EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000006539 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 4885 bases
Position: chrKK580528.1:20046-24930
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000008578	zf-C2H2	PF00096.26	8.9e-34	1	7
ENSSPAP00000008578	zf-C2H2	PF00096.26	8.9e-34	2	7
ENSSPAP00000008578	zf-C2H2	PF00096.26	8.9e-34	3	7
ENSSPAP00000008578	zf-C2H2	PF00096.26	8.9e-34	4	7
ENSSPAP00000008578	zf-C2H2	PF00096.26	8.9e-34	5	7
ENSSPAP00000008578	zf-C2H2	PF00096.26	8.9e-34	6	7
ENSSPAP00000008578	zf-C2H2	PF00096.26	8.9e-34	7	7
ENSSPAP00000008578	zf-met	PF12874.7	1.2e-11	1	3
ENSSPAP00000008578	zf-met	PF12874.7	1.2e-11	2	3
ENSSPAP00000008578	zf-met	PF12874.7	1.2e-11	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000008735	-	771	-	ENSSPAP00000008578	256 (aa)	-	-

Gene Model

Click here to download ENSSPAG00000006539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000006539's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000006539	-	97	38.860	ENSSPAG00000015016	-	93	41.414
ENSSPAG00000006539	-	100	38.554	ENSSPAG00000021401	ZNF319	88	38.554
ENSSPAG00000006539	-	98	42.487	ENSSPAG00000022844	-	81	42.487
ENSSPAG00000006539	-	97	40.724	ENSSPAG00000019245	-	89	43.312
ENSSPAG00000006539	-	88	35.664	ENSSPAG00000022061	snai2	58	35.664
ENSSPAG00000006539	-	95	46.341	ENSSPAG00000021008	-	99	46.939
ENSSPAG00000006539	-	96	40.984	ENSSPAG00000013118	-	58	40.984
ENSSPAG00000006539	-	93	37.908	ENSSPAG00000009140	gfi1ab	54	37.908
ENSSPAG00000006539	-	95	42.396	ENSSPAG00000007231	-	97	38.532
ENSSPAG00000006539	-	99	37.908	ENSSPAG00000005832	-	86	37.908
ENSSPAG00000006539	-	93	39.130	ENSSPAG00000011524	-	68	39.130
ENSSPAG00000006539	-	97	41.827	ENSSPAG00000020960	-	97	42.927
ENSSPAG00000006539	-	97	44.211	ENSSPAG00000012009	-	96	43.125
ENSSPAG00000006539	-	93	37.584	ENSSPAG00000022914	gfi1b	52	37.584
ENSSPAG00000006539	-	97	43.590	ENSSPAG00000000384	-	99	43.889
ENSSPAG00000006539	-	90	41.176	ENSSPAG00000007691	-	80	41.176
ENSSPAG00000006539	-	94	41.837	ENSSPAG00000021653	-	92	41.837
ENSSPAG00000006539	-	97	42.667	ENSSPAG00000007454	-	91	39.560
ENSSPAG00000006539	-	90	38.503	ENSSPAG00000021516	-	87	38.503
ENSSPAG00000006539	-	95	42.534	ENSSPAG00000022041	-	82	42.222
ENSSPAG00000006539	-	88	43.556	ENSSPAG00000001572	-	83	43.541
ENSSPAG00000006539	-	95	37.668	ENSSPAG00000004470	-	70	37.668
ENSSPAG00000006539	-	96	42.308	ENSSPAG00000007403	-	85	51.020
ENSSPAG00000006539	-	95	35.256	ENSSPAG00000007500	znf319b	84	35.256
ENSSPAG00000006539	-	90	43.878	ENSSPAG00000001478	-	94	43.878
ENSSPAG00000006539	-	89	40.217	ENSSPAG00000017093	-	56	40.217
ENSSPAG00000006539	-	86	48.438	ENSSPAG00000008950	-	68	38.776
ENSSPAG00000006539	-	99	38.547	ENSSPAG00000008958	-	89	45.669
ENSSPAG00000006539	-	91	40.000	ENSSPAG00000006208	-	84	40.000
ENSSPAG00000006539	-	100	37.052	ENSSPAG00000021934	-	67	37.052
ENSSPAG00000006539	-	93	43.627	ENSSPAG00000014129	-	95	43.128
ENSSPAG00000006539	-	89	43.605	ENSSPAG00000002850	-	85	43.605
ENSSPAG00000006539	-	95	32.773	ENSSPAG00000014018	scrt2	61	32.773
ENSSPAG00000006539	-	93	40.517	ENSSPAG00000023136	znf526	65	40.517
ENSSPAG00000006539	-	90	40.517	ENSSPAG00000011533	-	78	40.517
ENSSPAG00000006539	-	94	43.719	ENSSPAG00000009653	-	77	43.719
ENSSPAG00000006539	-	84	36.517	ENSSPAG00000021950	-	54	36.517
ENSSPAG00000006539	-	93	37.975	ENSSPAG00000001098	-	56	37.975
ENSSPAG00000006539	-	93	46.154	ENSSPAG00000006832	-	57	46.154
ENSSPAG00000006539	-	95	39.610	ENSSPAG00000005716	-	73	39.796
ENSSPAG00000006539	-	94	41.899	ENSSPAG00000019049	-	90	41.830
ENSSPAG00000006539	-	96	38.798	ENSSPAG00000005690	-	61	39.153
ENSSPAG00000006539	-	90	37.500	ENSSPAG00000011544	-	53	37.500
ENSSPAG00000006539	-	98	40.865	ENSSPAG00000006749	-	93	40.865
ENSSPAG00000006539	-	85	35.821	ENSSPAG00000001700	zgc:171929	76	35.821
ENSSPAG00000006539	-	92	36.628	ENSSPAG00000005402	-	61	36.628
ENSSPAG00000006539	-	79	33.333	ENSSPAG00000021437	-	72	31.176
ENSSPAG00000006539	-	88	38.393	ENSSPAG00000021435	-	92	38.393
ENSSPAG00000006539	-	97	41.667	ENSSPAG00000006148	-	81	41.667
ENSSPAG00000006539	-	87	33.088	ENSSPAG00000002200	scrt1b	55	33.088
ENSSPAG00000006539	-	98	41.781	ENSSPAG00000022865	-	99	40.580
ENSSPAG00000006539	-	95	39.086	ENSSPAG00000004352	-	72	37.611
ENSSPAG00000006539	-	91	36.123	ENSSPAG00000004449	-	80	36.123
ENSSPAG00000006539	-	92	42.169	ENSSPAG00000015809	-	55	42.169
ENSSPAG00000006539	-	88	51.948	ENSSPAG00000000064	-	70	51.948
ENSSPAG00000006539	-	97	38.926	ENSSPAG00000003796	-	66	38.926
ENSSPAG00000006539	-	95	34.818	ENSSPAG00000023063	-	67	34.818
ENSSPAG00000006539	-	97	39.506	ENSSPAG00000013109	si:ch211-241b2.1	68	39.506
ENSSPAG00000006539	-	89	41.256	ENSSPAG00000014689	-	82	41.256
ENSSPAG00000006539	-	94	44.976	ENSSPAG00000014607	-	77	49.153
ENSSPAG00000006539	-	96	41.778	ENSSPAG00000022868	-	85	41.778
ENSSPAG00000006539	-	91	44.928	ENSSPAG00000002681	-	67	44.928
ENSSPAG00000006539	-	97	41.228	ENSSPAG00000008485	-	88	39.706
ENSSPAG00000006539	-	89	43.878	ENSSPAG00000008448	-	58	43.878
ENSSPAG00000006539	-	94	42.478	ENSSPAG00000001447	-	53	42.478
ENSSPAG00000006539	-	91	38.037	ENSSPAG00000015796	-	67	38.037
ENSSPAG00000006539	-	88	40.367	ENSSPAG00000012960	-	81	37.313
ENSSPAG00000006539	-	93	42.683	ENSSPAG00000020771	-	98	39.301
ENSSPAG00000006539	-	96	40.541	ENSSPAG00000008610	-	76	40.541
ENSSPAG00000006539	-	99	42.654	ENSSPAG00000008865	-	93	42.986
ENSSPAG00000006539	-	98	37.607	ENSSPAG00000021928	-	75	37.607
ENSSPAG00000006539	-	99	37.500	ENSSPAG00000005733	-	76	37.500
ENSSPAG00000006539	-	95	38.182	ENSSPAG00000009587	-	99	38.182
ENSSPAG00000006539	-	90	39.506	ENSSPAG00000022219	-	58	39.506
ENSSPAG00000006539	-	96	38.798	ENSSPAG00000004429	-	86	38.798
ENSSPAG00000006539	-	96	38.222	ENSSPAG00000007197	-	84	38.222
ENSSPAG00000006539	-	89	37.736	ENSSPAG00000009426	-	64	37.736
ENSSPAG00000006539	-	89	43.038	ENSSPAG00000009396	-	68	43.038
ENSSPAG00000006539	-	97	36.129	ENSSPAG00000016701	znf646	63	36.129
ENSSPAG00000006539	-	96	39.394	ENSSPAG00000015776	-	80	39.394
ENSSPAG00000006539	-	95	37.778	ENSSPAG00000013866	prdm5	74	37.778
ENSSPAG00000006539	-	95	43.363	ENSSPAG00000002174	-	83	43.363
ENSSPAG00000006539	-	91	31.818	ENSSPAG00000018810	si:dkey-89b17.4	54	31.818
ENSSPAG00000006539	-	95	41.627	ENSSPAG00000021978	-	99	40.826
ENSSPAG00000006539	-	97	42.361	ENSSPAG00000020165	-	98	39.207

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000006539	-	91	40.123	ENSACIG00000000360	si:ch211-241b2.1	92	40.123	Amphilophus_citrinellus
ENSSPAG00000006539	-	88	40.000	ENSACIG00000008886	znf1164	81	40.000	Amphilophus_citrinellus
ENSSPAG00000006539	-	95	38.418	ENSACIG00000007882	-	82	38.418	Amphilophus_citrinellus
ENSSPAG00000006539	-	90	42.029	ENSATEG00000008683	si:ch211-241b2.1	72	42.029	Anabas_testudineus
ENSSPAG00000006539	-	78	38.136	ENSATEG00000008667	-	78	38.136	Anabas_testudineus
ENSSPAG00000006539	-	93	38.462	ENSACLG00000000521	-	93	38.462	Astatotilapia_calliptera
ENSSPAG00000006539	-	97	38.323	ENSACLG00000017449	-	63	38.323	Astatotilapia_calliptera
ENSSPAG00000006539	-	97	43.429	ENSACLG00000024670	-	76	43.429	Astatotilapia_calliptera
ENSSPAG00000006539	-	88	44.712	ENSAMXG00000043291	-	74	44.712	Astyanax_mexicanus
ENSSPAG00000006539	-	86	40.323	ENSAMXG00000041650	-	85	40.323	Astyanax_mexicanus
ENSSPAG00000006539	-	91	41.753	ENSAMXG00000029660	-	50	41.206	Astyanax_mexicanus
ENSSPAG00000006539	-	93	39.362	ENSCSEG00000015585	-	78	39.362	Cynoglossus_semilaevis
ENSSPAG00000006539	-	96	42.268	ENSDARG00000113011	zgc:113102	93	42.268	Danio_rerio
ENSSPAG00000006539	-	95	43.111	ENSDARG00000088507	znf982	78	43.111	Danio_rerio
ENSSPAG00000006539	-	96	43.564	ENSDARG00000099731	CABZ01066719.1	93	43.564	Danio_rerio
ENSSPAG00000006539	-	97	41.333	ENSDARG00000102401	znf1001	93	41.333	Danio_rerio
ENSSPAG00000006539	-	98	41.949	ENSDARG00000103777	znf1001	99	41.949	Danio_rerio
ENSSPAG00000006539	-	97	41.629	ENSDARG00000115857	znf1001	93	41.629	Danio_rerio
ENSSPAG00000006539	-	97	44.828	ENSDARG00000099890	CU207221.2	100	44.828	Danio_rerio
ENSSPAG00000006539	-	98	43.429	ENSDARG00000105074	BX000701.2	90	43.429	Danio_rerio
ENSSPAG00000006539	-	95	40.455	ENSDARG00000105073	CU655961.2	76	40.455	Danio_rerio
ENSSPAG00000006539	-	97	42.929	ENSDARG00000100803	zgc:173517	90	42.929	Danio_rerio
ENSSPAG00000006539	-	96	42.784	ENSDARG00000099172	BX000701.1	84	42.784	Danio_rerio
ENSSPAG00000006539	-	90	43.172	ENSDARG00000116765	zgc:162962	88	43.421	Danio_rerio
ENSSPAG00000006539	-	96	39.823	ENSDARG00000101694	znf1184	82	39.823	Danio_rerio
ENSSPAG00000006539	-	97	42.986	ENSDARG00000053165	zgc:113377	80	42.986	Danio_rerio
ENSSPAG00000006539	-	96	40.083	ENSDARG00000111614	znf1183	89	40.083	Danio_rerio
ENSSPAG00000006539	-	99	42.793	ENSDARG00000097521	si:dkey-111k8.5	91	42.793	Danio_rerio
ENSSPAG00000006539	-	89	43.111	ENSDARG00000105295	LO017784.1	65	43.111	Danio_rerio
ENSSPAG00000006539	-	94	42.564	ENSDARG00000109703	FO834825.1	81	42.564	Danio_rerio
ENSSPAG00000006539	-	95	41.206	ENSDARG00000105056	znf45l	95	41.206	Danio_rerio
ENSSPAG00000006539	-	88	40.183	ENSEBUG00000015073	-	78	38.723	Eptatretus_burgeri
ENSSPAG00000006539	-	97	39.487	ENSFHEG00000018209	-	77	39.487	Fundulus_heteroclitus
ENSSPAG00000006539	-	96	40.500	ENSFHEG00000013152	-	65	40.500	Fundulus_heteroclitus
ENSSPAG00000006539	-	95	42.177	ENSFHEG00000018009	-	51	42.177	Fundulus_heteroclitus
ENSSPAG00000006539	-	93	42.857	ENSHBUG00000018916	-	69	39.855	Haplochromis_burtoni
ENSSPAG00000006539	-	90	38.725	ENSHBUG00000009953	-	53	38.725	Haplochromis_burtoni
ENSSPAG00000006539	-	94	44.444	ENSKMAG00000009563	-	75	44.444	Kryptolebias_marmoratus
ENSSPAG00000006539	-	95	41.176	ENSLBEG00000020461	-	51	41.176	Labrus_bergylta
ENSSPAG00000006539	-	93	39.819	ENSMZEG00005021426	-	78	39.819	Maylandia_zebra
ENSSPAG00000006539	-	96	37.725	ENSMZEG00005025568	-	80	37.725	Maylandia_zebra
ENSSPAG00000006539	-	95	41.143	ENSMZEG00005027793	-	73	41.143	Maylandia_zebra
ENSSPAG00000006539	-	93	42.135	ENSMZEG00005007426	-	73	42.135	Maylandia_zebra
ENSSPAG00000006539	-	97	39.394	ENSMZEG00005027943	-	95	38.235	Maylandia_zebra
ENSSPAG00000006539	-	89	37.162	ENSMZEG00005005162	-	71	41.667	Maylandia_zebra
ENSSPAG00000006539	-	96	40.000	ENSMZEG00005025729	-	88	40.000	Maylandia_zebra
ENSSPAG00000006539	-	96	35.745	ENSMZEG00005022161	-	93	37.762	Maylandia_zebra
ENSSPAG00000006539	-	93	45.455	ENSMZEG00005026470	-	54	45.455	Maylandia_zebra
ENSSPAG00000006539	-	98	32.642	ENSMALG00000008638	-	60	32.642	Monopterus_albus
ENSSPAG00000006539	-	95	37.788	ENSMALG00000018074	-	58	37.788	Monopterus_albus
ENSSPAG00000006539	-	96	41.667	ENSNBRG00000000577	-	80	41.667	Neolamprologus_brichardi
ENSSPAG00000006539	-	91	36.889	ENSONIG00000013908	-	100	36.889	Oreochromis_niloticus
ENSSPAG00000006539	-	99	35.955	ENSONIG00000003363	-	100	35.955	Oreochromis_niloticus
ENSSPAG00000006539	-	90	35.455	ENSONIG00000006585	-	99	35.455	Oreochromis_niloticus
ENSSPAG00000006539	-	93	40.367	ENSORLG00020019341	-	88	58.621	Oryzias_latipes_hni
ENSSPAG00000006539	-	90	38.732	ENSPMGG00000001558	znf1174	55	38.732	Periophthalmus_magnuspinnatus
ENSSPAG00000006539	-	88	47.917	ENSPFOG00000001144	-	100	37.069	Poecilia_formosa
ENSSPAG00000006539	-	100	39.286	ENSPFOG00000011766	-	99	39.286	Poecilia_formosa
ENSSPAG00000006539	-	97	40.984	ENSPLAG00000016561	zgc:113348	92	40.984	Poecilia_latipinna
ENSSPAG00000006539	-	89	41.921	ENSPMEG00000007573	zgc:113343	63	41.921	Poecilia_mexicana
ENSSPAG00000006539	-	91	39.080	ENSPREG00000014105	-	83	34.965	Poecilia_reticulata
ENSSPAG00000006539	-	90	42.358	ENSPREG00000001514	zgc:113343	63	42.358	Poecilia_reticulata
ENSSPAG00000006539	-	93	33.459	ENSPREG00000005538	-	75	33.459	Poecilia_reticulata
ENSSPAG00000006539	-	90	38.235	ENSPNYG00000024183	zgc:173577	99	38.235	Pundamilia_nyererei
ENSSPAG00000006539	-	88	47.500	ENSSDUG00000008682	-	84	47.500	Seriola_dumerili
ENSSPAG00000006539	-	89	41.808	ENSTNIG00000000277	-	93	41.808	Tetraodon_nigroviridis
ENSSPAG00000006539	-	89	41.921	ENSXCOG00000017871	zgc:113343	66	41.921	Xiphophorus_couchianus
ENSSPAG00000006539	-	89	41.921	ENSXMAG00000019923	zgc:113343	69	41.921	Xiphophorus_maculatus