EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000005633 (Gene tree)
Gene ID: 103356155
Gene Symbol: rnpc3
Alias: caliban|clbn|zgc:136847
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 20155 bases
Position: chrKK580257.1:568825-588979
Accession: 103356155
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000007387	RRM_1	PF00076.22	4.1e-15	1	2
ENSSPAP00000007387	RRM_1	PF00076.22	4.1e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000007529	-	1473	XM_008280220	ENSSPAP00000007387	490 (aa)	XP_008278442	-

Gene Model

Click here to download ENSSPAG00000005633's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000005633's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000005633	rnpc3	97	56.415	ENSG00000185946	RNPC3	95	55.804	Homo_sapiens
ENSSPAG00000005633	rnpc3	100	89.703	ENSAPOG00000017371	rnpc3	100	89.703	Acanthochromis_polyacanthus
ENSSPAG00000005633	rnpc3	97	56.187	ENSAMEG00000001694	RNPC3	95	55.375	Ailuropoda_melanoleuca
ENSSPAG00000005633	rnpc3	99	79.208	ENSACIG00000021043	rnpc3	99	80.800	Amphilophus_citrinellus
ENSSPAG00000005633	rnpc3	100	89.020	ENSAOCG00000014052	rnpc3	98	89.020	Amphiprion_ocellaris
ENSSPAG00000005633	rnpc3	100	89.020	ENSAPEG00000008739	rnpc3	98	89.020	Amphiprion_percula
ENSSPAG00000005633	rnpc3	100	80.233	ENSATEG00000021263	rnpc3	100	80.426	Anabas_testudineus
ENSSPAG00000005633	rnpc3	89	55.556	ENSAPLG00000015605	RNPC3	99	55.111	Anas_platyrhynchos
ENSSPAG00000005633	rnpc3	95	55.509	ENSACAG00000002029	RNPC3	96	54.472	Anolis_carolinensis
ENSSPAG00000005633	rnpc3	97	56.098	ENSANAG00000019950	RNPC3	95	55.488	Aotus_nancymaae
ENSSPAG00000005633	rnpc3	99	83.567	ENSACLG00000014702	rnpc3	99	84.569	Astatotilapia_calliptera
ENSSPAG00000005633	rnpc3	99	64.892	ENSAMXG00000033372	rnpc3	97	66.467	Astyanax_mexicanus
ENSSPAG00000005633	rnpc3	97	56.212	ENSBTAG00000019091	RNPC3	95	55.601	Bos_taurus
ENSSPAG00000005633	rnpc3	97	56.907	ENSCJAG00000035686	RNPC3	95	56.495	Callithrix_jacchus
ENSSPAG00000005633	rnpc3	97	56.098	ENSCAFG00000019972	RNPC3	95	55.285	Canis_familiaris
ENSSPAG00000005633	rnpc3	97	56.098	ENSCAFG00020011300	RNPC3	95	55.285	Canis_lupus_dingo
ENSSPAG00000005633	rnpc3	97	56.504	ENSCHIG00000020361	RNPC3	95	55.488	Capra_hircus
ENSSPAG00000005633	rnpc3	97	51.575	ENSTSYG00000030256	RNPC3	95	54.472	Carlito_syrichta
ENSSPAG00000005633	rnpc3	85	47.209	ENSCAPG00000013600	RNPC3	58	51.429	Cavia_aperea
ENSSPAG00000005633	rnpc3	97	54.183	ENSCPOG00000031638	RNPC3	95	54.564	Cavia_porcellus
ENSSPAG00000005633	rnpc3	97	55.691	ENSCCAG00000024301	RNPC3	95	55.466	Cebus_capucinus
ENSSPAG00000005633	rnpc3	97	56.301	ENSCATG00000002086	RNPC3	95	55.691	Cercocebus_atys
ENSSPAG00000005633	rnpc3	97	53.600	ENSCLAG00000005169	RNPC3	95	53.971	Chinchilla_lanigera
ENSSPAG00000005633	rnpc3	97	56.098	ENSCSAG00000001519	RNPC3	95	55.488	Chlorocebus_sabaeus
ENSSPAG00000005633	rnpc3	97	56.619	ENSCPBG00000028311	RNPC3	95	56.823	Chrysemys_picta_bellii
ENSSPAG00000005633	rnpc3	94	37.500	ENSCSAVG00000002800	-	74	55.385	Ciona_savignyi
ENSSPAG00000005633	rnpc3	97	55.894	ENSCANG00000031444	RNPC3	95	55.285	Colobus_angolensis_palliatus
ENSSPAG00000005633	rnpc3	96	56.033	ENSCGRG00001019276	Rnpc3	95	55.419	Cricetulus_griseus_chok1gshd
ENSSPAG00000005633	rnpc3	89	53.437	ENSCGRG00000000053	Rnpc3	99	52.772	Cricetulus_griseus_crigri
ENSSPAG00000005633	rnpc3	98	76.122	ENSCSEG00000013475	rnpc3	97	72.449	Cynoglossus_semilaevis
ENSSPAG00000005633	rnpc3	100	80.664	ENSCVAG00000002645	rnpc3	100	80.859	Cyprinodon_variegatus
ENSSPAG00000005633	rnpc3	99	66.004	ENSDARG00000011247	rnpc3	94	73.295	Danio_rerio
ENSSPAG00000005633	rnpc3	97	55.601	ENSDNOG00000047498	-	95	55.193	Dasypus_novemcinctus
ENSSPAG00000005633	rnpc3	97	55.193	ENSDNOG00000044555	-	95	54.786	Dasypus_novemcinctus
ENSSPAG00000005633	rnpc3	97	55.601	ENSDORG00000027343	Rnpc3	95	54.990	Dipodomys_ordii
ENSSPAG00000005633	rnpc3	96	51.779	ENSEBUG00000002068	rnpc3	96	50.000	Eptatretus_burgeri
ENSSPAG00000005633	rnpc3	97	56.504	ENSEASG00005015957	RNPC3	95	55.894	Equus_asinus_asinus
ENSSPAG00000005633	rnpc3	97	56.504	ENSECAG00000021148	RNPC3	95	55.894	Equus_caballus
ENSSPAG00000005633	rnpc3	97	70.059	ENSELUG00000002264	rnpc3	97	68.039	Esox_lucius
ENSSPAG00000005633	rnpc3	97	55.781	ENSFCAG00000024312	RNPC3	95	55.172	Felis_catus
ENSSPAG00000005633	rnpc3	89	56.222	ENSFALG00000002580	RNPC3	99	57.416	Ficedula_albicollis
ENSSPAG00000005633	rnpc3	97	54.970	ENSFDAG00000019948	RNPC3	95	54.361	Fukomys_damarensis
ENSSPAG00000005633	rnpc3	100	75.551	ENSFHEG00000020647	rnpc3	100	75.904	Fundulus_heteroclitus
ENSSPAG00000005633	rnpc3	98	73.045	ENSGMOG00000019213	rnpc3	97	72.371	Gadus_morhua
ENSSPAG00000005633	rnpc3	100	77.362	ENSGAFG00000017236	rnpc3	100	78.937	Gambusia_affinis
ENSSPAG00000005633	rnpc3	100	79.604	ENSGACG00000002048	rnpc3	99	78.835	Gasterosteus_aculeatus
ENSSPAG00000005633	rnpc3	97	58.452	ENSGAGG00000008438	RNPC3	94	57.841	Gopherus_agassizii
ENSSPAG00000005633	rnpc3	97	47.639	ENSGGOG00000026201	-	53	50.000	Gorilla_gorilla
ENSSPAG00000005633	rnpc3	83	85.417	ENSHBUG00000015966	rnpc3	85	85.417	Haplochromis_burtoni
ENSSPAG00000005633	rnpc3	97	53.187	ENSHGLG00000001708	RNPC3	95	53.753	Heterocephalus_glaber_female
ENSSPAG00000005633	rnpc3	97	53.187	ENSHGLG00100003005	RNPC3	95	53.753	Heterocephalus_glaber_male
ENSSPAG00000005633	rnpc3	99	75.494	ENSHCOG00000017135	rnpc3	100	75.494	Hippocampus_comes
ENSSPAG00000005633	rnpc3	99	65.600	ENSIPUG00000002916	rnpc3	99	65.269	Ictalurus_punctatus
ENSSPAG00000005633	rnpc3	97	55.691	ENSSTOG00000025020	RNPC3	95	55.081	Ictidomys_tridecemlineatus
ENSSPAG00000005633	rnpc3	96	55.010	ENSJJAG00000010203	Rnpc3	96	54.158	Jaculus_jaculus
ENSSPAG00000005633	rnpc3	99	81.874	ENSKMAG00000017358	rnpc3	99	82.077	Kryptolebias_marmoratus
ENSSPAG00000005633	rnpc3	100	83.432	ENSLBEG00000024901	rnpc3	98	83.629	Labrus_bergylta
ENSSPAG00000005633	rnpc3	97	59.674	ENSLACG00000005720	RNPC3	90	59.674	Latimeria_chalumnae
ENSSPAG00000005633	rnpc3	99	62.970	ENSLOCG00000007986	rnpc3	99	62.376	Lepisosteus_oculatus
ENSSPAG00000005633	rnpc3	97	54.453	ENSLAFG00000032342	RNPC3	95	55.263	Loxodonta_africana
ENSSPAG00000005633	rnpc3	97	56.301	ENSMFAG00000002004	RNPC3	95	55.691	Macaca_fascicularis
ENSSPAG00000005633	rnpc3	97	41.393	ENSMFAG00000002917	-	95	42.083	Macaca_fascicularis
ENSSPAG00000005633	rnpc3	81	54.206	ENSMMUG00000002098	-	83	53.738	Macaca_mulatta
ENSSPAG00000005633	rnpc3	97	56.098	ENSMMUG00000018039	RNPC3	95	55.488	Macaca_mulatta
ENSSPAG00000005633	rnpc3	97	53.049	ENSMNEG00000033950	RNPC3	95	52.439	Macaca_nemestrina
ENSSPAG00000005633	rnpc3	97	44.167	ENSMLEG00000034644	-	95	43.478	Mandrillus_leucophaeus
ENSSPAG00000005633	rnpc3	97	56.301	ENSMLEG00000033628	RNPC3	95	55.691	Mandrillus_leucophaeus
ENSSPAG00000005633	rnpc3	100	73.228	ENSMAMG00000007496	rnpc3	100	73.425	Mastacembelus_armatus
ENSSPAG00000005633	rnpc3	99	82.066	ENSMZEG00005020233	rnpc3	99	83.041	Maylandia_zebra
ENSSPAG00000005633	rnpc3	89	55.727	ENSMGAG00000006381	RNPC3	99	54.505	Meleagris_gallopavo
ENSSPAG00000005633	rnpc3	97	56.327	ENSMAUG00000001358	Rnpc3	95	55.714	Mesocricetus_auratus
ENSSPAG00000005633	rnpc3	97	51.772	ENSMICG00000029591	RNPC3	95	54.675	Microcebus_murinus
ENSSPAG00000005633	rnpc3	97	53.400	ENSMOCG00000013423	Rnpc3	95	55.601	Microtus_ochrogaster
ENSSPAG00000005633	rnpc3	100	78.819	ENSMMOG00000005309	rnpc3	100	79.022	Mola_mola
ENSSPAG00000005633	rnpc3	97	56.008	ENSMODG00000002946	RNPC3	95	55.804	Monodelphis_domestica
ENSSPAG00000005633	rnpc3	98	77.844	ENSMALG00000015471	rnpc3	98	77.844	Monopterus_albus
ENSSPAG00000005633	rnpc3	97	56.592	MGP_CAROLIEiJ_G0025555	Rnpc3	96	55.984	Mus_caroli
ENSSPAG00000005633	rnpc3	97	56.364	ENSMUSG00000027981	Rnpc3	99	53.747	Mus_musculus
ENSSPAG00000005633	rnpc3	97	55.936	MGP_PahariEiJ_G0027001	Rnpc3	97	55.332	Mus_pahari
ENSSPAG00000005633	rnpc3	97	53.373	MGP_SPRETEiJ_G0026505	Rnpc3	96	55.556	Mus_spretus
ENSSPAG00000005633	rnpc3	97	55.800	ENSMPUG00000007349	RNPC3	95	55.400	Mustela_putorius_furo
ENSSPAG00000005633	rnpc3	97	52.894	ENSMLUG00000028743	RNPC3	95	55.081	Myotis_lucifugus
ENSSPAG00000005633	rnpc3	97	55.488	ENSNGAG00000010939	Rnpc3	95	54.878	Nannospalax_galili
ENSSPAG00000005633	rnpc3	99	83.567	ENSNBRG00000012196	rnpc3	96	84.569	Neolamprologus_brichardi
ENSSPAG00000005633	rnpc3	97	56.415	ENSNLEG00000012013	RNPC3	95	55.804	Nomascus_leucogenys
ENSSPAG00000005633	rnpc3	97	54.183	ENSODEG00000007612	RNPC3	95	54.065	Octodon_degus
ENSSPAG00000005633	rnpc3	99	82.446	ENSONIG00000004770	rnpc3	100	84.426	Oreochromis_niloticus
ENSSPAG00000005633	rnpc3	91	56.652	ENSOANG00000008220	RNPC3	99	57.082	Ornithorhynchus_anatinus
ENSSPAG00000005633	rnpc3	97	56.187	ENSOCUG00000004016	RNPC3	95	55.375	Oryctolagus_cuniculus
ENSSPAG00000005633	rnpc3	100	75.498	ENSORLG00000005694	rnpc3	100	77.490	Oryzias_latipes
ENSSPAG00000005633	rnpc3	100	75.498	ENSORLG00020005513	rnpc3	100	77.490	Oryzias_latipes_hni
ENSSPAG00000005633	rnpc3	100	75.100	ENSORLG00015002179	rnpc3	100	77.092	Oryzias_latipes_hsok
ENSSPAG00000005633	rnpc3	100	75.098	ENSOMEG00000017737	rnpc3	100	78.088	Oryzias_melastigma
ENSSPAG00000005633	rnpc3	97	52.642	ENSOGAG00000026182	RNPC3	95	55.285	Otolemur_garnettii
ENSSPAG00000005633	rnpc3	97	56.504	ENSOARG00000018719	RNPC3	95	55.488	Ovis_aries
ENSSPAG00000005633	rnpc3	97	48.770	ENSPPAG00000030278	-	97	50.816	Pan_paniscus
ENSSPAG00000005633	rnpc3	97	56.389	ENSPPAG00000037459	RNPC3	95	55.781	Pan_paniscus
ENSSPAG00000005633	rnpc3	97	56.187	ENSPPRG00000020246	RNPC3	95	55.578	Panthera_pardus
ENSSPAG00000005633	rnpc3	97	56.187	ENSPTIG00000009887	RNPC3	97	55.578	Panthera_tigris_altaica
ENSSPAG00000005633	rnpc3	97	55.090	ENSPTRG00000033902	RNPC3	95	55.691	Pan_troglodytes
ENSSPAG00000005633	rnpc3	97	48.041	ENSPTRG00000044227	-	97	49.898	Pan_troglodytes
ENSSPAG00000005633	rnpc3	97	45.691	ENSPANG00000029957	-	51	50.820	Papio_anubis
ENSSPAG00000005633	rnpc3	97	56.415	ENSPANG00000012137	RNPC3	95	55.804	Papio_anubis
ENSSPAG00000005633	rnpc3	99	65.873	ENSPKIG00000008828	rnpc3	98	66.468	Paramormyrops_kingsleyae
ENSSPAG00000005633	rnpc3	64	51.190	ENSPSIG00000007396	RNPC3	99	53.823	Pelodiscus_sinensis
ENSSPAG00000005633	rnpc3	99	66.799	ENSPMGG00000011742	rnpc3	100	67.396	Periophthalmus_magnuspinnatus
ENSSPAG00000005633	rnpc3	89	53.880	ENSPEMG00000020112	Rnpc3	99	53.215	Peromyscus_maniculatus_bairdii
ENSSPAG00000005633	rnpc3	95	44.294	ENSPMAG00000003778	rnpc3	50	51.504	Petromyzon_marinus
ENSSPAG00000005633	rnpc3	97	56.735	ENSPCIG00000004415	-	95	56.327	Phascolarctos_cinereus
ENSSPAG00000005633	rnpc3	99	80.119	ENSPFOG00000009895	rnpc3	99	80.318	Poecilia_formosa
ENSSPAG00000005633	rnpc3	99	80.119	ENSPLAG00000012023	rnpc3	99	80.318	Poecilia_latipinna
ENSSPAG00000005633	rnpc3	99	80.318	ENSPMEG00000003663	rnpc3	99	80.517	Poecilia_mexicana
ENSSPAG00000005633	rnpc3	100	79.842	ENSPREG00000010206	rnpc3	100	80.040	Poecilia_reticulata
ENSSPAG00000005633	rnpc3	80	51.582	ENSPPYG00000001102	RNPC3	94	50.852	Pongo_abelii
ENSSPAG00000005633	rnpc3	99	83.567	ENSPNYG00000020603	rnpc3	99	84.569	Pundamilia_nyererei
ENSSPAG00000005633	rnpc3	97	52.259	ENSRNOG00000017310	Rnpc3	95	55.578	Rattus_norvegicus
ENSSPAG00000005633	rnpc3	97	52.535	ENSRBIG00000043897	RNPC3	95	51.927	Rhinopithecus_bieti
ENSSPAG00000005633	rnpc3	97	56.301	ENSRROG00000032334	RNPC3	95	55.691	Rhinopithecus_roxellana
ENSSPAG00000005633	rnpc3	97	56.212	ENSSBOG00000024473	RNPC3	95	55.601	Saimiri_boliviensis_boliviensis
ENSSPAG00000005633	rnpc3	97	54.545	ENSSHAG00000011859	RNPC3	95	49.803	Sarcophilus_harrisii
ENSSPAG00000005633	rnpc3	99	68.862	ENSSFOG00015013055	rnpc3	99	69.610	Scleropages_formosus
ENSSPAG00000005633	rnpc3	100	75.534	ENSSMAG00000020346	rnpc3	100	75.340	Scophthalmus_maximus
ENSSPAG00000005633	rnpc3	100	82.456	ENSSDUG00000006600	rnpc3	100	83.431	Seriola_dumerili
ENSSPAG00000005633	rnpc3	100	83.041	ENSSLDG00000007979	rnpc3	100	83.236	Seriola_lalandi_dorsalis
ENSSPAG00000005633	rnpc3	97	57.055	ENSSSCG00000037254	RNPC3	95	56.237	Sus_scrofa
ENSSPAG00000005633	rnpc3	89	56.347	ENSTGUG00000004795	-	99	56.347	Taeniopygia_guttata
ENSSPAG00000005633	rnpc3	99	76.877	ENSTNIG00000018963	rnpc3	100	75.494	Tetraodon_nigroviridis
ENSSPAG00000005633	rnpc3	97	56.301	ENSUMAG00000007775	RNPC3	97	55.488	Ursus_maritimus
ENSSPAG00000005633	rnpc3	97	56.098	ENSVVUG00000000331	RNPC3	95	55.285	Vulpes_vulpes
ENSSPAG00000005633	rnpc3	96	46.667	ENSXETG00000025027	rnpc3	96	44.643	Xenopus_tropicalis
ENSSPAG00000005633	rnpc3	100	78.978	ENSXCOG00000005013	rnpc3	100	78.978	Xiphophorus_couchianus
ENSSPAG00000005633	rnpc3	100	78.346	ENSXMAG00000006495	rnpc3	100	79.921	Xiphophorus_maculatus