EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000009432 (Gene tree)
Gene ID: 103362930
Gene Symbol: rbck1
Alias: zgc:91964
Full Name: RANBP2-type and C3HC4-type zinc finger containing 1
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 8390 bases
Position: chrKK580688.1:297351-305740
Accession: 103362930
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000012418	zf-RanBP	PF00641.18	9.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000012631	-	1966	XM_008289465	ENSSPAP00000012418	519 (aa)	XP_008287687	UPI0004955B5D

Gene Model

Click here to download ENSSPAG00000009432's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000009432's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000009432	rbck1	92	44.444	ENSSPAG00000016097	shrprbck1r	74	44.336

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000009432	rbck1	100	80.880	ENSACLG00000020380	rbck1	99	81.190	Astatotilapia_calliptera
ENSSPAG00000009432	rbck1	99	61.464	ENSAMXG00000004941	rbck1	98	61.850	Astyanax_mexicanus
ENSSPAG00000009432	rbck1	100	75.763	ENSCVAG00000002649	rbck1	100	75.382	Cyprinodon_variegatus
ENSSPAG00000009432	rbck1	99	64.818	ENSELUG00000022786	rbck1	97	64.436	Esox_lucius
ENSSPAG00000009432	rbck1	100	76.145	ENSFHEG00000016918	rbck1	100	75.573	Fundulus_heteroclitus
ENSSPAG00000009432	rbck1	100	81.262	ENSHBUG00000008208	rbck1	99	81.382	Haplochromis_burtoni
ENSSPAG00000009432	rbck1	100	81.071	ENSMZEG00005005317	rbck1	99	81.382	Maylandia_zebra
ENSSPAG00000009432	rbck1	84	78.054	ENSNBRG00000006179	rbck1	90	78.409	Neolamprologus_brichardi
ENSSPAG00000009432	rbck1	98	81.942	ENSONIG00000006803	rbck1	99	82.261	Oreochromis_niloticus
ENSSPAG00000009432	rbck1	98	81.287	ENSPNYG00000012666	rbck1	98	81.605	Pundamilia_nyererei
ENSSPAG00000009432	rbck1	99	83.269	ENSSDUG00000023631	rbck1	99	83.269	Seriola_dumerili
ENSSPAG00000009432	rbck1	99	83.044	ENSSLDG00000008305	rbck1	99	83.044	Seriola_lalandi_dorsalis