EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000005349 (Gene tree)
Gene ID: 103372875
Gene Symbol: cpsf1
Alias: wu:fb24c01
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 17435 bases
Position: chrKK581920.1:83380-100814
Accession: 103372875
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000007010	CPSF_A	PF03178.15	5.5e-92	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000007149	-	5367	XM_008302643	ENSSPAP00000007010	1471 (aa)	XP_008300865	UPI000495648E

Gene Model

Click here to download ENSSPAG00000005349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000005349's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000005349	cpsf1	100	78.093	ENSG00000071894	CPSF1	100	80.093	Homo_sapiens
ENSSPAG00000005349	cpsf1	100	97.418	ENSAPOG00000019621	cpsf1	100	97.418	Acanthochromis_polyacanthus
ENSSPAG00000005349	cpsf1	97	76.864	ENSAMEG00000005557	CPSF1	99	76.446	Ailuropoda_melanoleuca
ENSSPAG00000005349	cpsf1	100	90.244	ENSACIG00000006112	cpsf1	100	90.583	Amphilophus_citrinellus
ENSSPAG00000005349	cpsf1	100	93.311	ENSAOCG00000007120	cpsf1	100	93.311	Amphiprion_ocellaris
ENSSPAG00000005349	cpsf1	100	94.595	ENSAPEG00000005755	cpsf1	100	94.595	Amphiprion_percula
ENSSPAG00000005349	cpsf1	100	94.437	ENSATEG00000011097	cpsf1	100	95.387	Anabas_testudineus
ENSSPAG00000005349	cpsf1	93	74.165	ENSACAG00000009655	CPSF1	100	73.803	Anolis_carolinensis
ENSSPAG00000005349	cpsf1	100	78.026	ENSANAG00000036514	CPSF1	100	78.161	Aotus_nancymaae
ENSSPAG00000005349	cpsf1	99	94.517	ENSACLG00000012231	cpsf1	99	94.072	Astatotilapia_calliptera
ENSSPAG00000005349	cpsf1	100	79.257	ENSAMXG00000008485	cpsf1	100	78.986	Astyanax_mexicanus
ENSSPAG00000005349	cpsf1	100	77.025	ENSBTAG00000008355	CPSF1	100	77.544	Bos_taurus
ENSSPAG00000005349	cpsf1	100	32.237	WBGene00022301	cpsf-1	99	41.243	Caenorhabditis_elegans
ENSSPAG00000005349	cpsf1	100	78.296	ENSCJAG00000021421	CPSF1	100	78.161	Callithrix_jacchus
ENSSPAG00000005349	cpsf1	97	78.671	ENSCAFG00000001600	CPSF1	100	77.710	Canis_familiaris
ENSSPAG00000005349	cpsf1	100	78.190	ENSCAFG00020020821	CPSF1	100	77.920	Canis_lupus_dingo
ENSSPAG00000005349	cpsf1	100	74.442	ENSCHIG00000015833	CPSF1	100	74.104	Capra_hircus
ENSSPAG00000005349	cpsf1	100	78.634	ENSTSYG00000028560	CPSF1	100	81.019	Carlito_syrichta
ENSSPAG00000005349	cpsf1	97	77.654	ENSCAPG00000014921	CPSF1	99	77.514	Cavia_aperea
ENSSPAG00000005349	cpsf1	100	77.079	ENSCPOG00000011448	CPSF1	100	76.944	Cavia_porcellus
ENSSPAG00000005349	cpsf1	100	78.581	ENSCCAG00000037658	CPSF1	100	80.275	Cebus_capucinus
ENSSPAG00000005349	cpsf1	100	78.026	ENSCATG00000037234	CPSF1	100	80.093	Cercocebus_atys
ENSSPAG00000005349	cpsf1	100	78.349	ENSCLAG00000012166	CPSF1	100	78.214	Chinchilla_lanigera
ENSSPAG00000005349	cpsf1	100	78.431	ENSCSAG00000008502	CPSF1	100	78.093	Chlorocebus_sabaeus
ENSSPAG00000005349	cpsf1	99	80.328	ENSCPBG00000018910	CPSF1	96	79.986	Chrysemys_picta_bellii
ENSSPAG00000005349	cpsf1	96	47.893	ENSCING00000000514	-	100	47.823	Ciona_intestinalis
ENSSPAG00000005349	cpsf1	99	48.213	ENSCSAVG00000002293	-	99	51.163	Ciona_savignyi
ENSSPAG00000005349	cpsf1	98	75.536	ENSCANG00000032760	CPSF1	100	80.556	Colobus_angolensis_palliatus
ENSSPAG00000005349	cpsf1	100	78.078	ENSCGRG00001016344	Cpsf1	100	77.876	Cricetulus_griseus_chok1gshd
ENSSPAG00000005349	cpsf1	100	76.522	ENSCGRG00000003118	Cpsf1	100	76.319	Cricetulus_griseus_crigri
ENSSPAG00000005349	cpsf1	100	87.127	ENSCSEG00000013464	cpsf1	99	89.635	Cynoglossus_semilaevis
ENSSPAG00000005349	cpsf1	86	87.047	ENSCVAG00000014059	cpsf1	100	81.944	Cyprinodon_variegatus
ENSSPAG00000005349	cpsf1	100	86.883	ENSDARG00000034178	cpsf1	100	86.815	Danio_rerio
ENSSPAG00000005349	cpsf1	57	81.503	ENSDNOG00000043654	CPSF1	94	81.503	Dasypus_novemcinctus
ENSSPAG00000005349	cpsf1	97	78.011	ENSDORG00000006278	Cpsf1	99	78.011	Dipodomys_ordii
ENSSPAG00000005349	cpsf1	100	43.984	FBgn0024698	Cpsf160	100	43.664	Drosophila_melanogaster
ENSSPAG00000005349	cpsf1	81	85.906	ENSETEG00000006022	CPSF1	83	85.906	Echinops_telfairi
ENSSPAG00000005349	cpsf1	100	78.190	ENSEASG00005010774	CPSF1	100	78.055	Equus_asinus_asinus
ENSSPAG00000005349	cpsf1	100	78.055	ENSECAG00000022209	CPSF1	100	77.920	Equus_caballus
ENSSPAG00000005349	cpsf1	100	77.868	ENSEEUG00000000471	CPSF1	100	77.868	Erinaceus_europaeus
ENSSPAG00000005349	cpsf1	100	87.088	ENSELUG00000012271	cpsf1	100	86.870	Esox_lucius
ENSSPAG00000005349	cpsf1	100	78.620	ENSFDAG00000016060	CPSF1	100	78.484	Fukomys_damarensis
ENSSPAG00000005349	cpsf1	100	87.779	ENSFHEG00000016801	cpsf1	100	87.441	Fundulus_heteroclitus
ENSSPAG00000005349	cpsf1	100	86.486	ENSGMOG00000000796	cpsf1	100	86.351	Gadus_morhua
ENSSPAG00000005349	cpsf1	96	91.071	ENSGAFG00000018890	cpsf1	100	91.071	Gambusia_affinis
ENSSPAG00000005349	cpsf1	100	90.296	ENSGACG00000008703	cpsf1	100	90.094	Gasterosteus_aculeatus
ENSSPAG00000005349	cpsf1	100	77.395	ENSGAGG00000004276	CPSF1	98	80.603	Gopherus_agassizii
ENSSPAG00000005349	cpsf1	100	78.146	ENSGGOG00000016185	CPSF1	100	80.093	Gorilla_gorilla
ENSSPAG00000005349	cpsf1	100	92.454	ENSHBUG00000018900	cpsf1	100	92.454	Haplochromis_burtoni
ENSSPAG00000005349	cpsf1	100	78.417	ENSHGLG00000016139	CPSF1	100	78.281	Heterocephalus_glaber_female
ENSSPAG00000005349	cpsf1	100	78.349	ENSHGLG00100009750	CPSF1	100	78.214	Heterocephalus_glaber_male
ENSSPAG00000005349	cpsf1	100	89.470	ENSHCOG00000018509	cpsf1	100	89.402	Hippocampus_comes
ENSSPAG00000005349	cpsf1	100	83.649	ENSIPUG00000011259	cpsf1	100	83.187	Ictalurus_punctatus
ENSSPAG00000005349	cpsf1	97	78.079	ENSSTOG00000009957	CPSF1	99	77.940	Ictidomys_tridecemlineatus
ENSSPAG00000005349	cpsf1	100	78.214	ENSJJAG00000023002	Cpsf1	100	78.011	Jaculus_jaculus
ENSSPAG00000005349	cpsf1	91	93.730	ENSKMAG00000001940	cpsf1	99	93.730	Kryptolebias_marmoratus
ENSSPAG00000005349	cpsf1	100	92.522	ENSLBEG00000003601	cpsf1	100	92.658	Labrus_bergylta
ENSSPAG00000005349	cpsf1	87	79.306	ENSLACG00000000233	CPSF1	92	79.187	Latimeria_chalumnae
ENSSPAG00000005349	cpsf1	100	81.714	ENSLOCG00000008484	cpsf1	100	81.984	Lepisosteus_oculatus
ENSSPAG00000005349	cpsf1	97	78.312	ENSLAFG00000022601	CPSF1	100	78.033	Loxodonta_africana
ENSSPAG00000005349	cpsf1	100	78.026	ENSMFAG00000037013	CPSF1	100	80.093	Macaca_fascicularis
ENSSPAG00000005349	cpsf1	100	78.026	ENSMMUG00000007380	CPSF1	100	80.093	Macaca_mulatta
ENSSPAG00000005349	cpsf1	97	78.407	ENSMNEG00000043564	CPSF1	100	80.093	Macaca_nemestrina
ENSSPAG00000005349	cpsf1	100	78.026	ENSMLEG00000043010	CPSF1	100	80.093	Mandrillus_leucophaeus
ENSSPAG00000005349	cpsf1	100	95.312	ENSMAMG00000003803	cpsf1	100	95.448	Mastacembelus_armatus
ENSSPAG00000005349	cpsf1	100	88.919	ENSMZEG00005001168	cpsf1	100	88.919	Maylandia_zebra
ENSSPAG00000005349	cpsf1	100	78.078	ENSMAUG00000003601	Cpsf1	100	77.943	Mesocricetus_auratus
ENSSPAG00000005349	cpsf1	100	78.214	ENSMICG00000015767	CPSF1	100	77.876	Microcebus_murinus
ENSSPAG00000005349	cpsf1	100	77.808	ENSMOCG00000022758	Cpsf1	100	77.605	Microtus_ochrogaster
ENSSPAG00000005349	cpsf1	100	90.798	ENSMMOG00000021245	cpsf1	100	90.798	Mola_mola
ENSSPAG00000005349	cpsf1	100	78.731	ENSMODG00000010755	CPSF1	100	78.596	Monodelphis_domestica
ENSSPAG00000005349	cpsf1	100	93.886	ENSMALG00000020545	cpsf1	100	93.954	Monopterus_albus
ENSSPAG00000005349	cpsf1	100	78.349	MGP_CAROLIEiJ_G0019936	Cpsf1	100	78.146	Mus_caroli
ENSSPAG00000005349	cpsf1	100	78.417	ENSMUSG00000034022	Cpsf1	100	78.214	Mus_musculus
ENSSPAG00000005349	cpsf1	100	78.349	MGP_PahariEiJ_G0019946	Cpsf1	100	78.146	Mus_pahari
ENSSPAG00000005349	cpsf1	100	78.417	MGP_SPRETEiJ_G0020839	Cpsf1	100	78.214	Mus_spretus
ENSSPAG00000005349	cpsf1	94	78.644	ENSMPUG00000006419	CPSF1	93	78.283	Mustela_putorius_furo
ENSSPAG00000005349	cpsf1	100	78.281	ENSNGAG00000022460	Cpsf1	100	77.943	Nannospalax_galili
ENSSPAG00000005349	cpsf1	100	86.005	ENSNBRG00000000813	cpsf1	97	91.085	Neolamprologus_brichardi
ENSSPAG00000005349	cpsf1	86	69.820	ENSNLEG00000010633	-	100	80.093	Nomascus_leucogenys
ENSSPAG00000005349	cpsf1	83	87.209	ENSMEUG00000014922	CPSF1	85	87.209	Notamacropus_eugenii
ENSSPAG00000005349	cpsf1	61	88.421	ENSOPRG00000004693	-	70	88.421	Ochotona_princeps
ENSSPAG00000005349	cpsf1	100	78.417	ENSODEG00000013995	CPSF1	100	78.281	Octodon_degus
ENSSPAG00000005349	cpsf1	100	92.760	ENSONIG00000007676	cpsf1	100	92.422	Oreochromis_niloticus
ENSSPAG00000005349	cpsf1	59	78.571	ENSOANG00000010716	CPSF1	89	78.571	Ornithorhynchus_anatinus
ENSSPAG00000005349	cpsf1	100	90.625	ENSORLG00000013544	cpsf1	100	90.149	Oryzias_latipes
ENSSPAG00000005349	cpsf1	100	90.625	ENSORLG00020021693	cpsf1	100	90.149	Oryzias_latipes_hni
ENSSPAG00000005349	cpsf1	100	90.625	ENSORLG00015009979	cpsf1	100	90.149	Oryzias_latipes_hsok
ENSSPAG00000005349	cpsf1	100	90.903	ENSOMEG00000011849	cpsf1	100	90.428	Oryzias_melastigma
ENSSPAG00000005349	cpsf1	100	78.364	ENSOGAG00000000315	CPSF1	100	78.161	Otolemur_garnettii
ENSSPAG00000005349	cpsf1	100	78.161	ENSPPAG00000019280	CPSF1	100	81.448	Pan_paniscus
ENSSPAG00000005349	cpsf1	100	76.862	ENSPTRG00000051253	-	100	81.448	Pan_troglodytes
ENSSPAG00000005349	cpsf1	100	78.161	ENSPTRG00000049288	-	100	81.448	Pan_troglodytes
ENSSPAG00000005349	cpsf1	97	78.407	ENSPANG00000015005	CPSF1	100	80.093	Papio_anubis
ENSSPAG00000005349	cpsf1	100	86.275	ENSPKIG00000002582	cpsf1	100	86.361	Paramormyrops_kingsleyae
ENSSPAG00000005349	cpsf1	100	78.866	ENSPCIG00000009035	CPSF1	100	78.731	Phascolarctos_cinereus
ENSSPAG00000005349	cpsf1	100	90.891	ENSPFOG00000012870	cpsf1	100	90.687	Poecilia_formosa
ENSSPAG00000005349	cpsf1	100	91.094	ENSPREG00000016307	cpsf1	100	91.094	Poecilia_reticulata
ENSSPAG00000005349	cpsf1	100	71.216	ENSPPYG00000018973	CPSF1	100	71.081	Pongo_abelii
ENSSPAG00000005349	cpsf1	91	84.943	ENSPCAG00000011541	CPSF1	94	84.943	Procavia_capensis
ENSSPAG00000005349	cpsf1	100	74.848	ENSPCOG00000020001	CPSF1	100	80.093	Propithecus_coquereli
ENSSPAG00000005349	cpsf1	91	88.000	ENSPVAG00000006761	CPSF1	91	88.000	Pteropus_vampyrus
ENSSPAG00000005349	cpsf1	100	94.705	ENSPNYG00000004906	cpsf1	100	94.365	Pundamilia_nyererei
ENSSPAG00000005349	cpsf1	100	82.090	ENSPNAG00000024395	cpsf1	100	81.886	Pygocentrus_nattereri
ENSSPAG00000005349	cpsf1	100	78.252	ENSRNOG00000030705	Cpsf1	100	78.049	Rattus_norvegicus
ENSSPAG00000005349	cpsf1	100	78.093	ENSRBIG00000044907	CPSF1	100	80.556	Rhinopithecus_bieti
ENSSPAG00000005349	cpsf1	100	78.161	ENSRROG00000044861	CPSF1	100	80.556	Rhinopithecus_roxellana
ENSSPAG00000005349	cpsf1	97	78.477	ENSSBOG00000027177	CPSF1	99	78.376	Saimiri_boliviensis_boliviensis
ENSSPAG00000005349	cpsf1	100	78.663	ENSSHAG00000006500	CPSF1	100	78.596	Sarcophilus_harrisii
ENSSPAG00000005349	cpsf1	100	84.595	ENSSFOG00015004606	cpsf1	100	87.117	Scleropages_formosus
ENSSPAG00000005349	cpsf1	100	93.954	ENSSMAG00000020547	cpsf1	100	93.886	Scophthalmus_maximus
ENSSPAG00000005349	cpsf1	100	92.188	ENSSDUG00000001100	cpsf1	100	92.255	Seriola_dumerili
ENSSPAG00000005349	cpsf1	100	92.188	ENSSLDG00000003619	cpsf1	100	92.052	Seriola_lalandi_dorsalis
ENSSPAG00000005349	cpsf1	89	75.118	ENSSARG00000003643	CPSF1	92	74.725	Sorex_araneus
ENSSPAG00000005349	cpsf1	96	81.250	ENSSPUG00000014396	CPSF1	99	81.083	Sphenodon_punctatus
ENSSPAG00000005349	cpsf1	100	77.245	ENSSSCG00000005906	CPSF1	100	77.043	Sus_scrofa
ENSSPAG00000005349	cpsf1	96	91.338	ENSTRUG00000013134	cpsf1	99	91.268	Takifugu_rubripes
ENSSPAG00000005349	cpsf1	100	89.293	ENSTNIG00000014027	cpsf1	100	89.091	Tetraodon_nigroviridis
ENSSPAG00000005349	cpsf1	78	70.962	ENSTBEG00000001756	CPSF1	91	70.799	Tupaia_belangeri
ENSSPAG00000005349	cpsf1	90	83.621	ENSTTRG00000001937	CPSF1	90	83.621	Tursiops_truncatus
ENSSPAG00000005349	cpsf1	97	78.522	ENSUAMG00000006476	CPSF1	98	78.103	Ursus_americanus
ENSSPAG00000005349	cpsf1	100	88.375	ENSXCOG00000003608	cpsf1	100	88.103	Xiphophorus_couchianus
ENSSPAG00000005349	cpsf1	100	87.432	ENSXMAG00000005798	cpsf1	100	87.500	Xiphophorus_maculatus