EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000007358 (Gene tree)
Gene ID: 103373079
Gene Symbol: tomm20a
Alias: arid4b|ch1073-321c8.1|wu:fk47b11
Full Name: AT-rich interaction domain 4B
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 44672 bases
Position: chrKK580072.1:1524258-1568929
Accession: 103373079
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000009653	Tudor-knot	PF11717.8	2.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000009874	-	6696	XM_008303145	ENSSPAP00000009699	1241 (aa)	XP_008301367	UPI0004961B9F
ENSSPAT00000009824	-	6879	XM_008302922	ENSSPAP00000009653	1302 (aa)	XP_008301144	UPI000496EDF9

Gene Model

Click here to download ENSSPAG00000007358's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000007358's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000007358	tomm20a	67	75.485	ENSG00000054267	ARID4B	94	70.022	Homo_sapiens
ENSSPAG00000007358	tomm20a	100	95.785	ENSAPOG00000010823	tomm20a	100	95.785	Acanthochromis_polyacanthus
ENSSPAG00000007358	tomm20a	92	93.144	ENSACIG00000006313	tomm20a	100	93.144	Amphilophus_citrinellus
ENSSPAG00000007358	tomm20a	100	95.709	ENSAOCG00000003330	tomm20a	100	95.709	Amphiprion_ocellaris
ENSSPAG00000007358	tomm20a	100	95.632	ENSAPEG00000024018	tomm20a	100	95.632	Amphiprion_percula
ENSSPAG00000007358	tomm20a	100	89.763	ENSATEG00000014930	tomm20a	100	89.687	Anabas_testudineus
ENSSPAG00000007358	tomm20a	52	61.354	ENSACAG00000001289	ARID4B	99	51.923	Anolis_carolinensis
ENSSPAG00000007358	tomm20a	53	60.573	ENSANAG00000038088	ARID4B	99	51.895	Aotus_nancymaae
ENSSPAG00000007358	tomm20a	92	84.291	ENSACLG00000023521	tomm20a	99	84.802	Astatotilapia_calliptera
ENSSPAG00000007358	tomm20a	83	77.724	ENSAMXG00000003657	tomm20a	91	77.482	Astyanax_mexicanus
ENSSPAG00000007358	tomm20a	53	60.268	ENSBTAG00000000222	ARID4B	99	51.594	Bos_taurus
ENSSPAG00000007358	tomm20a	53	61.141	ENSCAFG00000011439	ARID4B	99	52.353	Canis_familiaris
ENSSPAG00000007358	tomm20a	52	60.577	ENSCAFG00020027130	ARID4B	99	52.003	Canis_lupus_dingo
ENSSPAG00000007358	tomm20a	99	50.145	ENSCHIG00000020742	ARID4B	99	49.927	Capra_hircus
ENSSPAG00000007358	tomm20a	53	60.544	ENSTSYG00000010028	ARID4B	54	61.050	Carlito_syrichta
ENSSPAG00000007358	tomm20a	99	50.722	ENSCPOG00000034766	ARID4B	99	51.603	Cavia_porcellus
ENSSPAG00000007358	tomm20a	53	60.109	ENSCCAG00000021520	ARID4B	99	51.825	Cebus_capucinus
ENSSPAG00000007358	tomm20a	53	59.946	ENSCATG00000042166	ARID4B	99	51.927	Cercocebus_atys
ENSSPAG00000007358	tomm20a	100	52.196	ENSCLAG00000003255	ARID4B	99	52.924	Chinchilla_lanigera
ENSSPAG00000007358	tomm20a	100	51.555	ENSCPBG00000004501	ARID4B	99	51.727	Chrysemys_picta_bellii
ENSSPAG00000007358	tomm20a	100	52.152	ENSCGRG00001014397	Arid4b	99	52.582	Cricetulus_griseus_chok1gshd
ENSSPAG00000007358	tomm20a	99	52.121	ENSCGRG00000004910	Arid4b	99	52.551	Cricetulus_griseus_crigri
ENSSPAG00000007358	tomm20a	99	83.579	ENSCSEG00000012928	tomm20a	99	84.043	Cynoglossus_semilaevis
ENSSPAG00000007358	tomm20a	100	82.555	ENSCVAG00000003244	tomm20a	100	83.321	Cyprinodon_variegatus
ENSSPAG00000007358	tomm20a	100	65.099	ENSDARG00000090656	tomm20a	99	66.178	Danio_rerio
ENSSPAG00000007358	tomm20a	99	51.546	ENSDORG00000006422	Arid4b	99	52.032	Dipodomys_ordii
ENSSPAG00000007358	tomm20a	88	63.271	ENSETEG00000005596	ARID4B	88	62.735	Echinops_telfairi
ENSSPAG00000007358	tomm20a	64	57.322	ENSELUG00000018441	tomm20a	91	56.174	Esox_lucius
ENSSPAG00000007358	tomm20a	54	60.852	ENSFCAG00000030096	ARID4B	99	52.655	Felis_catus
ENSSPAG00000007358	tomm20a	99	51.772	ENSFDAG00000014194	ARID4B	99	53.045	Fukomys_damarensis
ENSSPAG00000007358	tomm20a	100	83.650	ENSFHEG00000003798	tomm20a	100	83.498	Fundulus_heteroclitus
ENSSPAG00000007358	tomm20a	90	74.902	ENSGMOG00000018747	tomm20a	91	74.902	Gadus_morhua
ENSSPAG00000007358	tomm20a	99	82.018	ENSGACG00000004298	tomm20a	100	81.866	Gasterosteus_aculeatus
ENSSPAG00000007358	tomm20a	100	51.379	ENSGAGG00000020544	ARID4B	97	51.979	Gopherus_agassizii
ENSSPAG00000007358	tomm20a	100	88.821	ENSHBUG00000020369	tomm20a	100	89.204	Haplochromis_burtoni
ENSSPAG00000007358	tomm20a	100	51.846	ENSHGLG00000012546	ARID4B	99	53.079	Heterocephalus_glaber_female
ENSSPAG00000007358	tomm20a	100	51.846	ENSHGLG00100015436	ARID4B	99	53.079	Heterocephalus_glaber_male
ENSSPAG00000007358	tomm20a	95	84.934	ENSHCOG00000010376	tomm20a	100	84.279	Hippocampus_comes
ENSSPAG00000007358	tomm20a	100	64.269	ENSIPUG00000014234	arid4b	99	64.467	Ictalurus_punctatus
ENSSPAG00000007358	tomm20a	92	77.440	ENSKMAG00000010987	tomm20a	98	78.998	Kryptolebias_marmoratus
ENSSPAG00000007358	tomm20a	100	60.666	ENSLOCG00000015899	tomm20a	99	62.376	Lepisosteus_oculatus
ENSSPAG00000007358	tomm20a	53	60.411	ENSLAFG00000014295	ARID4B	99	52.321	Loxodonta_africana
ENSSPAG00000007358	tomm20a	93	89.556	ENSMAMG00000017134	tomm20a	99	89.678	Mastacembelus_armatus
ENSSPAG00000007358	tomm20a	100	88.668	ENSMZEG00005009879	tomm20a	100	89.051	Maylandia_zebra
ENSSPAG00000007358	tomm20a	54	59.733	ENSMGAG00000011896	ARID4B	99	51.462	Meleagris_gallopavo
ENSSPAG00000007358	tomm20a	53	62.396	ENSMICG00000016358	ARID4B	99	52.577	Microcebus_murinus
ENSSPAG00000007358	tomm20a	93	89.254	ENSMMOG00000000561	tomm20a	98	88.158	Mola_mola
ENSSPAG00000007358	tomm20a	100	50.387	ENSMODG00000008417	ARID4B	99	50.935	Monodelphis_domestica
ENSSPAG00000007358	tomm20a	100	89.417	ENSMALG00000005205	tomm20a	100	89.877	Monopterus_albus
ENSSPAG00000007358	tomm20a	100	52.292	ENSNGAG00000014629	Arid4b	99	52.701	Nannospalax_galili
ENSSPAG00000007358	tomm20a	92	88.863	ENSNBRG00000019684	tomm20a	99	91.706	Neolamprologus_brichardi
ENSSPAG00000007358	tomm20a	100	52.055	ENSODEG00000005373	ARID4B	99	53.270	Octodon_degus
ENSSPAG00000007358	tomm20a	53	60.976	ENSOCUG00000006605	ARID4B	99	51.798	Oryctolagus_cuniculus
ENSSPAG00000007358	tomm20a	100	80.383	ENSORLG00000012510	tomm20a	100	79.893	Oryzias_latipes
ENSSPAG00000007358	tomm20a	92	85.472	ENSORLG00020013988	tomm20a	99	87.651	Oryzias_latipes_hni
ENSSPAG00000007358	tomm20a	92	86.131	ENSORLG00015022835	tomm20a	99	87.835	Oryzias_latipes_hsok
ENSSPAG00000007358	tomm20a	100	81.379	ENSOMEG00000000521	tomm20a	100	80.778	Oryzias_melastigma
ENSSPAG00000007358	tomm20a	99	51.639	ENSOARG00000003481	ARID4B	97	51.453	Ovis_aries
ENSSPAG00000007358	tomm20a	54	60.904	ENSPPRG00000013739	ARID4B	99	52.582	Panthera_pardus
ENSSPAG00000007358	tomm20a	54	60.904	ENSPTIG00000012520	ARID4B	99	52.694	Panthera_tigris_altaica
ENSSPAG00000007358	tomm20a	93	49.088	ENSPSIG00000011632	ARID4B	99	49.573	Pelodiscus_sinensis
ENSSPAG00000007358	tomm20a	52	80.451	ENSPMGG00000001596	tomm20a	89	80.451	Periophthalmus_magnuspinnatus
ENSSPAG00000007358	tomm20a	100	51.497	ENSPCIG00000029756	ARID4B	99	51.591	Phascolarctos_cinereus
ENSSPAG00000007358	tomm20a	100	83.954	ENSPFOG00000019430	tomm20a	100	84.867	Poecilia_formosa
ENSSPAG00000007358	tomm20a	100	83.802	ENSPLAG00000010554	tomm20a	100	84.715	Poecilia_latipinna
ENSSPAG00000007358	tomm20a	100	81.832	ENSPMEG00000003093	tomm20a	100	79.006	Poecilia_mexicana
ENSSPAG00000007358	tomm20a	100	83.155	ENSPREG00000007996	tomm20a	100	84.375	Poecilia_reticulata
ENSSPAG00000007358	tomm20a	100	51.013	ENSPVAG00000015159	ARID4B	99	51.014	Pteropus_vampyrus
ENSSPAG00000007358	tomm20a	99	82.745	ENSPNYG00000013988	tomm20a	100	82.669	Pundamilia_nyererei
ENSSPAG00000007358	tomm20a	100	67.696	ENSPNAG00000000523	tomm20a	92	67.762	Pygocentrus_nattereri
ENSSPAG00000007358	tomm20a	66	73.153	ENSRBIG00000042029	ARID4B	96	49.064	Rhinopithecus_bieti
ENSSPAG00000007358	tomm20a	53	60.569	ENSSHAG00000015214	ARID4B	99	50.976	Sarcophilus_harrisii
ENSSPAG00000007358	tomm20a	100	60.939	ENSSFOG00015000132	arid4b	99	62.021	Scleropages_formosus
ENSSPAG00000007358	tomm20a	76	51.290	ENSSFOG00015008923	tomm20a	98	52.893	Scleropages_formosus
ENSSPAG00000007358	tomm20a	100	87.087	ENSSMAG00000010430	tomm20a	100	87.988	Scophthalmus_maximus
ENSSPAG00000007358	tomm20a	100	93.482	ENSSDUG00000003019	tomm20a	100	93.252	Seriola_dumerili
ENSSPAG00000007358	tomm20a	69	74.587	ENSTRUG00000002893	tomm20a	100	74.945	Takifugu_rubripes
ENSSPAG00000007358	tomm20a	70	69.287	ENSTBEG00000003961	ARID4B	67	68.796	Tupaia_belangeri
ENSSPAG00000007358	tomm20a	100	51.791	ENSTTRG00000002228	ARID4B	99	51.197	Tursiops_truncatus
ENSSPAG00000007358	tomm20a	68	59.285	ENSVPAG00000006841	ARID4B	68	59.091	Vicugna_pacos
ENSSPAG00000007358	tomm20a	52	58.750	ENSVVUG00000008154	ARID4B	98	51.399	Vulpes_vulpes
ENSSPAG00000007358	tomm20a	100	49.854	ENSXETG00000024651	arid4b	89	59.192	Xenopus_tropicalis
ENSSPAG00000007358	tomm20a	100	84.456	ENSXMAG00000006538	tomm20a	100	85.145	Xiphophorus_maculatus