LRRC47	95	54.419	Cavia_porcellus
ENSSPAG00000005188	lrrc47	99	54.766	ENSCCAG00000024895	LRRC47	99	54.939	Cebus_capucinus
ENSSPAG00000005188	lrrc47	99	55.709	ENSCATG00000029337	LRRC47	99	55.633	Cercocebus_atys
ENSSPAG00000005188	lrrc47	99	55.401	ENSCLAG00000006093	LRRC47	99	55.401	Chinchilla_lanigera
ENSSPAG00000005188	lrrc47	99	56.055	ENSCSAG00000000727	LRRC47	99	55.979	Chlorocebus_sabaeus
ENSSPAG00000005188	lrrc47	99	51.678	ENSCPBG00000019404	LRRC47	98	51.678	Chrysemys_picta_bellii
ENSSPAG00000005188	lrrc47	79	57.516	ENSCANG00000030701	LRRC47	96	57.642	Colobus_angolensis_palliatus
ENSSPAG00000005188	lrrc47	99	55.401	ENSCGRG00001015159	Lrrc47	90	55.035	Cricetulus_griseus_chok1gshd
ENSSPAG00000005188	lrrc47	66	60.800	ENSCGRG00000017336	Lrrc47	99	60.372	Cricetulus_griseus_crigri
ENSSPAG00000005188	lrrc47	100	79.249	ENSCSEG00000006217	lrrc47	96	79.249	Cynoglossus_semilaevis
ENSSPAG00000005188	lrrc47	66	61.538	ENSDORG00000016594	Lrrc47	99	61.008	Dipodomys_ordii
ENSSPAG00000005188	lrrc47	99	55.709	ENSEASG00005021788	LRRC47	99	55.363	Equus_asinus_asinus
ENSSPAG00000005188	lrrc47	99	55.882	ENSECAG00000022472	LRRC47	90	55.536	Equus_caballus
ENSSPAG00000005188	lrrc47	100	71.076	ENSELUG00000017544	lrrc47	98	70.899	Esox_lucius
ENSSPAG00000005188	lrrc47	94	54.197	ENSFCAG00000011632	LRRC47	96	53.650	Felis_catus
ENSSPAG00000005188	lrrc47	70	64.213	ENSFALG00000009631	LRRC47	98	59.729	Ficedula_albicollis
ENSSPAG00000005188	lrrc47	100	67.668	ENSGMOG00000015674	lrrc47	99	68.206	Gadus_morhua
ENSSPAG00000005188	lrrc47	99	54.561	ENSGALG00000050995	LRRC47	99	53.752	Gallus_gallus
ENSSPAG00000005188	lrrc47	100	80.000	ENSGACG00000005550	lrrc47	99	79.821	Gasterosteus_aculeatus
ENSSPAG00000005188	lrrc47	99	51.701	ENSGAGG00000022584	LRRC47	98	52.721	Gopherus_agassizii
ENSSPAG00000005188	lrrc47	99	55.806	ENSGGOG00000015571	LRRC47	99	55.633	Gorilla_gorilla
ENSSPAG00000005188	lrrc47	99	54.073	ENSHGLG00000018278	LRRC47	95	53.726	Heterocephalus_glaber_female
ENSSPAG00000005188	lrrc47	70	59.057	ENSHGLG00100008507	LRRC47	99	58.561	Heterocephalus_glaber_male
ENSSPAG00000005188	lrrc47	100	79.249	ENSHCOG00000006348	lrrc47	98	79.606	Hippocampus_comes
ENSSPAG00000005188	lrrc47	99	56.379	ENSSTOG00000027559	LRRC47	99	56.499	Ictidomys_tridecemlineatus
ENSSPAG00000005188	lrrc47	99	55.826	ENSJJAG00000017474	Lrrc47	96	55.633	Jaculus_jaculus
ENSSPAG00000005188	lrrc47	100	84.436	ENSKMAG00000003414	lrrc47	100	84.436	Kryptolebias_marmoratus
ENSSPAG00000005188	lrrc47	99	55.498	ENSLAFG00000011657	LRRC47	99	55.498	Loxodonta_africana
ENSSPAG00000005188	lrrc47	72	59.914	ENSMFAG00000045730	LRRC47	88	57.806	Macaca_fascicularis
ENSSPAG00000005188	lrrc47	99	55.196	ENSMNEG00000042488	LRRC47	99	55.979	Macaca_nemestrina
ENSSPAG00000005188	lrrc47	77	57.366	ENSMLEG00000043735	LRRC47	90	57.494	Mandrillus_leucophaeus
ENSSPAG00000005188	lrrc47	99	55.594	ENSMAUG00000021337	Lrrc47	97	55.420	Mesocricetus_auratus
ENSSPAG00000005188	lrrc47	99	55.806	ENSMICG00000026816	LRRC47	99	56.089	Microcebus_murinus
ENSSPAG00000005188	lrrc47	99	55.712	ENSMOCG00000021279	Lrrc47	99	55.536	Microtus_ochrogaster
ENSSPAG00000005188	lrrc47	100	81.574	ENSMMOG00000017007	lrrc47	100	81.574	Mola_mola
ENSSPAG00000005188	lrrc47	99	43.367	ENSMODG00000006554	LRRC47	98	52.414	Monodelphis_domestica
ENSSPAG00000005188	lrrc47	99	56.076	MGP_CAROLIEiJ_G0026864	Lrrc47	99	55.536	Mus_caroli
ENSSPAG00000005188	lrrc47	99	56.424	ENSMUSG00000029028	Lrrc47	99	55.882	Mus_musculus
ENSSPAG00000005188	lrrc47	99	55.401	MGP_PahariEiJ_G0029212	Lrrc47	97	55.810	Mus_pahari
ENSSPAG00000005188	lrrc47	99	56.250	MGP_SPRETEiJ_G0027857	Lrrc47	99	55.709	Mus_spretus
ENSSPAG00000005188	lrrc47	67	60.892	ENSMPUG00000007321	LRRC47	75	60.367	Mustela_putorius_furo
ENSSPAG00000005188	lrrc47	99	54.641	ENSNGAG00000022153	Lrrc47	98	55.035	Nannospalax_galili
ENSSPAG00000005188	lrrc47	99	54.957	ENSNLEG00000008131	LRRC47	99	54.783	Nomascus_leucogenys
ENSSPAG00000005188	lrrc47	84	56.557	ENSODEG00000010882	LRRC47	93	56.557	Octodon_degus
ENSSPAG00000005188	lrrc47	97	82.222	ENSORLG00000002532	lrrc47	100	82.222	Oryzias_latipes
ENSSPAG00000005188	lrrc47	100	82.290	ENSORLG00020019601	lrrc47	100	82.290	Oryzias_latipes_hni
ENSSPAG00000005188	lrrc47	100	82.111	ENSORLG00015014040	lrrc47	100	82.111	Oryzias_latipes_hsok
ENSSPAG00000005188	lrrc47	100	82.290	ENSOMEG00000008989	lrrc47	100	82.290	Oryzias_melastigma
ENSSPAG00000005188	lrrc47	99	55.709	ENSOGAG00000001553	LRRC47	99	54.939	Otolemur_garnettii
ENSSPAG00000005188	lrrc47	99	53.012	ENSOARG00000015290	LRRC47	99	53.002	Ovis_aries
ENSSPAG00000005188	lrrc47	75	59.719	ENSPPAG00000036370	-	99	59.485	Pan_paniscus
ENSSPAG00000005188	lrrc47	99	54.593	ENSPPRG00000005261	LRRC47	98	54.419	Panthera_pardus
ENSSPAG00000005188	lrrc47	99	55.633	ENSPTRG00000000068	LRRC47	99	55.459	Pan_troglodytes
ENSSPAG00000005188	lrrc47	99	55.882	ENSPANG00000012437	LRRC47	99	55.806	Papio_anubis
ENSSPAG00000005188	lrrc47	66	63.130	ENSPSIG00000004196	LRRC47	99	61.358	Pelodiscus_sinensis
ENSSPAG00000005188	lrrc47	66	62.133	ENSPEMG00000021068	Lrrc47	99	60.904	Peromyscus_maniculatus_bairdii
ENSSPAG00000005188	lrrc47	99	56.021	ENSPCIG00000003638	LRRC47	98	56.174	Phascolarctos_cinereus
ENSSPAG00000005188	lrrc47	94	81.250	ENSPFOG00000000992	lrrc47	94	79.735	Poecilia_formosa
ENSSPAG00000005188	lrrc47	100	81.574	ENSPLAG00000008077	lrrc47	100	80.143	Poecilia_latipinna
ENSSPAG00000005188	lrrc47	100	81.038	ENSPMEG00000007367	lrrc47	100	79.964	Poecilia_mexicana
ENSSPAG00000005188	lrrc47	99	55.633	ENSPPYG00000001960	LRRC47	99	55.459	Pongo_abelii
ENSSPAG00000005188	lrrc47	99	53.367	ENSPCOG00000019161	LRRC47	99	55.403	Propithecus_coquereli
ENSSPAG00000005188	lrrc47	99	55.226	ENSPVAG00000009839	LRRC47	99	55.148	Pteropus_vampyrus
ENSSPAG00000005188	lrrc47	99	66.308	ENSPNAG00000017982	lrrc47	98	66.427	Pygocentrus_nattereri
ENSSPAG00000005188	lrrc47	99	55.017	ENSRNOG00000024796	Lrrc47	99	55.017	Rattus_norvegicus
ENSSPAG00000005188	lrrc47	99	55.882	ENSRBIG00000019437	LRRC47	99	55.806	Rhinopithecus_bieti
ENSSPAG00000005188	lrrc47	99	55.882	ENSRROG00000043182	LRRC47	99	55.806	Rhinopithecus_roxellana
ENSSPAG00000005188	lrrc47	80	57.768	ENSSBOG00000026334	LRRC47	92	58.186	Saimiri_boliviensis_boliviensis
ENSSPAG00000005188	lrrc47	99	49.654	ENSSHAG00000007360	LRRC47	98	50.000	Sarcophilus_harrisii
ENSSPAG00000005188	lrrc47	100	85.893	ENSSMAG00000009344	lrrc47	100	85.893	Scophthalmus_maximus
ENSSPAG00000005188	lrrc47	100	87.120	ENSSDUG00000014618	lrrc47	100	87.120	Seriola_dumerili
ENSSPAG00000005188	lrrc47	100	86.941	ENSSLDG00000018908	lrrc47	100	86.941	Seriola_lalandi_dorsalis
ENSSPAG00000005188	lrrc47	99	54.561	ENSSPUG00000010277	LRRC47	98	55.250	Sphenodon_punctatus
ENSSPAG00000005188	lrrc47	99	55.709	ENSSSCG00000039516	LRRC47	99	55.882	Sus_scrofa
ENSSPAG00000005188	lrrc47	71	63.384	ENSTGUG00000002737	LRRC47	98	62.626	Taeniopygia_guttata
ENSSPAG00000005188	lrrc47	100	78.175	ENSTRUG00000017696	lrrc47	100	78.533	Takifugu_rubripes
ENSSPAG00000005188	lrrc47	100	77.639	ENSTNIG00000010923	lrrc47	99	78.712	Tetraodon_nigroviridis
ENSSPAG00000005188	lrrc47	99	54.152	ENSTTRG00000011751	LRRC47	99	54.325	Tursiops_truncatus
ENSSPAG00000005188	lrrc47	89	56.069	ENSUAMG00000012080	LRRC47	98	55.048	Ursus_americanus
ENSSPAG00000005188	lrrc47	66	61.376	ENSUMAG00000010781	LRRC47	80	59.896	Ursus_maritimus
ENSSPAG00000005188	lrrc47	99	51.562	ENSVVUG00000027118	LRRC47	98	51.042	Vulpes_vulpes
ENSSPAG00000005188	lrrc47	99	58.467	ENSXETG00000006029	lrrc47	98	58.897	Xenopus_tropicalis
ENSSPAG00000005188	lrrc47	99	80.396	ENSXCOG00000002813	lrrc47	98	80.651	Xiphophorus_couchianus
ENSSPAG00000005188	lrrc47	99	79.137	ENSXMAG00000019386	lrrc47	100	79.137	Xiphophorus_maculatus