EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000007095 (Gene tree)
Gene ID: 103366231
Gene Symbol: parn
Alias: zgc:56067
Full Name: poly(A)-specific ribonuclease PARN-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 10093 bases
Position: chrKK580991.1:97327-107419
Accession: 103366231
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000009428	RNA_bind	PF08675.11	7.6e-34	1	1
ENSSPAP00000009364	RNA_bind	PF08675.11	9.3e-34	1	1
ENSSPAP00000009428	CAF1	PF04857.20	1.5e-90	1	1
ENSSPAP00000009364	CAF1	PF04857.20	5.1e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000009529	-	3148	XM_008293896	ENSSPAP00000009364	682 (aa)	XP_008292118	UPI000495AD0D
ENSSPAT00000009594	-	1782	-	ENSSPAP00000009428	593 (aa)	-	-

Gene Model

Click here to download ENSSPAG00000007095's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000007095's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000007095	parn	86	74.906	ENSG00000140694	PARN	99	72.125	Homo_sapiens
ENSSPAG00000007095	parn	86	74.206	ENSAMEG00000011208	PARN	91	73.445	Ailuropoda_melanoleuca
ENSSPAG00000007095	parn	98	80.231	ENSACIG00000000619	parn	99	84.507	Amphilophus_citrinellus
ENSSPAG00000007095	parn	100	94.752	ENSAOCG00000003465	parn	100	94.898	Amphiprion_ocellaris
ENSSPAG00000007095	parn	90	82.459	ENSAPEG00000010661	parn	94	97.137	Amphiprion_percula
ENSSPAG00000007095	parn	100	90.073	ENSATEG00000004661	parn	100	90.365	Anabas_testudineus
ENSSPAG00000007095	parn	89	71.892	ENSAPLG00000013914	PARN	99	65.877	Anas_platyrhynchos
ENSSPAG00000007095	parn	86	75.373	ENSACAG00000004973	PARN	89	74.957	Anolis_carolinensis
ENSSPAG00000007095	parn	86	75.094	ENSANAG00000031516	PARN	91	77.966	Aotus_nancymaae
ENSSPAG00000007095	parn	100	89.443	ENSACLG00000004742	parn	100	89.443	Astatotilapia_calliptera
ENSSPAG00000007095	parn	100	73.799	ENSAMXG00000012390	parn	100	73.654	Astyanax_mexicanus
ENSSPAG00000007095	parn	86	70.974	ENSBTAG00000018097	PARN	90	73.295	Bos_taurus
ENSSPAG00000007095	parn	86	75.094	ENSCJAG00000015866	PARN	91	77.966	Callithrix_jacchus
ENSSPAG00000007095	parn	86	73.970	ENSCAFG00000018795	PARN	91	73.514	Canis_familiaris
ENSSPAG00000007095	parn	86	74.345	ENSCAFG00020024126	PARN	91	74.443	Canis_lupus_dingo
ENSSPAG00000007095	parn	86	74.157	ENSCHIG00000018143	PARN	91	73.684	Capra_hircus
ENSSPAG00000007095	parn	75	52.916	ENSCAPG00000007984	PARN	78	52.916	Cavia_aperea
ENSSPAG00000007095	parn	92	69.580	ENSCPOG00000002263	PARN	92	73.142	Cavia_porcellus
ENSSPAG00000007095	parn	86	75.094	ENSCCAG00000030367	PARN	91	77.966	Cebus_capucinus
ENSSPAG00000007095	parn	58	34.722	ENSCATG00000033196	PNLDC1	72	34.722	Cercocebus_atys
ENSSPAG00000007095	parn	86	74.719	ENSCATG00000041368	PARN	95	79.775	Cercocebus_atys
ENSSPAG00000007095	parn	86	74.157	ENSCLAG00000015406	PARN	91	74.533	Chinchilla_lanigera
ENSSPAG00000007095	parn	86	75.094	ENSCSAG00000008142	PARN	91	74.957	Chlorocebus_sabaeus
ENSSPAG00000007095	parn	85	56.121	ENSCHOG00000007014	PARN	91	58.448	Choloepus_hoffmanni
ENSSPAG00000007095	parn	80	71.627	ENSCPBG00000006609	PARN	90	74.953	Chrysemys_picta_bellii
ENSSPAG00000007095	parn	83	40.150	ENSCING00000010142	-	99	42.697	Ciona_intestinalis
ENSSPAG00000007095	parn	86	65.385	ENSCANG00000028849	-	87	77.966	Colobus_angolensis_palliatus
ENSSPAG00000007095	parn	86	72.659	ENSCGRG00001012096	Parn	91	73.621	Cricetulus_griseus_chok1gshd
ENSSPAG00000007095	parn	86	72.659	ENSCGRG00000004939	Parn	91	73.621	Cricetulus_griseus_crigri
ENSSPAG00000007095	parn	100	84.593	ENSCSEG00000002064	parn	100	84.593	Cynoglossus_semilaevis
ENSSPAG00000007095	parn	100	86.550	ENSCVAG00000014848	parn	100	86.550	Cyprinodon_variegatus
ENSSPAG00000007095	parn	100	67.052	ENSDARG00000102634	parn	100	67.294	Danio_rerio
ENSSPAG00000007095	parn	86	74.157	ENSDNOG00000000833	PARN	96	77.413	Dasypus_novemcinctus
ENSSPAG00000007095	parn	67	71.212	ENSETEG00000014828	-	69	76.136	Echinops_telfairi
ENSSPAG00000007095	parn	55	50.898	ENSEBUG00000007052	PARN	100	50.898	Eptatretus_burgeri
ENSSPAG00000007095	parn	100	65.985	ENSEASG00005011400	PARN	100	65.985	Equus_asinus_asinus
ENSSPAG00000007095	parn	100	65.839	ENSECAG00000017792	PARN	100	65.839	Equus_caballus
ENSSPAG00000007095	parn	78	81.481	ENSEEUG00000010370	PARN	78	65.315	Erinaceus_europaeus
ENSSPAG00000007095	parn	100	76.556	ENSELUG00000013139	parn	90	76.522	Esox_lucius
ENSSPAG00000007095	parn	86	74.532	ENSFCAG00000044961	PARN	91	74.194	Felis_catus
ENSSPAG00000007095	parn	89	71.661	ENSFALG00000003911	PARN	90	73.883	Ficedula_albicollis
ENSSPAG00000007095	parn	89	72.313	ENSFDAG00000009234	PARN	90	75.087	Fukomys_damarensis
ENSSPAG00000007095	parn	87	82.185	ENSFHEG00000013738	parn	92	91.525	Fundulus_heteroclitus
ENSSPAG00000007095	parn	89	80.510	ENSGMOG00000003231	parn	99	85.818	Gadus_morhua
ENSSPAG00000007095	parn	100	65.987	ENSGALG00000003091	PARN	99	70.952	Gallus_gallus
ENSSPAG00000007095	parn	100	85.153	ENSGAFG00000011061	parn	100	84.571	Gambusia_affinis
ENSSPAG00000007095	parn	100	77.457	ENSGACG00000019501	parn	100	77.312	Gasterosteus_aculeatus
ENSSPAG00000007095	parn	86	74.906	ENSGGOG00000025224	PARN	91	77.966	Gorilla_gorilla
ENSSPAG00000007095	parn	100	90.323	ENSHBUG00000017906	parn	100	90.323	Haplochromis_burtoni
ENSSPAG00000007095	parn	91	70.720	ENSHGLG00000010886	PARN	94	70.720	Heterocephalus_glaber_female
ENSSPAG00000007095	parn	91	70.720	ENSHGLG00100014659	PARN	94	70.720	Heterocephalus_glaber_male
ENSSPAG00000007095	parn	99	72.295	ENSHCOG00000008683	parn	99	81.250	Hippocampus_comes
ENSSPAG00000007095	parn	100	62.936	ENSIPUG00000012401	parn	100	63.135	Ictalurus_punctatus
ENSSPAG00000007095	parn	89	71.818	ENSSTOG00000007519	PARN	91	74.221	Ictidomys_tridecemlineatus
ENSSPAG00000007095	parn	86	73.408	ENSJJAG00000023049	Parn	99	68.545	Jaculus_jaculus
ENSSPAG00000007095	parn	100	88.450	ENSKMAG00000009462	parn	100	88.450	Kryptolebias_marmoratus
ENSSPAG00000007095	parn	93	89.498	ENSLBEG00000009167	parn	100	89.498	Labrus_bergylta
ENSSPAG00000007095	parn	81	72.024	ENSLACG00000004207	PARN	100	75.708	Latimeria_chalumnae
ENSSPAG00000007095	parn	100	72.029	ENSLOCG00000000715	parn	100	71.884	Lepisosteus_oculatus
ENSSPAG00000007095	parn	92	70.973	ENSLAFG00000015036	PARN	91	74.786	Loxodonta_africana
ENSSPAG00000007095	parn	86	72.023	ENSMFAG00000044852	PARN	88	77.966	Macaca_fascicularis
ENSSPAG00000007095	parn	86	74.906	ENSMMUG00000018849	PARN	88	77.966	Macaca_mulatta
ENSSPAG00000007095	parn	86	75.094	ENSMNEG00000045108	PARN	88	77.966	Macaca_nemestrina
ENSSPAG00000007095	parn	86	74.906	ENSMLEG00000031743	PARN	88	77.966	Mandrillus_leucophaeus
ENSSPAG00000007095	parn	100	90.247	ENSMAMG00000006939	parn	100	90.247	Mastacembelus_armatus
ENSSPAG00000007095	parn	100	89.589	ENSMZEG00005013590	parn	100	89.589	Maylandia_zebra
ENSSPAG00000007095	parn	96	64.715	ENSMGAG00000001004	PARN	90	72.474	Meleagris_gallopavo
ENSSPAG00000007095	parn	86	67.035	ENSMAUG00000008025	Parn	91	68.889	Mesocricetus_auratus
ENSSPAG00000007095	parn	89	73.042	ENSMICG00000016053	PARN	91	76.271	Microcebus_murinus
ENSSPAG00000007095	parn	80	74.545	ENSMOCG00000022211	Parn	100	79.798	Microtus_ochrogaster
ENSSPAG00000007095	parn	100	85.092	ENSMMOG00000011333	parn	100	85.092	Mola_mola
ENSSPAG00000007095	parn	80	76.056	ENSMODG00000004915	PARN	99	81.690	Monodelphis_domestica
ENSSPAG00000007095	parn	96	90.868	ENSMALG00000019426	parn	94	94.224	Monopterus_albus
ENSSPAG00000007095	parn	92	69.381	MGP_CAROLIEiJ_G0020466	Parn	91	73.010	Mus_caroli
ENSSPAG00000007095	parn	92	69.381	ENSMUSG00000022685	Parn	100	76.829	Mus_musculus
ENSSPAG00000007095	parn	89	70.674	MGP_PahariEiJ_G0016172	Parn	86	75.228	Mus_pahari
ENSSPAG00000007095	parn	89	69.627	MGP_SPRETEiJ_G0021361	Parn	91	72.759	Mus_spretus
ENSSPAG00000007095	parn	89	73.042	ENSMPUG00000014464	PARN	100	66.228	Mustela_putorius_furo
ENSSPAG00000007095	parn	80	74.545	ENSMLUG00000005414	PARN	100	80.202	Myotis_lucifugus
ENSSPAG00000007095	parn	100	80.725	ENSNBRG00000006805	parn	93	91.273	Neolamprologus_brichardi
ENSSPAG00000007095	parn	86	75.094	ENSNLEG00000010241	PARN	91	77.966	Nomascus_leucogenys
ENSSPAG00000007095	parn	77	65.574	ENSMEUG00000008178	-	74	65.574	Notamacropus_eugenii
ENSSPAG00000007095	parn	88	68.022	ENSOPRG00000012187	PARN	91	69.965	Ochotona_princeps
ENSSPAG00000007095	parn	86	68.173	ENSODEG00000001617	PARN	91	68.870	Octodon_degus
ENSSPAG00000007095	parn	100	90.762	ENSONIG00000000151	parn	100	90.762	Oreochromis_niloticus
ENSSPAG00000007095	parn	50	74.667	ENSOANG00000020155	-	97	63.421	Ornithorhynchus_anatinus
ENSSPAG00000007095	parn	94	68.037	ENSOCUG00000000322	PARN	99	68.541	Oryctolagus_cuniculus
ENSSPAG00000007095	parn	100	83.041	ENSORLG00020010313	parn	100	83.333	Oryzias_latipes_hni
ENSSPAG00000007095	parn	100	82.895	ENSORLG00015000300	parn	100	83.187	Oryzias_latipes_hsok
ENSSPAG00000007095	parn	100	82.482	ENSOMEG00000019555	parn	100	82.482	Oryzias_melastigma
ENSSPAG00000007095	parn	80	74.597	ENSOGAG00000014626	PARN	100	79.839	Otolemur_garnettii
ENSSPAG00000007095	parn	80	75.556	ENSOARG00000007574	PARN	100	81.010	Ovis_aries
ENSSPAG00000007095	parn	86	74.719	ENSPPAG00000031438	PARN	91	77.966	Pan_paniscus
ENSSPAG00000007095	parn	86	74.532	ENSPPRG00000018583	PARN	91	74.194	Panthera_pardus
ENSSPAG00000007095	parn	86	74.532	ENSPTIG00000012135	PARN	91	74.194	Panthera_tigris_altaica
ENSSPAG00000007095	parn	86	74.719	ENSPTRG00000007792	PARN	91	77.966	Pan_troglodytes
ENSSPAG00000007095	parn	86	72.285	ENSPANG00000020099	PARN	88	77.966	Papio_anubis
ENSSPAG00000007095	parn	99	70.714	ENSPKIG00000022807	parn	95	72.536	Paramormyrops_kingsleyae
ENSSPAG00000007095	parn	90	72.389	ENSPSIG00000014804	PARN	91	75.170	Pelodiscus_sinensis
ENSSPAG00000007095	parn	90	79.383	ENSPMGG00000014431	parn	85	79.870	Periophthalmus_magnuspinnatus
ENSSPAG00000007095	parn	89	68.638	ENSPEMG00000018439	Parn	91	72.021	Peromyscus_maniculatus_bairdii
ENSSPAG00000007095	parn	87	63.755	ENSPMAG00000003956	parn	99	68.030	Petromyzon_marinus
ENSSPAG00000007095	parn	62	73.364	ENSPCIG00000001259	PARN	91	77.966	Phascolarctos_cinereus
ENSSPAG00000007095	parn	100	85.547	ENSPFOG00000012823	parn	100	85.547	Poecilia_formosa
ENSSPAG00000007095	parn	100	85.693	ENSPLAG00000006395	parn	100	85.693	Poecilia_latipinna
ENSSPAG00000007095	parn	100	85.401	ENSPMEG00000007711	parn	100	85.401	Poecilia_mexicana
ENSSPAG00000007095	parn	100	85.547	ENSPREG00000000147	parn	100	85.547	Poecilia_reticulata
ENSSPAG00000007095	parn	86	74.254	ENSPPYG00000007123	PARN	91	74.194	Pongo_abelii
ENSSPAG00000007095	parn	83	62.791	ENSPCAG00000001741	PARN	90	65.091	Procavia_capensis
ENSSPAG00000007095	parn	89	70.128	ENSPCOG00000019292	PARN	91	76.271	Propithecus_coquereli
ENSSPAG00000007095	parn	85	71.917	ENSPVAG00000002547	PARN	91	72.348	Pteropus_vampyrus
ENSSPAG00000007095	parn	100	90.029	ENSPNYG00000006835	parn	100	90.029	Pundamilia_nyererei
ENSSPAG00000007095	parn	93	71.763	ENSPNAG00000018905	parn	100	71.607	Pygocentrus_nattereri
ENSSPAG00000007095	parn	92	69.258	ENSRNOG00000002912	Parn	96	78.571	Rattus_norvegicus
ENSSPAG00000007095	parn	86	75.432	ENSSBOG00000034726	PARN	88	77.966	Saimiri_boliviensis_boliviensis
ENSSPAG00000007095	parn	61	80.383	ENSSHAG00000008493	PARN	93	80.383	Sarcophilus_harrisii
ENSSPAG00000007095	parn	100	72.143	ENSSFOG00015014165	parn	98	76.589	Scleropages_formosus
ENSSPAG00000007095	parn	100	86.266	ENSSMAG00000000685	parn	100	86.695	Scophthalmus_maximus
ENSSPAG00000007095	parn	100	91.557	ENSSDUG00000014555	parn	100	91.849	Seriola_dumerili
ENSSPAG00000007095	parn	64	81.609	ENSSARG00000014339	PARN	75	81.609	Sorex_araneus
ENSSPAG00000007095	parn	90	71.836	ENSSPUG00000007719	PARN	100	65.576	Sphenodon_punctatus
ENSSPAG00000007095	parn	100	65.066	ENSSSCG00000007878	PARN	89	64.613	Sus_scrofa
ENSSPAG00000007095	parn	89	71.712	ENSTGUG00000004971	PARN	91	73.928	Taeniopygia_guttata
ENSSPAG00000007095	parn	100	79.245	ENSTNIG00000008252	parn	100	79.565	Tetraodon_nigroviridis
ENSSPAG00000007095	parn	76	64.059	ENSTBEG00000010407	PARN	90	61.914	Tupaia_belangeri
ENSSPAG00000007095	parn	83	70.345	ENSTTRG00000002843	PARN	91	70.345	Tursiops_truncatus
ENSSPAG00000007095	parn	78	61.491	ENSUAMG00000008283	PARN	100	66.393	Ursus_americanus
ENSSPAG00000007095	parn	86	74.719	ENSUMAG00000004527	PARN	91	73.737	Ursus_maritimus
ENSSPAG00000007095	parn	85	71.157	ENSVPAG00000008968	PARN	93	71.848	Vicugna_pacos
ENSSPAG00000007095	parn	86	74.345	ENSVVUG00000019509	PARN	91	73.854	Vulpes_vulpes
ENSSPAG00000007095	parn	100	63.736	ENSXETG00000010994	parn	100	77.083	Xenopus_tropicalis
ENSSPAG00000007095	parn	89	82.278	ENSXCOG00000015990	parn	99	83.670	Xiphophorus_couchianus
ENSSPAG00000007095	parn	100	84.526	ENSXMAG00000014783	parn	100	84.380	Xiphophorus_maculatus