EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000009109 (Gene tree)
Gene ID: 103352893
Gene Symbol: arl13a
Alias: zgc:73398
Full Name: ADP-ribosylation factor-like protein 13B
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 6290 bases
Position: chrKK580073.1:683837-690126
Accession: 103352893
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000012086	MMR_HSR1	PF01926.23	9.8e-06	1	1
ENSSPAP00000012053	MMR_HSR1	PF01926.23	1.1e-05	1	1
ENSSPAP00000012028	MMR_HSR1	PF01926.23	9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000012259	-	2363	XM_008275604	ENSSPAP00000012053	402 (aa)	XP_008273826	-
ENSSPAT00000012234	-	789	-	ENSSPAP00000012028	262 (aa)	-	-
ENSSPAT00000012291	-	1089	-	ENSSPAP00000012086	362 (aa)	-	-

Gene Model

Click here to download ENSSPAG00000009109's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000009109's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000009109	arl13a	55	32.450	ENSSPAG00000017634	sar1b	76	32.450
ENSSPAG00000009109	arl13a	56	31.013	ENSSPAG00000004205	-	77	32.704
ENSSPAG00000009109	arl13a	52	32.414	ENSSPAG00000017528	ARL6	78	32.414
ENSSPAG00000009109	arl13a	50	36.029	ENSSPAG00000003427	-	76	37.226
ENSSPAG00000009109	arl13a	55	37.838	ENSSPAG00000022680	-	81	38.926
ENSSPAG00000009109	arl13a	52	30.496	ENSSPAG00000020792	arl8bb	81	31.618
ENSSPAG00000009109	arl13a	67	32.222	ENSSPAG00000017321	arl2	93	32.222
ENSSPAG00000009109	arl13a	54	31.724	ENSSPAG00000007687	arl5c	79	32.192
ENSSPAG00000009109	arl13a	50	32.353	ENSSPAG00000015869	arl8a	72	32.353
ENSSPAG00000009109	arl13a	58	35.849	ENSSPAG00000014539	arl14	76	36.478
ENSSPAG00000009109	arl13a	52	30.380	ENSSPAG00000013916	-	81	30.380
ENSSPAG00000009109	arl13a	55	34.228	ENSSPAG00000005773	arl11	90	34.694
ENSSPAG00000009109	arl13a	57	33.333	ENSSPAG00000001502	-	78	33.974
ENSSPAG00000009109	arl13a	56	31.373	ENSSPAG00000014422	-	73	32.468
ENSSPAG00000009109	arl13a	65	30.058	ENSSPAG00000009787	arl3	96	30.114
ENSSPAG00000009109	arl13a	61	30.675	ENSSPAG00000012402	arl8	87	32.877
ENSSPAG00000009109	arl13a	62	33.533	ENSSPAG00000007465	arf2b	87	34.524
ENSSPAG00000009109	arl13a	61	33.533	ENSSPAG00000017484	-	96	33.742
ENSSPAG00000009109	arl13a	81	46.296	ENSSPAG00000016442	arl13b	62	42.537
ENSSPAG00000009109	arl13a	62	33.533	ENSSPAG00000014434	arf5	88	33.533

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000009109	arl13a	100	78.372	ENSACIG00000012235	arl13a	87	80.165	Amphilophus_citrinellus
ENSSPAG00000009109	arl13a	89	91.341	ENSAOCG00000024309	arl13a	83	91.389	Amphiprion_ocellaris
ENSSPAG00000009109	arl13a	95	95.263	ENSAPEG00000006626	arl13a	87	94.805	Amphiprion_percula
ENSSPAG00000009109	arl13a	96	85.530	ENSATEG00000018113	arl13a	100	77.720	Anabas_testudineus
ENSSPAG00000009109	arl13a	100	79.040	ENSACLG00000000738	arl13a	86	81.894	Astatotilapia_calliptera
ENSSPAG00000009109	arl13a	87	75.107	ENSAMXG00000021495	arl13a	95	65.301	Astyanax_mexicanus
ENSSPAG00000009109	arl13a	81	49.767	ENSCPBG00000014304	ARL13A	84	49.115	Chrysemys_picta_bellii
ENSSPAG00000009109	arl13a	75	39.801	ENSCGRG00001021947	Arl13a	53	40.488	Cricetulus_griseus_chok1gshd
ENSSPAG00000009109	arl13a	75	39.801	ENSCGRG00000007297	Arl13a	53	40.488	Cricetulus_griseus_crigri
ENSSPAG00000009109	arl13a	84	76.000	ENSCSEG00000002533	arl13a	62	78.947	Cynoglossus_semilaevis
ENSSPAG00000009109	arl13a	95	82.292	ENSCVAG00000005783	arl13a	87	80.829	Cyprinodon_variegatus
ENSSPAG00000009109	arl13a	87	77.056	ENSDARG00000052575	arl13a	74	79.279	Danio_rerio
ENSSPAG00000009109	arl13a	60	54.321	ENSFALG00000003829	ARL13A	100	54.601	Ficedula_albicollis
ENSSPAG00000009109	arl13a	96	82.946	ENSFHEG00000017023	arl13a	87	81.606	Fundulus_heteroclitus
ENSSPAG00000009109	arl13a	96	81.395	ENSGAFG00000019994	arl13a	99	74.112	Gambusia_affinis
ENSSPAG00000009109	arl13a	87	84.914	ENSGACG00000017318	arl13a	78	87.838	Gasterosteus_aculeatus
ENSSPAG00000009109	arl13a	96	88.021	ENSHBUG00000016100	arl13a	87	87.532	Haplochromis_burtoni
ENSSPAG00000009109	arl13a	87	86.344	ENSHCOG00000005206	arl13a	76	87.850	Hippocampus_comes
ENSSPAG00000009109	arl13a	99	60.630	ENSIPUG00000017720	arl13a	98	58.793	Ictalurus_punctatus
ENSSPAG00000009109	arl13a	96	78.442	ENSKMAG00000001139	arl13a	87	78.553	Kryptolebias_marmoratus
ENSSPAG00000009109	arl13a	96	83.594	ENSLBEG00000028724	arl13a	99	75.065	Labrus_bergylta
ENSSPAG00000009109	arl13a	100	49.398	ENSLOCG00000015307	arl13a	72	63.063	Lepisosteus_oculatus
ENSSPAG00000009109	arl13a	87	88.362	ENSMAMG00000020385	arl13a	77	90.541	Mastacembelus_armatus
ENSSPAG00000009109	arl13a	96	88.021	ENSMZEG00005007052	arl13a	87	87.532	Maylandia_zebra
ENSSPAG00000009109	arl13a	64	47.093	ENSMGAG00000004193	ARL13A	99	47.093	Meleagris_gallopavo
ENSSPAG00000009109	arl13a	75	40.299	ENSMAUG00000010729	-	51	40.976	Mesocricetus_auratus
ENSSPAG00000009109	arl13a	75	40.299	ENSMAUG00000001355	-	51	40.976	Mesocricetus_auratus
ENSSPAG00000009109	arl13a	99	73.711	ENSMMOG00000000880	arl13a	100	74.227	Mola_mola
ENSSPAG00000009109	arl13a	100	73.615	ENSMALG00000009029	arl13a	100	71.240	Monopterus_albus
ENSSPAG00000009109	arl13a	75	42.000	MGP_CAROLIEiJ_G0033386	Arl13a	53	42.000	Mus_caroli
ENSSPAG00000009109	arl13a	75	42.157	ENSMUSG00000052549	Arl13a	54	42.647	Mus_musculus
ENSSPAG00000009109	arl13a	75	43.000	MGP_PahariEiJ_G0031926	Arl13a	53	43.000	Mus_pahari
ENSSPAG00000009109	arl13a	75	42.157	MGP_SPRETEiJ_G0034551	Arl13a	53	42.647	Mus_spretus
ENSSPAG00000009109	arl13a	100	79.293	ENSNBRG00000021766	arl13a	86	82.730	Neolamprologus_brichardi
ENSSPAG00000009109	arl13a	89	88.268	ENSONIG00000002645	arl13a	87	88.301	Oreochromis_niloticus
ENSSPAG00000009109	arl13a	87	89.655	ENSORLG00000001425	arl13a	87	80.570	Oryzias_latipes
ENSSPAG00000009109	arl13a	87	89.224	ENSORLG00020021844	arl13a	87	80.570	Oryzias_latipes_hni
ENSSPAG00000009109	arl13a	87	89.655	ENSORLG00015011862	arl13a	78	91.892	Oryzias_latipes_hsok
ENSSPAG00000009109	arl13a	87	88.362	ENSOMEG00000015603	arl13a	87	80.000	Oryzias_melastigma
ENSSPAG00000009109	arl13a	90	68.880	ENSPKIG00000013558	arl13a	74	72.072	Paramormyrops_kingsleyae
ENSSPAG00000009109	arl13a	84	50.893	ENSPSIG00000003515	ARL13A	100	51.111	Pelodiscus_sinensis
ENSSPAG00000009109	arl13a	100	64.103	ENSPMGG00000017973	arl13a	99	64.615	Periophthalmus_magnuspinnatus
ENSSPAG00000009109	arl13a	87	87.069	ENSPFOG00000016707	arl13a	87	80.570	Poecilia_formosa
ENSSPAG00000009109	arl13a	100	74.936	ENSPLAG00000011307	arl13a	99	73.657	Poecilia_latipinna
ENSSPAG00000009109	arl13a	96	79.275	ENSPMEG00000017855	arl13a	87	81.347	Poecilia_mexicana
ENSSPAG00000009109	arl13a	96	80.829	ENSPREG00000011435	arl13a	87	80.829	Poecilia_reticulata
ENSSPAG00000009109	arl13a	100	78.788	ENSPNYG00000011485	arl13a	86	81.616	Pundamilia_nyererei
ENSSPAG00000009109	arl13a	75	42.500	ENSRNOG00000055454	Arl13a	51	42.500	Rattus_norvegicus
ENSSPAG00000009109	arl13a	87	69.264	ENSSFOG00015010065	arl13a	63	77.778	Scleropages_formosus
ENSSPAG00000009109	arl13a	87	87.500	ENSSMAG00000013557	arl13a	86	78.947	Scophthalmus_maximus
ENSSPAG00000009109	arl13a	100	79.630	ENSSDUG00000000933	arl13a	100	82.400	Seriola_dumerili
ENSSPAG00000009109	arl13a	96	87.240	ENSSLDG00000009973	arl13a	87	87.047	Seriola_lalandi_dorsalis
ENSSPAG00000009109	arl13a	89	83.682	ENSXCOG00000016270	arl13a	99	72.319	Xiphophorus_couchianus
ENSSPAG00000009109	arl13a	96	82.946	ENSXMAG00000013485	arl13a	99	73.183	Xiphophorus_maculatus