EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSPAG00000005435 (Gene tree)
Gene ID
-
Gene Symbol
lsm5
Alias
zgc:171959
Full Name
LSM5 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type
protein_coding
Species
Stegastes_partitus
Status
putative
Strand
Plus strand
Length
2219 bases
Position
chrKK582574.1:10201-12419
Accession
103375215
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSPAP00000007079LSMPF01423.223e-0611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSPAT00000007219-180XM_008305430ENSSPAP0000000707959 (aa)XP_008303652-
Gene Model
Click here to download ENSSPAG00000005435's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000005435's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSPAG00000005435lsm57693.333ENSG00000106355LSM57393.333Homo_sapiens
ENSSPAG00000005435lsm57695.556ENSAPOG00000011743LSM57395.556Acanthochromis_polyacanthus
ENSSPAG00000005435lsm510063.736ENSAPOG00000020779LSM510063.736Acanthochromis_polyacanthus
ENSSPAG00000005435lsm510060.440ENSAMEG00000006700LSM510060.440Ailuropoda_melanoleuca
ENSSPAG00000005435lsm59396.364ENSACIG00000019185lsm59896.364Amphilophus_citrinellus
ENSSPAG00000005435lsm510063.736ENSAOCG00000001636lsm510063.736Amphiprion_ocellaris
ENSSPAG00000005435lsm57695.556ENSAPEG00000008201lsm57395.556Amphiprion_percula
ENSSPAG00000005435lsm510063.736ENSAPEG00000008151lsm510063.736Amphiprion_percula
ENSSPAG00000005435lsm510096.610ENSATEG00000020470lsm510096.610Anabas_testudineus
ENSSPAG00000005435lsm57393.023ENSAPLG00000008171LSM55893.023Anas_platyrhynchos
ENSSPAG00000005435lsm510059.341ENSANAG00000034409-10059.341Aotus_nancymaae
ENSSPAG00000005435lsm59855.556ENSANAG00000024192-9455.556Aotus_nancymaae
ENSSPAG00000005435lsm510060.759ENSANAG00000037758-10060.759Aotus_nancymaae
ENSSPAG00000005435lsm59359.770ENSACLG00000012891lsm59959.770Astatotilapia_calliptera
ENSSPAG00000005435lsm510059.574ENSAMXG00000035543lsm510059.574Astyanax_mexicanus
ENSSPAG00000005435lsm510060.440ENSBTAG00000002332LSM510060.440Bos_taurus
ENSSPAG00000005435lsm510045.055WBGene00003079lsm-510045.055Caenorhabditis_elegans
ENSSPAG00000005435lsm510060.440ENSCJAG00000047379LSM55760.440Callithrix_jacchus
ENSSPAG00000005435lsm59855.556ENSCJAG00000005678-10055.556Callithrix_jacchus
ENSSPAG00000005435lsm510059.341ENSCAFG00000019261-10059.341Canis_familiaris
ENSSPAG00000005435lsm510060.440ENSCAFG00020004946LSM510060.440Canis_lupus_dingo
ENSSPAG00000005435lsm510060.440ENSCHIG00000024539LSM510060.440Capra_hircus
ENSSPAG00000005435lsm510058.242ENSCHIG00000004079-10058.242Capra_hircus
ENSSPAG00000005435lsm57145.946ENSCHIG00000021428-9547.727Capra_hircus
ENSSPAG00000005435lsm510061.176ENSTSYG00000028728-10061.176Carlito_syrichta
ENSSPAG00000005435lsm510060.440ENSTSYG00000006449-10060.440Carlito_syrichta
ENSSPAG00000005435lsm510044.595ENSTSYG00000036637-10044.595Carlito_syrichta
ENSSPAG00000005435lsm510059.524ENSTSYG00000026530-9159.524Carlito_syrichta
ENSSPAG00000005435lsm57682.222ENSCAPG00000006980LSM56082.222Cavia_aperea
ENSSPAG00000005435lsm510094.915ENSCPOG00000036386LSM510094.915Cavia_porcellus
ENSSPAG00000005435lsm510058.242ENSCCAG00000032123-10058.242Cebus_capucinus
ENSSPAG00000005435lsm510060.440ENSCCAG00000037808-10060.440Cebus_capucinus
ENSSPAG00000005435lsm510058.442ENSCCAG00000037334-10058.442Cebus_capucinus
ENSSPAG00000005435lsm510063.291ENSCCAG00000032792-10063.291Cebus_capucinus
ENSSPAG00000005435lsm510060.440ENSCCAG00000000821-10060.440Cebus_capucinus
ENSSPAG00000005435lsm57693.333ENSCATG00000040218LSM57393.333Cercocebus_atys
ENSSPAG00000005435lsm59850.000ENSCATG00000014790-10050.000Cercocebus_atys
ENSSPAG00000005435lsm510052.222ENSCLAG00000005062-9052.222Chinchilla_lanigera
ENSSPAG00000005435lsm510094.915ENSCLAG00000000202LSM510094.915Chinchilla_lanigera
ENSSPAG00000005435lsm57353.333ENSCHOG00000005335LSM59953.333Choloepus_hoffmanni
ENSSPAG00000005435lsm510060.440ENSCPBG00000013685LSM510060.440Chrysemys_picta_bellii
ENSSPAG00000005435lsm57682.222ENSCING00000020625-5182.222Ciona_intestinalis
ENSSPAG00000005435lsm57682.222ENSCSAVG00000001439-5182.222Ciona_savignyi
ENSSPAG00000005435lsm57693.333ENSCANG00000039909LSM57393.333Colobus_angolensis_palliatus
ENSSPAG00000005435lsm510094.915ENSCGRG00001015461Lsm510094.915Cricetulus_griseus_chok1gshd
ENSSPAG00000005435lsm57693.333ENSCGRG00000007677Lsm56093.333Cricetulus_griseus_crigri
ENSSPAG00000005435lsm510098.305ENSCSEG00000015286lsm510098.305Cynoglossus_semilaevis
ENSSPAG00000005435lsm57695.556ENSCVAG00000004262lsm510061.538Cyprinodon_variegatus
ENSSPAG00000005435lsm57695.556ENSDARG00000071573lsm57395.556Danio_rerio
ENSSPAG00000005435lsm59354.023ENSDNOG00000049495-9654.023Dasypus_novemcinctus
ENSSPAG00000005435lsm510060.440ENSDNOG00000034958LSM510060.440Dasypus_novemcinctus
ENSSPAG00000005435lsm510094.915ENSDORG00000009422Lsm510094.915Dipodomys_ordii
ENSSPAG00000005435lsm55891.176ENSETEG00000016074-5291.176Echinops_telfairi
ENSSPAG00000005435lsm59752.500ENSETEG00000010651-9952.500Echinops_telfairi
ENSSPAG00000005435lsm57667.347ENSETEG00000000777-9950.000Echinops_telfairi
ENSSPAG00000005435lsm510060.440ENSETEG00000018068LSM510060.440Echinops_telfairi
ENSSPAG00000005435lsm510058.242ENSEBUG00000008540lsm510058.242Eptatretus_burgeri
ENSSPAG00000005435lsm510060.440ENSEASG00005003500LSM510060.440Equus_asinus_asinus
ENSSPAG00000005435lsm510054.878ENSECAG00000018445LSM510054.878Equus_caballus
ENSSPAG00000005435lsm57686.667ENSEEUG00000004102LSM57586.667Erinaceus_europaeus
ENSSPAG00000005435lsm510061.538ENSELUG00000007792lsm510061.538Esox_lucius
ENSSPAG00000005435lsm510060.440ENSFCAG00000000230LSM510060.440Felis_catus
ENSSPAG00000005435lsm57693.333ENSFALG00000001892LSM55493.333Ficedula_albicollis
ENSSPAG00000005435lsm510094.915ENSFDAG00000008767LSM510094.915Fukomys_damarensis
ENSSPAG00000005435lsm58179.167ENSFHEG00000004011lsm55579.167Fundulus_heteroclitus
ENSSPAG00000005435lsm59861.111ENSGMOG00000018235lsm510061.111Gadus_morhua
ENSSPAG00000005435lsm510059.341ENSGALG00000041625LSM510059.341Gallus_gallus
ENSSPAG00000005435lsm57695.556ENSGAFG00000016824lsm57395.556Gambusia_affinis
ENSSPAG00000005435lsm510062.637ENSGACG00000005528lsm510062.637Gasterosteus_aculeatus
ENSSPAG00000005435lsm510060.440ENSGAGG00000015593LSM510060.440Gopherus_agassizii
ENSSPAG00000005435lsm510060.440ENSGGOG00000043469LSM510060.440Gorilla_gorilla
ENSSPAG00000005435lsm59359.770ENSHBUG00000013773lsm59959.770Haplochromis_burtoni
ENSSPAG00000005435lsm510094.915ENSHGLG00000011765LSM510094.915Heterocephalus_glaber_female
ENSSPAG00000005435lsm510089.831ENSHGLG00100015610LSM510089.831Heterocephalus_glaber_male
ENSSPAG00000005435lsm510094.915ENSHCOG00000008288lsm510094.915Hippocampus_comes
ENSSPAG00000005435lsm510060.440ENSIPUG00000021095LSM510060.440Ictalurus_punctatus
ENSSPAG00000005435lsm510094.915ENSSTOG00000012662LSM510094.915Ictidomys_tridecemlineatus
ENSSPAG00000005435lsm57680.000ENSSTOG00000033886-5180.000Ictidomys_tridecemlineatus
ENSSPAG00000005435lsm510057.895ENSJJAG00000016144-9257.895Jaculus_jaculus
ENSSPAG00000005435lsm58049.367ENSJJAG00000004475-10049.367Jaculus_jaculus
ENSSPAG00000005435lsm510091.525ENSJJAG00000012145-10091.525Jaculus_jaculus
ENSSPAG00000005435lsm510062.637ENSKMAG00000021861lsm510062.637Kryptolebias_marmoratus
ENSSPAG00000005435lsm510052.747ENSLBEG00000009235LSM57052.747Labrus_bergylta
ENSSPAG00000005435lsm510059.341ENSLACG00000022448LSM510059.341Latimeria_chalumnae
ENSSPAG00000005435lsm510060.440ENSLOCG00000012903lsm510060.440Lepisosteus_oculatus
ENSSPAG00000005435lsm510058.228ENSLAFG00000027938-10058.228Loxodonta_africana
ENSSPAG00000005435lsm510060.440ENSLAFG00000029579LSM510060.440Loxodonta_africana
ENSSPAG00000005435lsm510059.341ENSMFAG00000030152-10059.341Macaca_fascicularis
ENSSPAG00000005435lsm510060.440ENSMFAG00000038508LSM510060.440Macaca_fascicularis
ENSSPAG00000005435lsm59851.111ENSMMUG00000039822-10051.111Macaca_mulatta
ENSSPAG00000005435lsm510059.341ENSMMUG00000030131-10059.341Macaca_mulatta
ENSSPAG00000005435lsm510059.341ENSMNEG00000037935-10059.341Macaca_nemestrina
ENSSPAG00000005435lsm57693.333ENSMNEG00000015331LSM57393.333Macaca_nemestrina
ENSSPAG00000005435lsm510060.440ENSMLEG00000024945LSM510060.440Mandrillus_leucophaeus
ENSSPAG00000005435lsm59749.438ENSMLEG00000034037-10049.438Mandrillus_leucophaeus
ENSSPAG00000005435lsm510058.242ENSMAMG00000012869lsm510058.242Mastacembelus_armatus
ENSSPAG00000005435lsm59359.770ENSMZEG00005019554lsm59959.770Maylandia_zebra
ENSSPAG00000005435lsm510059.341ENSMGAG00000012117LSM510059.341Meleagris_gallopavo
ENSSPAG00000005435lsm510059.341ENSMAUG00000008132-10059.341Mesocricetus_auratus
ENSSPAG00000005435lsm510094.915ENSMAUG00000012222Lsm510094.915Mesocricetus_auratus
ENSSPAG00000005435lsm59871.622ENSMICG00000033928-9671.622Microcebus_murinus
ENSSPAG00000005435lsm510060.440ENSMICG00000005353LSM510060.440Microcebus_murinus
ENSSPAG00000005435lsm510094.915ENSMOCG00000012018Lsm510094.915Microtus_ochrogaster
ENSSPAG00000005435lsm57695.556ENSMMOG00000004026lsm55295.556Mola_mola
ENSSPAG00000005435lsm57693.333ENSMODG00000013274-7393.333Monodelphis_domestica
ENSSPAG00000005435lsm57688.889ENSMALG00000010343lsm57388.889Monopterus_albus
ENSSPAG00000005435lsm510094.915MGP_CAROLIEiJ_G0028421Lsm510094.915Mus_caroli
ENSSPAG00000005435lsm510094.915ENSMUSG00000091625Lsm510094.915Mus_musculus
ENSSPAG00000005435lsm510094.915MGP_PahariEiJ_G0022171Lsm510094.915Mus_pahari
ENSSPAG00000005435lsm510094.915MGP_SPRETEiJ_G0029423Lsm510094.915Mus_spretus
ENSSPAG00000005435lsm510060.440ENSMLUG00000017028LSM510060.440Myotis_lucifugus
ENSSPAG00000005435lsm510094.915ENSNGAG00000024142Lsm510094.915Nannospalax_galili
ENSSPAG00000005435lsm59862.500ENSNGAG00000022569-9662.500Nannospalax_galili
ENSSPAG00000005435lsm510060.920ENSNGAG00000017707-10060.920Nannospalax_galili
ENSSPAG00000005435lsm57695.556ENSNBRG00000011386lsm56095.556Neolamprologus_brichardi
ENSSPAG00000005435lsm510060.440ENSNLEG00000015268LSM510060.440Nomascus_leucogenys
ENSSPAG00000005435lsm57693.333ENSOPRG00000002443LSM56093.333Ochotona_princeps
ENSSPAG00000005435lsm510060.440ENSODEG00000019072-10060.440Octodon_degus
ENSSPAG00000005435lsm510094.915ENSODEG00000008258-10094.915Octodon_degus
ENSSPAG00000005435lsm56951.220ENSOANG00000014540-5551.220Ornithorhynchus_anatinus
ENSSPAG00000005435lsm510060.440ENSOCUG00000029043LSM510060.440Oryctolagus_cuniculus
ENSSPAG00000005435lsm510061.538ENSORLG00000027725lsm55861.538Oryzias_latipes
ENSSPAG00000005435lsm57693.333ENSORLG00020003019lsm58656.322Oryzias_latipes_hni
ENSSPAG00000005435lsm510061.538ENSORLG00015003338lsm510061.538Oryzias_latipes_hsok
ENSSPAG00000005435lsm57693.333ENSOMEG00000001078lsm510060.440Oryzias_melastigma
ENSSPAG00000005435lsm510060.440ENSOGAG00000013892LSM510060.440Otolemur_garnettii
ENSSPAG00000005435lsm510060.440ENSOARG00000006944LSM510060.440Ovis_aries
ENSSPAG00000005435lsm510060.440ENSPPAG00000003697-10060.440Pan_paniscus
ENSSPAG00000005435lsm510060.440ENSPPRG00000002550LSM510060.440Panthera_pardus
ENSSPAG00000005435lsm510060.440ENSPTIG00000015604LSM510060.440Panthera_tigris_altaica
ENSSPAG00000005435lsm510045.977ENSPTRG00000049488-10051.724Pan_troglodytes
ENSSPAG00000005435lsm510060.440ENSPTRG00000019057LSM510060.440Pan_troglodytes
ENSSPAG00000005435lsm510060.440ENSPANG00000032179-10060.440Papio_anubis
ENSSPAG00000005435lsm510058.242ENSPANG00000033477-10058.242Papio_anubis
ENSSPAG00000005435lsm59851.111ENSPANG00000032538-10051.111Papio_anubis
ENSSPAG00000005435lsm510062.637ENSPKIG00000011910lsm510062.637Paramormyrops_kingsleyae
ENSSPAG00000005435lsm57393.023ENSPSIG00000014796LSM55893.023Pelodiscus_sinensis
ENSSPAG00000005435lsm57695.556ENSPMGG00000011699lsm57395.556Periophthalmus_magnuspinnatus
ENSSPAG00000005435lsm510045.122ENSPEMG00000022375-10045.122Peromyscus_maniculatus_bairdii
ENSSPAG00000005435lsm510061.538ENSPFOG00000001433lsm510061.538Poecilia_formosa
ENSSPAG00000005435lsm510061.538ENSPLAG00000009665lsm510061.538Poecilia_latipinna
ENSSPAG00000005435lsm510061.538ENSPMEG00000022265lsm510061.538Poecilia_mexicana
ENSSPAG00000005435lsm57695.556ENSPREG00000022452lsm57395.556Poecilia_reticulata
ENSSPAG00000005435lsm510058.242ENSPPYG00000017661LSM510058.242Pongo_abelii
ENSSPAG00000005435lsm58356.790ENSPCAG00000013740LSM510056.790Procavia_capensis
ENSSPAG00000005435lsm510060.440ENSPVAG00000009786LSM510060.440Pteropus_vampyrus
ENSSPAG00000005435lsm59359.770ENSPNYG00000022236lsm59959.770Pundamilia_nyererei
ENSSPAG00000005435lsm510060.440ENSPNAG00000001887lsm510060.440Pygocentrus_nattereri
ENSSPAG00000005435lsm510060.440ENSRNOG00000042126Lsm510060.440Rattus_norvegicus
ENSSPAG00000005435lsm510058.696ENSRNOG00000027305AABR07065089.110058.696Rattus_norvegicus
ENSSPAG00000005435lsm510060.440ENSRBIG00000030714-10060.440Rhinopithecus_bieti
ENSSPAG00000005435lsm510060.440ENSRBIG00000030340-10060.440Rhinopithecus_bieti
ENSSPAG00000005435lsm510059.341ENSRBIG00000024431-10059.341Rhinopithecus_bieti
ENSSPAG00000005435lsm57693.333ENSRBIG00000027803-7393.333Rhinopithecus_bieti
ENSSPAG00000005435lsm510060.440ENSRROG00000023884-10060.440Rhinopithecus_roxellana
ENSSPAG00000005435lsm510060.440ENSRROG00000004655-10060.440Rhinopithecus_roxellana
ENSSPAG00000005435lsm57693.333ENSRROG00000042782-7393.333Rhinopithecus_roxellana
ENSSPAG00000005435lsm510060.759ENSSBOG00000034794-10060.759Saimiri_boliviensis_boliviensis
ENSSPAG00000005435lsm510060.440ENSSBOG00000012312LSM510060.440Saimiri_boliviensis_boliviensis
ENSSPAG00000005435lsm510058.242ENSSBOG00000019124-10058.242Saimiri_boliviensis_boliviensis
ENSSPAG00000005435lsm510062.637ENSSFOG00015010099lsm510062.637Scleropages_formosus
ENSSPAG00000005435lsm510098.305ENSSMAG00000007895lsm510098.305Scophthalmus_maximus
ENSSPAG00000005435lsm57695.556ENSSDUG00000010762lsm57395.556Seriola_dumerili
ENSSPAG00000005435lsm510098.305ENSSLDG00000025242lsm510098.305Seriola_lalandi_dorsalis
ENSSPAG00000005435lsm57693.333ENSSPUG00000002690LSM57393.333Sphenodon_punctatus
ENSSPAG00000005435lsm57693.333ENSSSCG00000026064-10060.440Sus_scrofa
ENSSPAG00000005435lsm510058.242ENSTGUG00000017539LSM510058.242Taeniopygia_guttata
ENSSPAG00000005435lsm58550.575ENSTRUG00000017749lsm56550.575Takifugu_rubripes
ENSSPAG00000005435lsm510059.341ENSTNIG00000008695lsm510059.341Tetraodon_nigroviridis
ENSSPAG00000005435lsm510060.440ENSTBEG00000004876LSM510060.440Tupaia_belangeri
ENSSPAG00000005435lsm510060.440ENSTTRG00000004237LSM510060.440Tursiops_truncatus
ENSSPAG00000005435lsm59860.000ENSUMAG00000002625LSM56560.000Ursus_maritimus
ENSSPAG00000005435lsm510060.440ENSVPAG00000009985LSM510060.440Vicugna_pacos
ENSSPAG00000005435lsm510060.440ENSVVUG00000021311LSM510060.440Vulpes_vulpes
ENSSPAG00000005435lsm58556.098ENSXETG00000026465lsm510056.098Xenopus_tropicalis
ENSSPAG00000005435lsm57695.556ENSXCOG00000015348lsm57395.556Xiphophorus_couchianus
ENSSPAG00000005435lsm510061.538ENSXMAG00000029988lsm510061.538Xiphophorus_maculatus

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