EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000005508 (Gene tree)
Gene ID: 103363392
Gene Symbol: lsg1
Alias: fb99b06|wu:fb99b06|zgc:76988
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 9148 bases
Position: chrKK580728.1:1047-10194
Accession: 103363392
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000007359	MMR_HSR1	PF01926.23	1.5e-14	1	1
ENSSPAP00000007331	MMR_HSR1	PF01926.23	1.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000007500	-	1797	-	ENSSPAP00000007359	598 (aa)	-	-
ENSSPAT00000007471	-	1815	XM_008290145	ENSSPAP00000007331	604 (aa)	XP_008288367	-

Gene Model

Click here to download ENSSPAG00000005508's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000005508's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000005508	lsg1	99	63.485	ENSG00000041802	LSG1	98	74.713	Homo_sapiens
ENSSPAG00000005508	lsg1	100	88.301	ENSAPOG00000009694	lsg1	100	87.660	Acanthochromis_polyacanthus
ENSSPAG00000005508	lsg1	100	61.991	ENSAMEG00000009343	LSG1	84	69.767	Ailuropoda_melanoleuca
ENSSPAG00000005508	lsg1	99	82.010	ENSACIG00000012406	lsg1	100	81.429	Amphilophus_citrinellus
ENSSPAG00000005508	lsg1	100	88.160	ENSAOCG00000016066	lsg1	100	87.040	Amphiprion_ocellaris
ENSSPAG00000005508	lsg1	100	88.160	ENSAPEG00000003252	lsg1	100	87.200	Amphiprion_percula
ENSSPAG00000005508	lsg1	99	80.547	ENSATEG00000011794	lsg1	100	78.583	Anabas_testudineus
ENSSPAG00000005508	lsg1	95	62.222	ENSACAG00000004222	LSG1	100	61.182	Anolis_carolinensis
ENSSPAG00000005508	lsg1	99	63.086	ENSANAG00000021153	LSG1	99	63.636	Aotus_nancymaae
ENSSPAG00000005508	lsg1	100	81.413	ENSACLG00000000520	lsg1	100	80.952	Astatotilapia_calliptera
ENSSPAG00000005508	lsg1	100	73.261	ENSAMXG00000008271	lsg1	100	71.827	Astyanax_mexicanus
ENSSPAG00000005508	lsg1	99	64.067	ENSBTAG00000008461	LSG1	99	63.609	Bos_taurus
ENSSPAG00000005508	lsg1	76	43.777	WBGene00016907	C53H9.2	80	55.738	Caenorhabditis_elegans
ENSSPAG00000005508	lsg1	99	63.086	ENSCJAG00000013962	LSG1	99	63.636	Callithrix_jacchus
ENSSPAG00000005508	lsg1	95	65.501	ENSCAFG00000013445	LSG1	100	58.898	Canis_familiaris
ENSSPAG00000005508	lsg1	100	63.801	ENSCAFG00020002216	LSG1	100	57.549	Canis_lupus_dingo
ENSSPAG00000005508	lsg1	100	64.407	ENSCHIG00000015769	LSG1	100	63.790	Capra_hircus
ENSSPAG00000005508	lsg1	95	65.894	ENSCAPG00000009856	LSG1	99	66.116	Cavia_aperea
ENSSPAG00000005508	lsg1	99	63.664	ENSCCAG00000035744	LSG1	99	64.220	Cebus_capucinus
ENSSPAG00000005508	lsg1	99	63.636	ENSCATG00000042060	LSG1	99	61.970	Cercocebus_atys
ENSSPAG00000005508	lsg1	99	63.333	ENSCSAG00000008796	LSG1	92	62.879	Chlorocebus_sabaeus
ENSSPAG00000005508	lsg1	83	50.000	ENSCING00000007079	-	94	58.673	Ciona_intestinalis
ENSSPAG00000005508	lsg1	82	50.296	ENSCSAVG00000002514	-	88	59.686	Ciona_savignyi
ENSSPAG00000005508	lsg1	99	63.333	ENSCANG00000030709	LSG1	99	62.727	Colobus_angolensis_palliatus
ENSSPAG00000005508	lsg1	99	65.457	ENSCGRG00001019846	Lsg1	99	65.457	Cricetulus_griseus_chok1gshd
ENSSPAG00000005508	lsg1	99	64.154	ENSCGRG00000014617	Lsg1	99	63.692	Cricetulus_griseus_crigri
ENSSPAG00000005508	lsg1	99	77.600	ENSCSEG00000008522	lsg1	100	76.176	Cynoglossus_semilaevis
ENSSPAG00000005508	lsg1	98	80.000	ENSCVAG00000002484	lsg1	100	78.605	Cyprinodon_variegatus
ENSSPAG00000005508	lsg1	100	73.292	ENSDARG00000015352	lsg1	100	73.913	Danio_rerio
ENSSPAG00000005508	lsg1	99	62.367	ENSDNOG00000006224	LSG1	99	62.671	Dasypus_novemcinctus
ENSSPAG00000005508	lsg1	99	51.050	FBgn0266284	Ns3	99	50.720	Drosophila_melanogaster
ENSSPAG00000005508	lsg1	91	70.667	ENSETEG00000003888	LSG1	89	70.667	Echinops_telfairi
ENSSPAG00000005508	lsg1	88	57.391	ENSEBUG00000003119	lsg1	85	56.000	Eptatretus_burgeri
ENSSPAG00000005508	lsg1	99	63.843	ENSEASG00005000678	LSG1	99	63.238	Equus_asinus_asinus
ENSSPAG00000005508	lsg1	99	63.389	ENSECAG00000017659	LSG1	99	63.086	Equus_caballus
ENSSPAG00000005508	lsg1	87	58.333	ENSEEUG00000015217	LSG1	87	58.333	Erinaceus_europaeus
ENSSPAG00000005508	lsg1	100	74.367	ENSELUG00000023973	lsg1	100	74.204	Esox_lucius
ENSSPAG00000005508	lsg1	93	62.945	ENSFALG00000007210	LSG1	79	71.429	Ficedula_albicollis
ENSSPAG00000005508	lsg1	99	62.809	ENSFDAG00000017373	LSG1	99	63.566	Fukomys_damarensis
ENSSPAG00000005508	lsg1	98	79.968	ENSFHEG00000003680	lsg1	100	78.774	Fundulus_heteroclitus
ENSSPAG00000005508	lsg1	99	70.128	ENSGMOG00000015834	lsg1	90	79.121	Gadus_morhua
ENSSPAG00000005508	lsg1	99	60.725	ENSGALG00000007058	LSG1	87	60.968	Gallus_gallus
ENSSPAG00000005508	lsg1	98	81.054	ENSGAFG00000015831	lsg1	100	79.294	Gambusia_affinis
ENSSPAG00000005508	lsg1	99	78.435	ENSGACG00000009323	lsg1	100	77.778	Gasterosteus_aculeatus
ENSSPAG00000005508	lsg1	99	63.182	ENSGGOG00000000520	LSG1	99	63.182	Gorilla_gorilla
ENSSPAG00000005508	lsg1	100	82.737	ENSHBUG00000005659	lsg1	100	82.115	Haplochromis_burtoni
ENSSPAG00000005508	lsg1	99	63.722	ENSHGLG00000017390	LSG1	99	64.196	Heterocephalus_glaber_female
ENSSPAG00000005508	lsg1	99	63.722	ENSHGLG00100018587	LSG1	99	64.196	Heterocephalus_glaber_male
ENSSPAG00000005508	lsg1	98	79.260	ENSHCOG00000016848	lsg1	100	78.056	Hippocampus_comes
ENSSPAG00000005508	lsg1	100	73.975	ENSIPUG00000008631	lsg1	100	73.817	Ictalurus_punctatus
ENSSPAG00000005508	lsg1	78	58.964	ENSSTOG00000010234	LSG1	92	59.677	Ictidomys_tridecemlineatus
ENSSPAG00000005508	lsg1	99	64.642	ENSJJAG00000015513	Lsg1	99	64.531	Jaculus_jaculus
ENSSPAG00000005508	lsg1	99	78.502	ENSKMAG00000009681	lsg1	100	77.157	Kryptolebias_marmoratus
ENSSPAG00000005508	lsg1	99	80.132	ENSLBEG00000024261	lsg1	100	80.713	Labrus_bergylta
ENSSPAG00000005508	lsg1	99	70.487	ENSLOCG00000004918	lsg1	100	69.771	Lepisosteus_oculatus
ENSSPAG00000005508	lsg1	99	64.660	ENSLAFG00000012919	-	99	63.567	Loxodonta_africana
ENSSPAG00000005508	lsg1	99	63.333	ENSMFAG00000039903	LSG1	99	61.667	Macaca_fascicularis
ENSSPAG00000005508	lsg1	99	63.333	ENSMMUG00000010708	LSG1	99	62.879	Macaca_mulatta
ENSSPAG00000005508	lsg1	99	63.333	ENSMNEG00000031538	LSG1	99	61.818	Macaca_nemestrina
ENSSPAG00000005508	lsg1	99	63.333	ENSMLEG00000041184	LSG1	99	62.879	Mandrillus_leucophaeus
ENSSPAG00000005508	lsg1	100	79.294	ENSMAMG00000000470	lsg1	100	78.365	Mastacembelus_armatus
ENSSPAG00000005508	lsg1	100	82.582	ENSMZEG00005017865	lsg1	100	81.960	Maylandia_zebra
ENSSPAG00000005508	lsg1	88	61.525	ENSMGAG00000007050	LSG1	99	61.356	Meleagris_gallopavo
ENSSPAG00000005508	lsg1	90	65.324	ENSMAUG00000016976	Lsg1	92	64.200	Mesocricetus_auratus
ENSSPAG00000005508	lsg1	99	63.222	ENSMICG00000049087	LSG1	99	62.614	Microcebus_murinus
ENSSPAG00000005508	lsg1	99	63.777	ENSMOCG00000022136	Lsg1	99	63.566	Microtus_ochrogaster
ENSSPAG00000005508	lsg1	99	77.612	ENSMMOG00000008884	lsg1	98	78.667	Mola_mola
ENSSPAG00000005508	lsg1	99	56.549	ENSMODG00000019828	LSG1	99	49.466	Monodelphis_domestica
ENSSPAG00000005508	lsg1	100	64.660	MGP_CAROLIEiJ_G0020648	Lsg1	100	64.660	Mus_caroli
ENSSPAG00000005508	lsg1	100	64.969	ENSMUSG00000022538	Lsg1	100	64.407	Mus_musculus
ENSSPAG00000005508	lsg1	99	64.062	MGP_PahariEiJ_G0016352	Lsg1	100	63.344	Mus_pahari
ENSSPAG00000005508	lsg1	100	64.660	MGP_SPRETEiJ_G0021544	Lsg1	100	64.561	Mus_spretus
ENSSPAG00000005508	lsg1	100	63.014	ENSMLUG00000012548	LSG1	100	63.415	Myotis_lucifugus
ENSSPAG00000005508	lsg1	99	64.219	ENSNGAG00000021872	Lsg1	99	64.006	Nannospalax_galili
ENSSPAG00000005508	lsg1	99	62.784	ENSNLEG00000008293	LSG1	99	62.879	Nomascus_leucogenys
ENSSPAG00000005508	lsg1	71	71.134	ENSMEUG00000009041	-	74	71.134	Notamacropus_eugenii
ENSSPAG00000005508	lsg1	100	81.048	ENSONIG00000002635	lsg1	100	80.740	Oreochromis_niloticus
ENSSPAG00000005508	lsg1	95	67.154	ENSOANG00000012742	LSG1	99	66.667	Ornithorhynchus_anatinus
ENSSPAG00000005508	lsg1	99	64.448	ENSOCUG00000004817	LSG1	99	63.086	Oryctolagus_cuniculus
ENSSPAG00000005508	lsg1	99	79.967	ENSORLG00000007695	lsg1	100	78.871	Oryzias_latipes
ENSSPAG00000005508	lsg1	99	78.339	ENSORLG00020016286	lsg1	100	77.636	Oryzias_latipes_hni
ENSSPAG00000005508	lsg1	99	80.402	ENSORLG00015012025	lsg1	100	79.805	Oryzias_latipes_hsok
ENSSPAG00000005508	lsg1	99	77.741	ENSOMEG00000022379	lsg1	100	77.047	Oryzias_melastigma
ENSSPAG00000005508	lsg1	100	63.872	ENSOARG00000020403	LSG1	100	63.567	Ovis_aries
ENSSPAG00000005508	lsg1	99	64.242	ENSPPAG00000029271	LSG1	99	63.182	Pan_paniscus
ENSSPAG00000005508	lsg1	100	62.991	ENSPTIG00000010789	LSG1	88	67.029	Panthera_tigris_altaica
ENSSPAG00000005508	lsg1	99	64.091	ENSPTRG00000015760	LSG1	99	63.030	Pan_troglodytes
ENSSPAG00000005508	lsg1	99	63.182	ENSPANG00000018249	LSG1	99	61.515	Papio_anubis
ENSSPAG00000005508	lsg1	99	70.440	ENSPKIG00000002895	lsg1	99	70.440	Paramormyrops_kingsleyae
ENSSPAG00000005508	lsg1	95	61.587	ENSPSIG00000009821	LSG1	99	60.476	Pelodiscus_sinensis
ENSSPAG00000005508	lsg1	95	77.038	ENSPMGG00000000931	lsg1	100	76.705	Periophthalmus_magnuspinnatus
ENSSPAG00000005508	lsg1	99	62.538	ENSPEMG00000012082	-	99	62.577	Peromyscus_maniculatus_bairdii
ENSSPAG00000005508	lsg1	99	59.639	ENSPMAG00000007451	lsg1	99	59.036	Petromyzon_marinus
ENSSPAG00000005508	lsg1	99	64.433	ENSPCIG00000013890	LSG1	81	63.874	Phascolarctos_cinereus
ENSSPAG00000005508	lsg1	98	78.652	ENSPFOG00000021882	lsg1	100	77.188	Poecilia_formosa
ENSSPAG00000005508	lsg1	98	79.417	ENSPLAG00000019536	lsg1	100	77.918	Poecilia_latipinna
ENSSPAG00000005508	lsg1	98	77.600	ENSPMEG00000017281	lsg1	100	76.168	Poecilia_mexicana
ENSSPAG00000005508	lsg1	98	68.998	ENSPREG00000006048	lsg1	100	67.907	Poecilia_reticulata
ENSSPAG00000005508	lsg1	92	62.171	ENSPPYG00000014425	LSG1	100	61.184	Pongo_abelii
ENSSPAG00000005508	lsg1	92	70.667	ENSPCAG00000005511	LSG1	81	70.667	Procavia_capensis
ENSSPAG00000005508	lsg1	99	63.053	ENSPCOG00000012360	LSG1	99	62.901	Propithecus_coquereli
ENSSPAG00000005508	lsg1	100	81.413	ENSPNYG00000021994	lsg1	100	80.952	Pundamilia_nyererei
ENSSPAG00000005508	lsg1	100	74.766	ENSPNAG00000015533	lsg1	100	74.143	Pygocentrus_nattereri
ENSSPAG00000005508	lsg1	100	63.581	ENSRNOG00000001727	Lsg1	100	62.766	Rattus_norvegicus
ENSSPAG00000005508	lsg1	99	62.974	ENSRBIG00000029053	LSG1	99	62.519	Rhinopithecus_bieti
ENSSPAG00000005508	lsg1	99	62.974	ENSRROG00000037702	LSG1	99	62.519	Rhinopithecus_roxellana
ENSSPAG00000005508	lsg1	82	42.256	YGL099W	LSG1	69	55.030	Saccharomyces_cerevisiae
ENSSPAG00000005508	lsg1	99	63.238	ENSSBOG00000034938	LSG1	99	63.788	Saimiri_boliviensis_boliviensis
ENSSPAG00000005508	lsg1	80	61.714	ENSSHAG00000003487	LSG1	100	61.568	Sarcophilus_harrisii
ENSSPAG00000005508	lsg1	99	72.480	ENSSFOG00015008955	lsg1	100	71.987	Scleropages_formosus
ENSSPAG00000005508	lsg1	99	81.991	ENSSDUG00000004622	lsg1	100	79.412	Seriola_dumerili
ENSSPAG00000005508	lsg1	99	82.010	ENSSLDG00000010869	lsg1	100	80.952	Seriola_lalandi_dorsalis
ENSSPAG00000005508	lsg1	85	65.385	ENSSARG00000012981	LSG1	74	69.799	Sorex_araneus
ENSSPAG00000005508	lsg1	100	65.961	ENSSPUG00000016347	LSG1	100	65.350	Sphenodon_punctatus
ENSSPAG00000005508	lsg1	100	63.735	ENSSSCG00000011827	LSG1	100	62.654	Sus_scrofa
ENSSPAG00000005508	lsg1	89	61.500	ENSTGUG00000009068	LSG1	100	60.601	Taeniopygia_guttata
ENSSPAG00000005508	lsg1	98	76.509	ENSTRUG00000017380	lsg1	100	75.199	Takifugu_rubripes
ENSSPAG00000005508	lsg1	98	79.549	ENSTNIG00000015570	lsg1	100	77.865	Tetraodon_nigroviridis
ENSSPAG00000005508	lsg1	90	68.333	ENSTTRG00000000559	LSG1	91	68.333	Tursiops_truncatus
ENSSPAG00000005508	lsg1	100	62.085	ENSUAMG00000012454	LSG1	100	58.069	Ursus_americanus
ENSSPAG00000005508	lsg1	100	62.085	ENSUMAG00000000855	LSG1	100	58.069	Ursus_maritimus
ENSSPAG00000005508	lsg1	95	60.890	ENSVPAG00000012400	LSG1	100	59.936	Vicugna_pacos
ENSSPAG00000005508	lsg1	97	65.087	ENSVVUG00000008956	LSG1	98	58.269	Vulpes_vulpes
ENSSPAG00000005508	lsg1	100	66.154	ENSXETG00000003451	lsg1	100	67.138	Xenopus_tropicalis
ENSSPAG00000005508	lsg1	98	80.619	ENSXCOG00000003239	lsg1	100	79.524	Xiphophorus_couchianus
ENSSPAG00000005508	lsg1	98	78.418	ENSXMAG00000005536	lsg1	100	77.047	Xiphophorus_maculatus