EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000008800 (Gene tree)
Gene ID: 103357817
Gene Symbol: gfm1
Alias: fc96f12|wu:fc96f12|zgc:154041
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 18236 bases
Position: chrKK580346.1:263421-281656
Accession: 103357817
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000011627	GTP_EFTU	PF00009.27	5.2e-63	1	1
ENSSPAP00000011627	GTP_EFTU_D2	PF03144.25	6.5e-17	1	1
ENSSPAP00000011627	EFG_IV	PF03764.18	3.6e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000011832	-	6288	XM_008282531	ENSSPAP00000011627	748 (aa)	XP_008280753	UPI00049691D7

Gene Model

Click here to download ENSSPAG00000008800's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000008800's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000008800	gfm1	75	38.255	ENSSPAG00000021897	-	73	38.255
ENSSPAG00000008800	gfm1	93	32.828	ENSSPAG00000014163	gfm2	96	32.966

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000008800	gfm1	98	79.048	ENSG00000168827	GFM1	100	93.333	Homo_sapiens
ENSSPAG00000008800	gfm1	92	92.587	ENSAPOG00000016489	gfm1	98	92.587	Acanthochromis_polyacanthus
ENSSPAG00000008800	gfm1	96	81.198	ENSAMEG00000013542	GFM1	100	78.884	Ailuropoda_melanoleuca
ENSSPAG00000008800	gfm1	97	88.414	ENSACIG00000014465	gfm1	94	88.414	Amphilophus_citrinellus
ENSSPAG00000008800	gfm1	100	92.513	ENSAOCG00000006023	gfm1	100	92.513	Amphiprion_ocellaris
ENSSPAG00000008800	gfm1	100	92.380	ENSAPEG00000024499	gfm1	100	92.380	Amphiprion_percula
ENSSPAG00000008800	gfm1	100	91.444	ENSATEG00000013789	gfm1	100	91.444	Anabas_testudineus
ENSSPAG00000008800	gfm1	97	80.414	ENSAPLG00000005022	GFM1	100	80.414	Anas_platyrhynchos
ENSSPAG00000008800	gfm1	97	80.690	ENSACAG00000006829	GFM1	98	80.690	Anolis_carolinensis
ENSSPAG00000008800	gfm1	100	78.162	ENSANAG00000035983	GFM1	100	78.162	Aotus_nancymaae
ENSSPAG00000008800	gfm1	100	93.048	ENSACLG00000016586	gfm1	100	93.048	Astatotilapia_calliptera
ENSSPAG00000008800	gfm1	100	85.428	ENSAMXG00000013435	gfm1	98	86.320	Astyanax_mexicanus
ENSSPAG00000008800	gfm1	96	80.641	ENSBTAG00000027795	GFM1	95	80.641	Bos_taurus
ENSSPAG00000008800	gfm1	94	57.775	WBGene00009246	gfm-1	95	57.444	Caenorhabditis_elegans
ENSSPAG00000008800	gfm1	97	80.441	ENSCJAG00000000363	GFM1	97	80.441	Callithrix_jacchus
ENSSPAG00000008800	gfm1	98	79.837	ENSCAFG00000009006	GFM1	100	80.621	Canis_familiaris
ENSSPAG00000008800	gfm1	98	79.728	ENSCAFG00020005878	GFM1	98	81.198	Canis_lupus_dingo
ENSSPAG00000008800	gfm1	96	80.919	ENSCHIG00000015220	GFM1	95	80.919	Capra_hircus
ENSSPAG00000008800	gfm1	100	77.955	ENSTSYG00000002013	GFM1	100	77.955	Carlito_syrichta
ENSSPAG00000008800	gfm1	96	70.304	ENSCAPG00000005699	GFM1	97	70.304	Cavia_aperea
ENSSPAG00000008800	gfm1	100	78.249	ENSCPOG00000001194	GFM1	100	78.249	Cavia_porcellus
ENSSPAG00000008800	gfm1	100	78.013	ENSCCAG00000025561	GFM1	100	78.013	Cebus_capucinus
ENSSPAG00000008800	gfm1	100	78.429	ENSCATG00000037622	GFM1	100	78.429	Cercocebus_atys
ENSSPAG00000008800	gfm1	97	79.339	ENSCLAG00000002503	GFM1	96	79.339	Chinchilla_lanigera
ENSSPAG00000008800	gfm1	100	78.562	ENSCSAG00000012162	GFM1	100	78.562	Chlorocebus_sabaeus
ENSSPAG00000008800	gfm1	100	69.525	ENSCHOG00000004867	GFM1	100	69.525	Choloepus_hoffmanni
ENSSPAG00000008800	gfm1	100	80.641	ENSCPBG00000018367	GFM1	99	80.641	Chrysemys_picta_bellii
ENSSPAG00000008800	gfm1	94	58.881	ENSCING00000011960	-	93	58.881	Ciona_intestinalis
ENSSPAG00000008800	gfm1	95	60.139	ENSCSAVG00000008514	-	99	60.139	Ciona_savignyi
ENSSPAG00000008800	gfm1	98	79.184	ENSCANG00000031714	GFM1	100	78.162	Colobus_angolensis_palliatus
ENSSPAG00000008800	gfm1	100	78.162	ENSCGRG00001022095	GFM1	100	78.162	Cricetulus_griseus_chok1gshd
ENSSPAG00000008800	gfm1	100	78.162	ENSCGRG00000012043	GFM1	100	78.162	Cricetulus_griseus_crigri
ENSSPAG00000008800	gfm1	97	83.126	ENSCSEG00000017088	gfm1	99	83.126	Cynoglossus_semilaevis
ENSSPAG00000008800	gfm1	100	93.182	ENSCVAG00000004126	gfm1	100	93.182	Cyprinodon_variegatus
ENSSPAG00000008800	gfm1	100	82.219	ENSDARG00000063624	gfm1	100	82.219	Danio_rerio
ENSSPAG00000008800	gfm1	55	78.240	ENSDNOG00000016385	-	100	78.240	Dasypus_novemcinctus
ENSSPAG00000008800	gfm1	99	77.358	ENSDORG00000014165	Gfm1	98	77.358	Dipodomys_ordii
ENSSPAG00000008800	gfm1	95	68.829	FBgn0263133	mEFG1	95	68.829	Drosophila_melanogaster
ENSSPAG00000008800	gfm1	96	72.954	ENSETEG00000019197	GFM1	95	72.954	Echinops_telfairi
ENSSPAG00000008800	gfm1	90	63.259	ENSEBUG00000012794	gfm1	100	63.259	Eptatretus_burgeri
ENSSPAG00000008800	gfm1	96	59.722	ENSEEUG00000000429	GFM1	99	59.722	Erinaceus_europaeus
ENSSPAG00000008800	gfm1	100	87.567	ENSELUG00000014728	gfm1	100	87.567	Esox_lucius
ENSSPAG00000008800	gfm1	97	80.165	ENSFCAG00000013291	GFM1	100	78.249	Felis_catus
ENSSPAG00000008800	gfm1	90	80.148	ENSFALG00000007619	GFM1	100	80.148	Ficedula_albicollis
ENSSPAG00000008800	gfm1	100	77.984	ENSFDAG00000016559	GFM1	100	77.984	Fukomys_damarensis
ENSSPAG00000008800	gfm1	100	92.246	ENSFHEG00000006091	gfm1	100	92.246	Fundulus_heteroclitus
ENSSPAG00000008800	gfm1	97	87.758	ENSGMOG00000010161	gfm1	100	87.758	Gadus_morhua
ENSSPAG00000008800	gfm1	97	80.276	ENSGALG00000009634	GFM1	98	80.276	Gallus_gallus
ENSSPAG00000008800	gfm1	100	91.444	ENSGAFG00000012527	gfm1	100	91.444	Gambusia_affinis
ENSSPAG00000008800	gfm1	100	91.055	ENSGACG00000009864	gfm1	100	91.055	Gasterosteus_aculeatus
ENSSPAG00000008800	gfm1	98	79.320	ENSGGOG00000003085	GFM1	100	78.296	Gorilla_gorilla
ENSSPAG00000008800	gfm1	100	93.182	ENSHBUG00000002120	gfm1	100	93.182	Haplochromis_burtoni
ENSSPAG00000008800	gfm1	97	79.063	ENSHGLG00000016855	GFM1	100	76.923	Heterocephalus_glaber_female
ENSSPAG00000008800	gfm1	97	79.063	ENSHGLG00100013049	GFM1	100	76.923	Heterocephalus_glaber_male
ENSSPAG00000008800	gfm1	100	90.241	ENSHCOG00000007638	gfm1	100	90.241	Hippocampus_comes
ENSSPAG00000008800	gfm1	100	86.230	ENSIPUG00000005873	gfm1	100	86.230	Ictalurus_punctatus
ENSSPAG00000008800	gfm1	97	77.961	ENSSTOG00000010150	GFM1	98	77.961	Ictidomys_tridecemlineatus
ENSSPAG00000008800	gfm1	100	77.364	ENSJJAG00000016447	Gfm1	100	77.364	Jaculus_jaculus
ENSSPAG00000008800	gfm1	100	87.701	ENSKMAG00000020768	gfm1	100	87.701	Kryptolebias_marmoratus
ENSSPAG00000008800	gfm1	94	90.585	ENSLBEG00000021315	gfm1	100	90.585	Labrus_bergylta
ENSSPAG00000008800	gfm1	100	80.080	ENSLACG00000012295	GFM1	100	80.080	Latimeria_chalumnae
ENSSPAG00000008800	gfm1	97	79.207	ENSLOCG00000003778	gfm1	100	79.207	Lepisosteus_oculatus
ENSSPAG00000008800	gfm1	99	76.667	ENSLAFG00000010945	GFM1	99	77.639	Loxodonta_africana
ENSSPAG00000008800	gfm1	100	78.296	ENSMFAG00000035731	GFM1	100	78.296	Macaca_fascicularis
ENSSPAG00000008800	gfm1	100	78.296	ENSMMUG00000004961	GFM1	100	78.296	Macaca_mulatta
ENSSPAG00000008800	gfm1	100	78.296	ENSMNEG00000033245	GFM1	100	78.296	Macaca_nemestrina
ENSSPAG00000008800	gfm1	97	78.483	ENSMLEG00000030908	GFM1	99	78.108	Mandrillus_leucophaeus
ENSSPAG00000008800	gfm1	100	91.979	ENSMAMG00000011760	gfm1	100	91.979	Mastacembelus_armatus
ENSSPAG00000008800	gfm1	100	93.182	ENSMZEG00005016639	gfm1	100	93.182	Maylandia_zebra
ENSSPAG00000008800	gfm1	97	80.249	ENSMGAG00000010641	GFM1	97	80.249	Meleagris_gallopavo
ENSSPAG00000008800	gfm1	97	80.276	ENSMAUG00000000611	Gfm1	97	80.276	Mesocricetus_auratus
ENSSPAG00000008800	gfm1	97	80.303	ENSMICG00000049086	GFM1	96	80.303	Microcebus_murinus
ENSSPAG00000008800	gfm1	100	78.429	ENSMOCG00000000465	Gfm1	100	78.429	Microtus_ochrogaster
ENSSPAG00000008800	gfm1	97	90.634	ENSMMOG00000012538	gfm1	98	90.634	Mola_mola
ENSSPAG00000008800	gfm1	99	79.376	ENSMODG00000015673	GFM1	99	79.376	Monodelphis_domestica
ENSSPAG00000008800	gfm1	96	89.819	ENSMALG00000012508	gfm1	95	89.819	Monopterus_albus
ENSSPAG00000008800	gfm1	96	80.474	MGP_CAROLIEiJ_G0025052	Gfm1	100	77.630	Mus_caroli
ENSSPAG00000008800	gfm1	96	80.474	ENSMUSG00000027774	Gfm1	95	80.474	Mus_musculus
ENSSPAG00000008800	gfm1	100	77.630	MGP_PahariEiJ_G0026495	Gfm1	100	77.630	Mus_pahari
ENSSPAG00000008800	gfm1	96	80.474	MGP_SPRETEiJ_G0025994	Gfm1	95	80.474	Mus_spretus
ENSSPAG00000008800	gfm1	97	80.441	ENSMPUG00000002859	GFM1	96	80.441	Mustela_putorius_furo
ENSSPAG00000008800	gfm1	97	80.579	ENSMLUG00000000452	GFM1	96	80.579	Myotis_lucifugus
ENSSPAG00000008800	gfm1	100	77.600	ENSNGAG00000012375	Gfm1	100	77.600	Nannospalax_galili
ENSSPAG00000008800	gfm1	97	92.995	ENSNBRG00000004631	gfm1	99	92.995	Neolamprologus_brichardi
ENSSPAG00000008800	gfm1	97	79.890	ENSNLEG00000004176	GFM1	100	78.029	Nomascus_leucogenys
ENSSPAG00000008800	gfm1	91	71.618	ENSMEUG00000007784	GFM1	99	71.618	Notamacropus_eugenii
ENSSPAG00000008800	gfm1	100	77.837	ENSOPRG00000009860	GFM1	100	77.837	Ochotona_princeps
ENSSPAG00000008800	gfm1	98	79.564	ENSODEG00000004316	GFM1	100	78.249	Octodon_degus
ENSSPAG00000008800	gfm1	100	93.048	ENSONIG00000003772	gfm1	100	93.048	Oreochromis_niloticus
ENSSPAG00000008800	gfm1	98	79.837	ENSOCUG00000013561	GFM1	97	79.837	Oryctolagus_cuniculus
ENSSPAG00000008800	gfm1	95	91.384	ENSORLG00000006487	gfm1	100	91.384	Oryzias_latipes
ENSSPAG00000008800	gfm1	100	90.508	ENSORLG00020003362	gfm1	100	90.508	Oryzias_latipes_hni
ENSSPAG00000008800	gfm1	100	90.508	ENSORLG00015005829	gfm1	100	90.508	Oryzias_latipes_hsok
ENSSPAG00000008800	gfm1	100	91.845	ENSOMEG00000012894	gfm1	100	91.845	Oryzias_melastigma
ENSSPAG00000008800	gfm1	97	79.752	ENSOGAG00000008298	GFM1	96	79.752	Otolemur_garnettii
ENSSPAG00000008800	gfm1	96	80.028	ENSOARG00000002409	GFM1	99	80.028	Ovis_aries
ENSSPAG00000008800	gfm1	98	79.320	ENSPPAG00000033881	GFM1	100	78.296	Pan_paniscus
ENSSPAG00000008800	gfm1	97	80.165	ENSPPRG00000009281	GFM1	100	78.249	Panthera_pardus
ENSSPAG00000008800	gfm1	97	80.028	ENSPTIG00000012416	GFM1	100	78.117	Panthera_tigris_altaica
ENSSPAG00000008800	gfm1	98	79.320	ENSPTRG00000015570	GFM1	100	78.296	Pan_troglodytes
ENSSPAG00000008800	gfm1	100	78.296	ENSPANG00000016512	GFM1	100	78.296	Papio_anubis
ENSSPAG00000008800	gfm1	100	83.422	ENSPKIG00000004876	gfm1	100	83.422	Paramormyrops_kingsleyae
ENSSPAG00000008800	gfm1	100	80.507	ENSPSIG00000012567	GFM1	99	80.507	Pelodiscus_sinensis
ENSSPAG00000008800	gfm1	97	88.000	ENSPMGG00000014068	gfm1	100	87.862	Periophthalmus_magnuspinnatus
ENSSPAG00000008800	gfm1	100	77.896	ENSPEMG00000008942	Gfm1	100	77.896	Peromyscus_maniculatus_bairdii
ENSSPAG00000008800	gfm1	86	77.209	ENSPCIG00000020195	GFM1	95	80.164	Phascolarctos_cinereus
ENSSPAG00000008800	gfm1	100	92.781	ENSPFOG00000011022	gfm1	100	92.781	Poecilia_formosa
ENSSPAG00000008800	gfm1	97	93.232	ENSPLAG00000019585	gfm1	100	92.275	Poecilia_latipinna
ENSSPAG00000008800	gfm1	100	92.647	ENSPMEG00000012376	gfm1	100	92.647	Poecilia_mexicana
ENSSPAG00000008800	gfm1	100	92.781	ENSPREG00000001332	gfm1	95	92.781	Poecilia_reticulata
ENSSPAG00000008800	gfm1	98	78.912	ENSPPYG00000014244	GFM1	100	77.896	Pongo_abelii
ENSSPAG00000008800	gfm1	94	78.805	ENSPCAG00000008934	GFM1	100	78.805	Procavia_capensis
ENSSPAG00000008800	gfm1	98	79.155	ENSPCOG00000022259	GFM1	100	77.719	Propithecus_coquereli
ENSSPAG00000008800	gfm1	97	79.614	ENSPVAG00000013605	GFM1	96	79.614	Pteropus_vampyrus
ENSSPAG00000008800	gfm1	100	92.914	ENSPNYG00000006037	gfm1	100	92.914	Pundamilia_nyererei
ENSSPAG00000008800	gfm1	100	85.428	ENSPNAG00000001237	gfm1	100	85.428	Pygocentrus_nattereri
ENSSPAG00000008800	gfm1	97	80.276	ENSRNOG00000012873	Gfm1	97	80.276	Rattus_norvegicus
ENSSPAG00000008800	gfm1	98	79.184	ENSRBIG00000031363	GFM1	100	78.162	Rhinopithecus_bieti
ENSSPAG00000008800	gfm1	98	79.320	ENSRROG00000031081	GFM1	100	78.296	Rhinopithecus_roxellana
ENSSPAG00000008800	gfm1	92	56.484	YLR069C	-	90	56.484	Saccharomyces_cerevisiae
ENSSPAG00000008800	gfm1	100	78.296	ENSSBOG00000023252	GFM1	100	78.296	Saimiri_boliviensis_boliviensis
ENSSPAG00000008800	gfm1	97	81.328	ENSSHAG00000017772	GFM1	97	81.103	Sarcophilus_harrisii
ENSSPAG00000008800	gfm1	100	84.112	ENSSFOG00015003117	gfm1	100	84.112	Scleropages_formosus
ENSSPAG00000008800	gfm1	100	91.310	ENSSMAG00000013221	gfm1	100	91.310	Scophthalmus_maximus
ENSSPAG00000008800	gfm1	100	93.048	ENSSDUG00000018665	gfm1	100	93.048	Seriola_dumerili
ENSSPAG00000008800	gfm1	100	92.914	ENSSLDG00000020606	gfm1	100	92.914	Seriola_lalandi_dorsalis
ENSSPAG00000008800	gfm1	99	77.402	ENSSPUG00000018686	GFM1	100	77.402	Sphenodon_punctatus
ENSSPAG00000008800	gfm1	96	80.501	ENSSSCG00000025651	GFM1	95	80.501	Sus_scrofa
ENSSPAG00000008800	gfm1	100	88.636	ENSTRUG00000009244	gfm1	100	88.636	Takifugu_rubripes
ENSSPAG00000008800	gfm1	100	91.176	ENSTNIG00000007729	gfm1	100	91.176	Tetraodon_nigroviridis
ENSSPAG00000008800	gfm1	90	72.000	ENSTBEG00000017404	GFM1	89	72.000	Tupaia_belangeri
ENSSPAG00000008800	gfm1	96	80.362	ENSTTRG00000001735	GFM1	95	80.362	Tursiops_truncatus
ENSSPAG00000008800	gfm1	97	80.303	ENSUAMG00000026381	GFM1	96	80.303	Ursus_americanus
ENSSPAG00000008800	gfm1	97	80.303	ENSUMAG00000011268	GFM1	96	80.303	Ursus_maritimus
ENSSPAG00000008800	gfm1	97	76.828	ENSVPAG00000009444	GFM1	96	76.828	Vicugna_pacos
ENSSPAG00000008800	gfm1	98	79.781	ENSVVUG00000020091	GFM1	100	80.473	Vulpes_vulpes
ENSSPAG00000008800	gfm1	100	81.649	ENSXETG00000032551	GFM1	100	81.649	Xenopus_tropicalis
ENSSPAG00000008800	gfm1	54	88.089	ENSXCOG00000012590	gfm1	93	88.089	Xiphophorus_couchianus
ENSSPAG00000008800	gfm1	100	92.246	ENSXMAG00000000261	gfm1	100	92.246	Xiphophorus_maculatus