EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000005370 (Gene tree)
Gene ID: 103355586
Gene Symbol: -
Alias: -
Full Name: ribosomal RNA processing 1
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 26161 bases
Position: chrKK580230.1:129074-155234
Accession: 103355586
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000006973	Nop52	PF05997.12	1.6e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000007114	-	5738	XM_008279433	ENSSPAP00000006973	974 (aa)	XP_008277655	UPI000494EAD1

Gene Model

Click here to download ENSSPAG00000005370's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000005370's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000005370	-	52	49.612	ENSG00000160208	RRP1B	64	49.612	Homo_sapiens
ENSSPAG00000005370	-	100	74.723	ENSAPOG00000007490	-	100	74.723	Acanthochromis_polyacanthus
ENSSPAG00000005370	-	50	48.819	ENSAMEG00000011401	RRP1B	64	48.819	Ailuropoda_melanoleuca
ENSSPAG00000005370	-	95	73.645	ENSAOCG00000017894	-	100	89.362	Amphiprion_ocellaris
ENSSPAG00000005370	-	100	74.044	ENSAPEG00000024150	-	100	73.874	Amphiprion_percula
ENSSPAG00000005370	-	100	55.407	ENSATEG00000005045	-	100	53.524	Anabas_testudineus
ENSSPAG00000005370	-	50	47.139	ENSAPLG00000004310	RRP1B	62	47.647	Anas_platyrhynchos
ENSSPAG00000005370	-	54	47.200	ENSACAG00000017851	RRP1B	60	49.479	Anolis_carolinensis
ENSSPAG00000005370	-	52	47.287	ENSANAG00000034889	RRP1B	64	48.062	Aotus_nancymaae
ENSSPAG00000005370	-	51	47.619	ENSBTAG00000017418	RRP1B	64	47.619	Bos_taurus
ENSSPAG00000005370	-	52	45.312	ENSCJAG00000017077	RRP1B	64	47.656	Callithrix_jacchus
ENSSPAG00000005370	-	52	48.819	ENSCAFG00020018901	RRP1B	67	48.819	Canis_lupus_dingo
ENSSPAG00000005370	-	51	50.000	ENSCHIG00000021519	RRP1B	64	50.000	Capra_hircus
ENSSPAG00000005370	-	51	46.457	ENSCPOG00000002396	RRP1B	66	46.457	Cavia_porcellus
ENSSPAG00000005370	-	52	49.219	ENSCCAG00000029384	RRP1B	64	49.219	Cebus_capucinus
ENSSPAG00000005370	-	52	48.031	ENSCATG00000017423	RRP1B	64	48.031	Cercocebus_atys
ENSSPAG00000005370	-	52	50.394	ENSCSAG00000007961	RRP1B	64	50.394	Chlorocebus_sabaeus
ENSSPAG00000005370	-	52	50.667	ENSCPBG00000010310	RRP1B	61	50.262	Chrysemys_picta_bellii
ENSSPAG00000005370	-	52	49.219	ENSCANG00000040952	RRP1B	64	49.219	Colobus_angolensis_palliatus
ENSSPAG00000005370	-	51	49.219	ENSCGRG00001023882	-	60	58.824	Cricetulus_griseus_chok1gshd
ENSSPAG00000005370	-	51	49.219	ENSCGRG00001010889	-	64	49.219	Cricetulus_griseus_chok1gshd
ENSSPAG00000005370	-	66	67.708	ENSCSEG00000020711	-	81	67.708	Cynoglossus_semilaevis
ENSSPAG00000005370	-	55	52.778	ENSDARG00000103337	rrp1	66	51.989	Danio_rerio
ENSSPAG00000005370	-	52	48.062	ENSDNOG00000032774	RRP1B	64	48.062	Dasypus_novemcinctus
ENSSPAG00000005370	-	52	47.656	ENSEASG00005001687	RRP1B	64	47.656	Equus_asinus_asinus
ENSSPAG00000005370	-	52	47.656	ENSECAG00000018018	RRP1B	64	47.656	Equus_caballus
ENSSPAG00000005370	-	52	46.875	ENSFCAG00000010272	RRP1B	66	46.565	Felis_catus
ENSSPAG00000005370	-	52	44.918	ENSFALG00000002024	RRP1B	64	44.548	Ficedula_albicollis
ENSSPAG00000005370	-	97	50.675	ENSFHEG00000016314	-	98	49.424	Fundulus_heteroclitus
ENSSPAG00000005370	-	59	61.680	ENSGMOG00000001953	-	69	60.000	Gadus_morhua
ENSSPAG00000005370	-	57	46.898	ENSGALG00000035696	RRP1B	68	54.000	Gallus_gallus
ENSSPAG00000005370	-	62	67.971	ENSGACG00000001438	rrp1	78	68.557	Gasterosteus_aculeatus
ENSSPAG00000005370	-	58	50.398	ENSGAGG00000000375	RRP1B	63	49.606	Gopherus_agassizii
ENSSPAG00000005370	-	52	49.612	ENSGGOG00000012069	RRP1B	64	49.612	Gorilla_gorilla
ENSSPAG00000005370	-	52	67.684	ENSHBUG00000003766	-	59	66.580	Haplochromis_burtoni
ENSSPAG00000005370	-	52	47.619	ENSHGLG00000004968	RRP1B	65	47.619	Heterocephalus_glaber_female
ENSSPAG00000005370	-	84	52.913	ENSHCOG00000018388	-	64	59.122	Hippocampus_comes
ENSSPAG00000005370	-	50	47.656	ENSSTOG00000011790	RRP1B	64	47.656	Ictidomys_tridecemlineatus
ENSSPAG00000005370	-	65	68.765	ENSKMAG00000005539	rrp1	83	67.517	Kryptolebias_marmoratus
ENSSPAG00000005370	-	55	48.551	ENSLACG00000017332	-	65	47.815	Latimeria_chalumnae
ENSSPAG00000005370	-	55	55.039	ENSLOCG00000004064	-	71	53.728	Lepisosteus_oculatus
ENSSPAG00000005370	-	52	48.438	ENSMFAG00000039152	RRP1B	64	48.438	Macaca_fascicularis
ENSSPAG00000005370	-	53	45.692	ENSMMUG00000000104	RRP1B	67	44.041	Macaca_mulatta
ENSSPAG00000005370	-	52	48.062	ENSMNEG00000034269	RRP1B	64	48.062	Macaca_nemestrina
ENSSPAG00000005370	-	51	53.000	ENSMGAG00000014591	RRP1B	60	53.000	Meleagris_gallopavo
ENSSPAG00000005370	-	52	51.163	ENSMICG00000004686	RRP1B	66	51.163	Microcebus_murinus
ENSSPAG00000005370	-	50	50.000	ENSMOCG00000001117	Rrp1b	63	50.000	Microtus_ochrogaster
ENSSPAG00000005370	-	51	46.684	ENSMODG00000021033	RRP1B	64	50.000	Monodelphis_domestica
ENSSPAG00000005370	-	51	48.438	MGP_CAROLIEiJ_G0021376	Rrp1b	58	55.882	Mus_caroli
ENSSPAG00000005370	-	51	48.438	MGP_PahariEiJ_G0023695	Rrp1b	58	55.882	Mus_pahari
ENSSPAG00000005370	-	52	45.205	MGP_SPRETEiJ_G0022290	Rrp1b	58	57.353	Mus_spretus
ENSSPAG00000005370	-	52	48.031	ENSMLUG00000007738	RRP1B	64	48.031	Myotis_lucifugus
ENSSPAG00000005370	-	52	49.612	ENSNLEG00000001490	RRP1B	66	49.612	Nomascus_leucogenys
ENSSPAG00000005370	-	50	73.729	ENSONIG00000004264	rrp1	62	73.729	Oreochromis_niloticus
ENSSPAG00000005370	-	52	48.438	ENSOANG00000006470	RRP1B	64	49.612	Ornithorhynchus_anatinus
ENSSPAG00000005370	-	92	62.766	ENSORLG00020007199	-	60	65.263	Oryzias_latipes_hni
ENSSPAG00000005370	-	68	64.548	ENSOMEG00000016910	-	59	68.085	Oryzias_melastigma
ENSSPAG00000005370	-	52	46.875	ENSPPRG00000010356	RRP1B	66	46.565	Panthera_pardus
ENSSPAG00000005370	-	52	48.837	ENSPTRG00000013958	RRP1B	64	48.837	Pan_troglodytes
ENSSPAG00000005370	-	52	48.819	ENSPANG00000011090	RRP1B	64	48.819	Papio_anubis
ENSSPAG00000005370	-	54	59.441	ENSPKIG00000003422	-	61	59.441	Paramormyrops_kingsleyae
ENSSPAG00000005370	-	52	51.187	ENSPSIG00000008152	RRP1B	60	50.656	Pelodiscus_sinensis
ENSSPAG00000005370	-	51	51.969	ENSPEMG00000022490	Rrp1b	65	51.562	Peromyscus_maniculatus_bairdii
ENSSPAG00000005370	-	51	54.945	ENSPCIG00000015513	RRP1B	63	54.945	Phascolarctos_cinereus
ENSSPAG00000005370	-	61	66.832	ENSPFOG00000007424	-	65	68.274	Poecilia_formosa
ENSSPAG00000005370	-	64	65.574	ENSPMEG00000007042	-	64	69.231	Poecilia_mexicana
ENSSPAG00000005370	-	65	66.745	ENSPREG00000015673	-	70	62.472	Poecilia_reticulata
ENSSPAG00000005370	-	52	49.612	ENSPPYG00000011470	RRP1B	64	49.612	Pongo_abelii
ENSSPAG00000005370	-	52	51.163	ENSPCOG00000017927	RRP1B	66	51.163	Propithecus_coquereli
ENSSPAG00000005370	-	52	45.669	ENSPVAG00000001436	RRP1B	50	48.855	Pteropus_vampyrus
ENSSPAG00000005370	-	59	42.588	ENSRNOG00000001194	Rrp1b	65	46.457	Rattus_norvegicus
ENSSPAG00000005370	-	52	50.388	ENSRBIG00000041689	RRP1B	63	50.388	Rhinopithecus_bieti
ENSSPAG00000005370	-	52	50.388	ENSRROG00000031499	RRP1B	64	50.388	Rhinopithecus_roxellana
ENSSPAG00000005370	-	51	48.438	ENSSHAG00000017789	RRP1B	64	48.031	Sarcophilus_harrisii
ENSSPAG00000005370	-	56	59.236	ENSSFOG00015003932	-	71	55.357	Scleropages_formosus
ENSSPAG00000005370	-	100	55.388	ENSSMAG00000016847	-	87	72.846	Scophthalmus_maximus
ENSSPAG00000005370	-	100	58.135	ENSSDUG00000000551	-	100	56.615	Seriola_dumerili
ENSSPAG00000005370	-	100	58.176	ENSSLDG00000002538	-	100	56.780	Seriola_lalandi_dorsalis
ENSSPAG00000005370	-	52	48.611	ENSSPUG00000002834	RRP1B	63	49.275	Sphenodon_punctatus
ENSSPAG00000005370	-	52	50.394	ENSSSCG00000021698	RRP1B	66	56.044	Sus_scrofa
ENSSPAG00000005370	-	51	46.847	ENSTGUG00000005926	RRP1B	68	43.200	Taeniopygia_guttata
ENSSPAG00000005370	-	52	45.052	ENSTTRG00000000723	RRP1B	66	44.531	Tursiops_truncatus
ENSSPAG00000005370	-	52	48.031	ENSUAMG00000026765	RRP1B	71	48.031	Ursus_americanus
ENSSPAG00000005370	-	58	43.235	ENSUMAG00000025510	RRP1B	92	41.916	Ursus_maritimus
ENSSPAG00000005370	-	52	43.229	ENSXETG00000013683	rrp1b	70	45.263	Xenopus_tropicalis
ENSSPAG00000005370	-	65	65.012	ENSXMAG00000023123	-	65	68.205	Xiphophorus_maculatus