EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000008909 (Gene tree)
Gene ID: -
Gene Symbol: polr3b (1 of many)
Alias: si:dkey-103i16.3|slim jim|slj|wu:fc20h06
Full Name: polymerase (RNA) III (DNA directed) polypeptide B
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 8652 bases
Position: chrKK581947.1:25219-33870
Accession: ZDB-GENE-030131-2887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000011748	RNA_pol_Rpb2_7	PF04560.20	2.8e-35	1	1
ENSSPAP00000011748	RNA_pol_Rpb2_6	PF00562.28	7.5e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000011953	-	1023	-	ENSSPAP00000011748	340 (aa)	-	-

Gene Model

Click here to download ENSSPAG00000008909's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000008909's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000008909	polr3b	95	47.024	ENSSPAG00000019229	-	67	47.024

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000008909	polr3b	60	82.439	ENSCING00000023381	-	100	82.439	Ciona_intestinalis
ENSSPAG00000008909	polr3b	95	46.933	ENSGAFG00000016488	-	99	46.933	Gambusia_affinis
ENSSPAG00000008909	polr3b	100	87.464	ENSHBUG00000008882	polr3b	100	87.464	Haplochromis_burtoni
ENSSPAG00000008909	polr3b	94	44.880	ENSMICG00000015166	POLR2B	66	44.880	Microcebus_murinus
ENSSPAG00000008909	polr3b	100	94.169	ENSOMEG00000010619	polr3b	100	94.169	Oryzias_melastigma
ENSSPAG00000008909	polr3b	77	32.857	ENSPMGG00000017095	-	74	32.857	Periophthalmus_magnuspinnatus
ENSSPAG00000008909	polr3b	100	95.627	ENSPMGG00000013671	polr3b	100	95.627	Periophthalmus_magnuspinnatus
ENSSPAG00000008909	polr3b	100	86.628	ENSPMAG00000008197	-	71	86.628	Petromyzon_marinus
ENSSPAG00000008909	polr3b	94	38.855	ENSPCOG00000009281	-	73	38.855	Propithecus_coquereli
ENSSPAG00000008909	polr3b	94	46.526	ENSRBIG00000042838	POLR2B	66	46.386	Rhinopithecus_bieti
ENSSPAG00000008909	polr3b	100	93.878	ENSSPUG00000004905	-	100	93.878	Sphenodon_punctatus
ENSSPAG00000008909	polr3b	94	46.386	ENSSPUG00000018295	POLR2B	66	46.386	Sphenodon_punctatus
ENSSPAG00000008909	polr3b	94	46.687	ENSUAMG00000003345	-	75	46.687	Ursus_americanus
ENSSPAG00000008909	polr3b	100	93.294	ENSUAMG00000024267	POLR3B	54	93.294	Ursus_americanus
ENSSPAG00000008909	polr3b	95	46.483	ENSXCOG00000014654	-	99	46.483	Xiphophorus_couchianus