EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000007484 (Gene tree)
Gene ID: 103360680
Gene Symbol: usb1
Alias: zgc:91896
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 6173 bases
Position: chrKK580529.1:331880-338052
Accession: 103360680
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000009820	HVSL	PF09749.9	1.5e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000009996	-	1449	XM_008286530	ENSSPAP00000009820	284 (aa)	XP_008284752	UPI00049714F2

Gene Model

Click here to download ENSSPAG00000007484's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000007484's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000007484	usb1	80	51.542	ENSG00000103005	USB1	100	51.869	Homo_sapiens
ENSSPAG00000007484	usb1	99	81.272	ENSAPOG00000011942	usb1	99	81.272	Acanthochromis_polyacanthus
ENSSPAG00000007484	usb1	82	51.931	ENSAMEG00000017205	USB1	98	47.719	Ailuropoda_melanoleuca
ENSSPAG00000007484	usb1	99	70.423	ENSACIG00000012234	usb1	99	70.423	Amphilophus_citrinellus
ENSSPAG00000007484	usb1	100	85.211	ENSAOCG00000014831	usb1	100	85.211	Amphiprion_ocellaris
ENSSPAG00000007484	usb1	100	84.859	ENSAPEG00000000296	usb1	100	84.859	Amphiprion_percula
ENSSPAG00000007484	usb1	100	76.056	ENSATEG00000009348	usb1	100	75.352	Anabas_testudineus
ENSSPAG00000007484	usb1	78	55.111	ENSAPLG00000002756	USB1	99	55.556	Anas_platyrhynchos
ENSSPAG00000007484	usb1	79	50.877	ENSACAG00000015481	USB1	99	50.877	Anolis_carolinensis
ENSSPAG00000007484	usb1	80	51.101	ENSANAG00000035640	USB1	86	51.101	Aotus_nancymaae
ENSSPAG00000007484	usb1	99	73.427	ENSACLG00000020586	usb1	99	75.175	Astatotilapia_calliptera
ENSSPAG00000007484	usb1	79	63.839	ENSAMXG00000040146	usb1	74	63.839	Astyanax_mexicanus
ENSSPAG00000007484	usb1	99	46.181	ENSBTAG00000015758	USB1	98	46.181	Bos_taurus
ENSSPAG00000007484	usb1	99	46.290	ENSCJAG00000011733	USB1	86	52.423	Callithrix_jacchus
ENSSPAG00000007484	usb1	81	51.293	ENSCAFG00000008556	USB1	71	47.350	Canis_familiaris
ENSSPAG00000007484	usb1	88	47.860	ENSCAFG00020009263	USB1	85	52.655	Canis_lupus_dingo
ENSSPAG00000007484	usb1	99	45.936	ENSCHIG00000024290	USB1	98	45.833	Capra_hircus
ENSSPAG00000007484	usb1	80	50.661	ENSTSYG00000006997	USB1	98	45.230	Carlito_syrichta
ENSSPAG00000007484	usb1	79	42.411	ENSCAPG00000009057	USB1	96	42.411	Cavia_aperea
ENSSPAG00000007484	usb1	99	48.057	ENSCPOG00000014325	USB1	98	46.996	Cavia_porcellus
ENSSPAG00000007484	usb1	80	51.982	ENSCCAG00000022132	USB1	86	51.982	Cebus_capucinus
ENSSPAG00000007484	usb1	80	52.423	ENSCATG00000032174	USB1	98	46.528	Cercocebus_atys
ENSSPAG00000007484	usb1	61	52.601	ENSCLAG00000007363	USB1	87	54.248	Chinchilla_lanigera
ENSSPAG00000007484	usb1	80	51.982	ENSCSAG00000004783	USB1	98	46.181	Chlorocebus_sabaeus
ENSSPAG00000007484	usb1	81	54.978	ENSCPBG00000026943	USB1	98	51.773	Chrysemys_picta_bellii
ENSSPAG00000007484	usb1	79	31.489	ENSCING00000011490	-	87	31.197	Ciona_intestinalis
ENSSPAG00000007484	usb1	79	52.655	ENSCANG00000037135	USB1	97	46.875	Colobus_angolensis_palliatus
ENSSPAG00000007484	usb1	99	48.763	ENSCGRG00001011243	USB1	98	46.996	Cricetulus_griseus_chok1gshd
ENSSPAG00000007484	usb1	99	48.763	ENSCGRG00000013252	USB1	98	46.996	Cricetulus_griseus_crigri
ENSSPAG00000007484	usb1	100	67.254	ENSCSEG00000013881	usb1	99	65.845	Cynoglossus_semilaevis
ENSSPAG00000007484	usb1	79	74.123	ENSCVAG00000009252	usb1	98	74.123	Cyprinodon_variegatus
ENSSPAG00000007484	usb1	85	59.336	ENSDARG00000003841	usb1	100	54.225	Danio_rerio
ENSSPAG00000007484	usb1	83	49.153	ENSDORG00000001888	Usb1	98	46.479	Dipodomys_ordii
ENSSPAG00000007484	usb1	74	39.815	FBgn0037713	CG16790	81	38.967	Drosophila_melanogaster
ENSSPAG00000007484	usb1	99	40.070	ENSETEG00000019682	USB1	98	39.929	Echinops_telfairi
ENSSPAG00000007484	usb1	84	43.529	ENSEBUG00000005889	usb1	98	40.584	Eptatretus_burgeri
ENSSPAG00000007484	usb1	99	45.936	ENSEASG00005005484	USB1	98	45.936	Equus_asinus_asinus
ENSSPAG00000007484	usb1	99	45.583	ENSECAG00000019493	USB1	89	45.745	Equus_caballus
ENSSPAG00000007484	usb1	61	48.555	ENSEEUG00000000154	USB1	58	49.020	Erinaceus_europaeus
ENSSPAG00000007484	usb1	83	64.135	ENSELUG00000010974	usb1	99	58.099	Esox_lucius
ENSSPAG00000007484	usb1	82	50.644	ENSFCAG00000002693	USB1	98	46.479	Felis_catus
ENSSPAG00000007484	usb1	99	46.316	ENSFALG00000006876	USB1	98	46.316	Ficedula_albicollis
ENSSPAG00000007484	usb1	99	47.703	ENSFDAG00000010052	USB1	98	45.583	Fukomys_damarensis
ENSSPAG00000007484	usb1	88	67.589	ENSFHEG00000012334	usb1	98	67.984	Fundulus_heteroclitus
ENSSPAG00000007484	usb1	78	71.622	ENSGMOG00000004228	usb1	99	71.622	Gadus_morhua
ENSSPAG00000007484	usb1	89	50.787	ENSGALG00000035604	USB1	98	47.703	Gallus_gallus
ENSSPAG00000007484	usb1	99	72.535	ENSGAFG00000021890	usb1	99	72.535	Gambusia_affinis
ENSSPAG00000007484	usb1	87	73.387	ENSGACG00000003257	usb1	100	69.014	Gasterosteus_aculeatus
ENSSPAG00000007484	usb1	99	52.128	ENSGAGG00000022572	USB1	98	51.773	Gopherus_agassizii
ENSSPAG00000007484	usb1	80	51.982	ENSGGOG00000017147	USB1	86	51.982	Gorilla_gorilla
ENSSPAG00000007484	usb1	99	74.386	ENSHBUG00000009823	usb1	99	75.789	Haplochromis_burtoni
ENSSPAG00000007484	usb1	99	46.454	ENSHGLG00000016078	USB1	96	45.390	Heterocephalus_glaber_female
ENSSPAG00000007484	usb1	99	46.454	ENSHGLG00100005562	USB1	96	45.390	Heterocephalus_glaber_male
ENSSPAG00000007484	usb1	77	73.394	ENSHCOG00000015633	usb1	99	63.732	Hippocampus_comes
ENSSPAG00000007484	usb1	99	53.265	ENSIPUG00000008601	usb1	100	53.265	Ictalurus_punctatus
ENSSPAG00000007484	usb1	80	52.423	ENSSTOG00000007548	USB1	98	47.719	Ictidomys_tridecemlineatus
ENSSPAG00000007484	usb1	99	48.057	ENSJJAG00000021859	Usb1	98	46.290	Jaculus_jaculus
ENSSPAG00000007484	usb1	85	78.838	ENSKMAG00000007200	usb1	99	71.088	Kryptolebias_marmoratus
ENSSPAG00000007484	usb1	91	66.667	ENSLBEG00000008452	usb1	86	64.643	Labrus_bergylta
ENSSPAG00000007484	usb1	68	56.122	ENSLACG00000000105	USB1	86	50.198	Latimeria_chalumnae
ENSSPAG00000007484	usb1	99	50.853	ENSLOCG00000000465	usb1	99	50.508	Lepisosteus_oculatus
ENSSPAG00000007484	usb1	99	39.310	ENSLAFG00000002267	USB1	83	42.857	Loxodonta_africana
ENSSPAG00000007484	usb1	80	52.423	ENSMFAG00000003926	USB1	98	46.528	Macaca_fascicularis
ENSSPAG00000007484	usb1	80	52.423	ENSMMUG00000022669	USB1	98	46.528	Macaca_mulatta
ENSSPAG00000007484	usb1	80	51.982	ENSMNEG00000042487	USB1	98	46.181	Macaca_nemestrina
ENSSPAG00000007484	usb1	80	52.423	ENSMLEG00000028756	USB1	98	46.528	Mandrillus_leucophaeus
ENSSPAG00000007484	usb1	100	74.296	ENSMAMG00000015092	usb1	100	73.868	Mastacembelus_armatus
ENSSPAG00000007484	usb1	99	74.035	ENSMZEG00005010008	usb1	99	75.439	Maylandia_zebra
ENSSPAG00000007484	usb1	99	48.410	ENSMAUG00000007832	Usb1	98	45.936	Mesocricetus_auratus
ENSSPAG00000007484	usb1	99	45.230	ENSMICG00000004900	USB1	98	46.643	Microcebus_murinus
ENSSPAG00000007484	usb1	99	48.763	ENSMOCG00000022647	Usb1	98	46.996	Microtus_ochrogaster
ENSSPAG00000007484	usb1	79	74.554	ENSMMOG00000000490	usb1	100	63.636	Mola_mola
ENSSPAG00000007484	usb1	76	53.670	ENSMODG00000014067	USB1	85	53.744	Monodelphis_domestica
ENSSPAG00000007484	usb1	99	72.535	ENSMALG00000005930	usb1	99	72.632	Monopterus_albus
ENSSPAG00000007484	usb1	99	47.350	MGP_CAROLIEiJ_G0031421	Usb1	99	50.000	Mus_caroli
ENSSPAG00000007484	usb1	99	46.643	ENSMUSG00000031792	Usb1	99	50.000	Mus_musculus
ENSSPAG00000007484	usb1	81	52.381	MGP_PahariEiJ_G0023019	Usb1	100	52.137	Mus_pahari
ENSSPAG00000007484	usb1	99	46.643	MGP_SPRETEiJ_G0032540	Usb1	98	46.643	Mus_spretus
ENSSPAG00000007484	usb1	82	50.215	ENSMPUG00000004684	USB1	94	46.643	Mustela_putorius_furo
ENSSPAG00000007484	usb1	80	52.863	ENSMLUG00000007400	USB1	98	52.863	Myotis_lucifugus
ENSSPAG00000007484	usb1	80	53.304	ENSNGAG00000009703	Usb1	98	48.410	Nannospalax_galili
ENSSPAG00000007484	usb1	99	67.944	ENSNBRG00000008747	usb1	99	79.343	Neolamprologus_brichardi
ENSSPAG00000007484	usb1	73	52.885	ENSNLEG00000003340	USB1	83	52.885	Nomascus_leucogenys
ENSSPAG00000007484	usb1	99	48.227	ENSODEG00000016214	USB1	98	48.227	Octodon_degus
ENSSPAG00000007484	usb1	99	76.056	ENSONIG00000011063	usb1	100	75.704	Oreochromis_niloticus
ENSSPAG00000007484	usb1	79	52.889	ENSOANG00000012118	USB1	94	52.889	Ornithorhynchus_anatinus
ENSSPAG00000007484	usb1	86	77.778	ENSORLG00000012479	usb1	99	71.479	Oryzias_latipes
ENSSPAG00000007484	usb1	86	76.955	ENSORLG00020018671	usb1	99	71.127	Oryzias_latipes_hni
ENSSPAG00000007484	usb1	93	74.242	ENSORLG00015009679	usb1	99	72.183	Oryzias_latipes_hsok
ENSSPAG00000007484	usb1	99	74.205	ENSOMEG00000012930	usb1	99	74.205	Oryzias_melastigma
ENSSPAG00000007484	usb1	99	43.816	ENSOGAG00000003273	USB1	98	42.756	Otolemur_garnettii
ENSSPAG00000007484	usb1	83	49.580	ENSOARG00000001107	USB1	91	49.580	Ovis_aries
ENSSPAG00000007484	usb1	80	51.542	ENSPPAG00000042137	USB1	86	51.542	Pan_paniscus
ENSSPAG00000007484	usb1	82	50.215	ENSPPRG00000024797	USB1	98	46.127	Panthera_pardus
ENSSPAG00000007484	usb1	82	49.785	ENSPTIG00000007506	USB1	98	45.775	Panthera_tigris_altaica
ENSSPAG00000007484	usb1	80	48.899	ENSPTRG00000008172	USB1	100	52.336	Pan_troglodytes
ENSSPAG00000007484	usb1	80	52.423	ENSPANG00000025138	USB1	98	46.528	Papio_anubis
ENSSPAG00000007484	usb1	80	62.661	ENSPKIG00000015109	usb1	99	54.027	Paramormyrops_kingsleyae
ENSSPAG00000007484	usb1	79	47.788	ENSPSIG00000004305	USB1	100	47.788	Pelodiscus_sinensis
ENSSPAG00000007484	usb1	79	68.750	ENSPMGG00000017725	usb1	86	68.750	Periophthalmus_magnuspinnatus
ENSSPAG00000007484	usb1	99	47.887	ENSPEMG00000016183	Usb1	98	47.350	Peromyscus_maniculatus_bairdii
ENSSPAG00000007484	usb1	78	48.889	ENSPMAG00000000462	usb1	95	48.889	Petromyzon_marinus
ENSSPAG00000007484	usb1	99	72.535	ENSPFOG00000011130	usb1	99	72.535	Poecilia_formosa
ENSSPAG00000007484	usb1	99	72.183	ENSPLAG00000009820	usb1	99	72.183	Poecilia_latipinna
ENSSPAG00000007484	usb1	99	72.535	ENSPMEG00000006402	usb1	99	72.535	Poecilia_mexicana
ENSSPAG00000007484	usb1	88	71.429	ENSPREG00000001047	usb1	99	72.619	Poecilia_reticulata
ENSSPAG00000007484	usb1	73	49.761	ENSPPYG00000007401	USB1	83	49.761	Pongo_abelii
ENSSPAG00000007484	usb1	80	51.542	ENSPCOG00000022612	USB1	98	45.139	Propithecus_coquereli
ENSSPAG00000007484	usb1	99	46.290	ENSPVAG00000004613	USB1	86	51.339	Pteropus_vampyrus
ENSSPAG00000007484	usb1	99	74.737	ENSPNYG00000022262	usb1	99	75.789	Pundamilia_nyererei
ENSSPAG00000007484	usb1	79	63.393	ENSPNAG00000011736	usb1	100	53.898	Pygocentrus_nattereri
ENSSPAG00000007484	usb1	99	48.410	ENSRNOG00000013216	Usb1	98	47.703	Rattus_norvegicus
ENSSPAG00000007484	usb1	80	49.339	ENSRBIG00000044466	USB1	100	52.804	Rhinopithecus_bieti
ENSSPAG00000007484	usb1	80	52.423	ENSRROG00000029211	USB1	98	46.831	Rhinopithecus_roxellana
ENSSPAG00000007484	usb1	80	52.423	ENSSBOG00000029362	USB1	86	52.423	Saimiri_boliviensis_boliviensis
ENSSPAG00000007484	usb1	76	50.459	ENSSHAG00000006993	USB1	90	51.101	Sarcophilus_harrisii
ENSSPAG00000007484	usb1	79	65.919	ENSSFOG00015023663	usb1	91	57.292	Scleropages_formosus
ENSSPAG00000007484	usb1	99	69.697	ENSSMAG00000015834	usb1	99	69.128	Scophthalmus_maximus
ENSSPAG00000007484	usb1	79	81.696	ENSSDUG00000002949	usb1	99	69.825	Seriola_dumerili
ENSSPAG00000007484	usb1	99	75.972	ENSSLDG00000014174	usb1	99	76.325	Seriola_lalandi_dorsalis
ENSSPAG00000007484	usb1	75	52.804	ENSSPUG00000006741	USB1	100	52.804	Sphenodon_punctatus
ENSSPAG00000007484	usb1	83	50.840	ENSSSCG00000002807	USB1	98	48.057	Sus_scrofa
ENSSPAG00000007484	usb1	77	53.182	ENSTGUG00000004792	USB1	87	52.703	Taeniopygia_guttata
ENSSPAG00000007484	usb1	100	66.549	ENSTRUG00000021069	usb1	100	65.278	Takifugu_rubripes
ENSSPAG00000007484	usb1	100	56.690	ENSTNIG00000000626	usb1	98	55.401	Tetraodon_nigroviridis
ENSSPAG00000007484	usb1	79	36.161	ENSTBEG00000001507	USB1	97	36.161	Tupaia_belangeri
ENSSPAG00000007484	usb1	82	51.931	ENSUAMG00000016823	USB1	98	47.719	Ursus_americanus
ENSSPAG00000007484	usb1	75	53.271	ENSUMAG00000021369	USB1	100	53.271	Ursus_maritimus
ENSSPAG00000007484	usb1	85	50.202	ENSVVUG00000023700	USB1	87	52.655	Vulpes_vulpes
ENSSPAG00000007484	usb1	76	54.587	ENSXETG00000013795	usb1	89	54.709	Xenopus_tropicalis
ENSSPAG00000007484	usb1	89	74.902	ENSXMAG00000024687	usb1	81	71.260	Xiphophorus_maculatus