EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000005974 (Gene tree)
Gene ID: 103355615
Gene Symbol: gar1
Alias: nola1|zgc:56086
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 3621 bases
Position: chrKK580231.1:407901-411521
Accession: 103355615
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000007816	Gar1	PF04410.14	2.4e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000007968	-	1442	XM_008279473	ENSSPAP00000007816	228 (aa)	XP_008277695	UPI000495CFAE

Gene Model

Click here to download ENSSPAG00000005974's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000005974's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000005974	gar1	54	88.618	ENSACAG00000010031	GAR1	50	92.453	Anolis_carolinensis
ENSSPAG00000005974	gar1	50	92.920	ENSTSYG00000013668	-	50	94.393	Carlito_syrichta
ENSSPAG00000005974	gar1	51	84.483	ENSTSYG00000026632	-	55	85.981	Carlito_syrichta
ENSSPAG00000005974	gar1	54	91.935	ENSCATG00000021854	GAR1	54	94.393	Cercocebus_atys
ENSSPAG00000005974	gar1	54	94.262	ENSCGRG00000010165	-	92	94.262	Cricetulus_griseus_crigri
ENSSPAG00000005974	gar1	53	93.388	ENSHGLG00000000493	GAR1	72	98.182	Heterocephalus_glaber_female
ENSSPAG00000005974	gar1	52	90.678	ENSSTOG00000005577	GAR1	71	96.364	Ictidomys_tridecemlineatus
ENSSPAG00000005974	gar1	64	85.833	ENSLACG00000003306	GAR1	64	89.623	Latimeria_chalumnae
ENSSPAG00000005974	gar1	50	95.614	ENSMAUG00000016788	Gar1	96	94.805	Mesocricetus_auratus
ENSSPAG00000005974	gar1	50	93.860	ENSMOCG00000001340	Gar1	70	98.182	Microtus_ochrogaster
ENSSPAG00000005974	gar1	50	87.719	ENSMODG00000005897	GAR1	71	92.105	Monodelphis_domestica
ENSSPAG00000005974	gar1	71	86.420	ENSMALG00000009672	gar1	50	95.370	Monopterus_albus
ENSSPAG00000005974	gar1	50	94.737	MGP_CAROLIEiJ_G0025627	Gar1	96	94.805	Mus_caroli
ENSSPAG00000005974	gar1	51	93.162	ENSMUSG00000028010	Gar1	96	94.805	Mus_musculus
ENSSPAG00000005974	gar1	51	93.162	MGP_PahariEiJ_G0027076	Gar1	96	94.805	Mus_pahari
ENSSPAG00000005974	gar1	51	93.162	MGP_SPRETEiJ_G0026580	Gar1	96	94.805	Mus_spretus
ENSSPAG00000005974	gar1	52	91.597	ENSNGAG00000008268	Gar1	71	96.364	Nannospalax_galili
ENSSPAG00000005974	gar1	51	91.453	ENSNLEG00000016578	GAR1	50	94.393	Nomascus_leucogenys
ENSSPAG00000005974	gar1	53	92.562	ENSOCUG00000003901	GAR1	50	94.393	Oryctolagus_cuniculus
ENSSPAG00000005974	gar1	50	92.920	ENSOGAG00000004693	GAR1	50	94.393	Otolemur_garnettii
ENSSPAG00000005974	gar1	54	91.935	ENSPTRG00000016364	GAR1	54	94.393	Pan_troglodytes
ENSSPAG00000005974	gar1	50	95.614	ENSPEMG00000015838	Gar1	96	94.805	Peromyscus_maniculatus_bairdii
ENSSPAG00000005974	gar1	64	87.075	ENSPMEG00000009320	gar1	52	97.222	Poecilia_mexicana
ENSSPAG00000005974	gar1	50	95.614	ENSRNOG00000061146	Gar1	63	96.262	Rattus_norvegicus
ENSSPAG00000005974	gar1	53	93.388	ENSRBIG00000019547	GAR1	54	94.393	Rhinopithecus_bieti
ENSSPAG00000005974	gar1	54	91.935	ENSRROG00000028454	GAR1	54	94.393	Rhinopithecus_roxellana
ENSSPAG00000005974	gar1	64	91.096	ENSSLDG00000023264	gar1	51	99.074	Seriola_lalandi_dorsalis
ENSSPAG00000005974	gar1	63	81.250	ENSSPUG00000008707	GAR1	59	94.340	Sphenodon_punctatus
ENSSPAG00000005974	gar1	78	93.220	ENSTNIG00000013023	gar1	98	93.220	Tetraodon_nigroviridis