EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000009485 (Gene tree)
Gene ID: 103356754
Gene Symbol: -
Alias: -
Full Name: probable ribonuclease ZC3H12C
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 19615 bases
Position: chrKK580291.1:68013-87627
Accession: 103356754
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000012489	RNase_Zc3h12a	PF11977.8	1.5e-65	1	1
ENSSPAP00000012498	RNase_Zc3h12a	PF11977.8	1.5e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000012703	-	7497	-	ENSSPAP00000012489	973 (aa)	-	UPI000497D79E
ENSSPAT00000012714	-	7354	XM_008281030	ENSSPAP00000012498	973 (aa)	XP_008279252	UPI000497D79E

Gene Model

Click here to download ENSSPAG00000009485's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000009485's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000009485	-	83	44.628	ENSSPAG00000022460	zc3h12b	61	70.914
ENSSPAG00000009485	-	99	44.912	ENSSPAG00000001850	-	99	46.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000009485	-	83	47.569	ENSAPOG00000001632	-	88	69.149	Acanthochromis_polyacanthus
ENSSPAG00000009485	-	79	92.218	ENSAPOG00000015355	-	83	90.921	Acanthochromis_polyacanthus
ENSSPAG00000009485	-	100	74.101	ENSACIG00000001362	-	97	74.488	Amphilophus_citrinellus
ENSSPAG00000009485	-	99	92.887	ENSAOCG00000003866	-	98	92.982	Amphiprion_ocellaris
ENSSPAG00000009485	-	100	84.481	ENSAPEG00000005727	-	99	92.497	Amphiprion_percula
ENSSPAG00000009485	-	72	85.571	ENSAPEG00000018582	-	99	91.525	Amphiprion_percula
ENSSPAG00000009485	-	99	44.369	ENSATEG00000002260	-	83	81.545	Anabas_testudineus
ENSSPAG00000009485	-	100	87.179	ENSATEG00000004134	-	100	87.179	Anabas_testudineus
ENSSPAG00000009485	-	64	54.803	ENSACLG00000018493	-	85	49.043	Astatotilapia_calliptera
ENSSPAG00000009485	-	100	88.284	ENSACLG00000027924	-	100	88.489	Astatotilapia_calliptera
ENSSPAG00000009485	-	99	44.400	ENSCSEG00000008542	-	67	52.769	Cynoglossus_semilaevis
ENSSPAG00000009485	-	86	80.764	ENSCSEG00000010073	-	99	80.661	Cynoglossus_semilaevis
ENSSPAG00000009485	-	100	76.489	ENSCVAG00000002328	-	100	75.975	Cyprinodon_variegatus
ENSSPAG00000009485	-	84	56.699	ENSELUG00000009319	-	95	57.716	Esox_lucius
ENSSPAG00000009485	-	91	87.500	ENSFHEG00000021225	-	100	87.500	Fundulus_heteroclitus
ENSSPAG00000009485	-	72	48.440	ENSGMOG00000017975	-	100	48.837	Gadus_morhua
ENSSPAG00000009485	-	100	76.181	ENSGAFG00000005290	-	100	75.128	Gambusia_affinis
ENSSPAG00000009485	-	65	62.000	ENSGACG00000001339	-	99	62.000	Gasterosteus_aculeatus
ENSSPAG00000009485	-	72	73.000	ENSGACG00000014201	-	100	79.898	Gasterosteus_aculeatus
ENSSPAG00000009485	-	100	88.078	ENSHBUG00000006831	-	100	88.284	Haplochromis_burtoni
ENSSPAG00000009485	-	100	64.887	ENSHCOG00000008878	-	99	83.673	Hippocampus_comes
ENSSPAG00000009485	-	100	78.608	ENSKMAG00000011694	-	100	78.381	Kryptolebias_marmoratus
ENSSPAG00000009485	-	100	82.347	ENSLBEG00000003547	-	100	82.877	Labrus_bergylta
ENSSPAG00000009485	-	97	81.876	ENSLBEG00000012554	-	99	87.593	Labrus_bergylta
ENSSPAG00000009485	-	99	45.986	ENSLBEG00000012710	-	67	54.893	Labrus_bergylta
ENSSPAG00000009485	-	99	80.417	ENSMAMG00000021794	-	98	89.299	Mastacembelus_armatus
ENSSPAG00000009485	-	99	45.895	ENSMAMG00000020372	-	99	44.631	Mastacembelus_armatus
ENSSPAG00000009485	-	100	88.181	ENSMZEG00005007718	-	100	88.386	Maylandia_zebra
ENSSPAG00000009485	-	64	54.803	ENSMZEG00005019137	-	90	70.968	Maylandia_zebra
ENSSPAG00000009485	-	96	77.063	ENSMMOG00000005728	-	99	85.784	Mola_mola
ENSSPAG00000009485	-	99	43.694	ENSMMOG00000019526	-	93	43.602	Mola_mola
ENSSPAG00000009485	-	100	84.070	ENSMALG00000010501	-	100	83.864	Monopterus_albus
ENSSPAG00000009485	-	64	53.155	ENSNBRG00000012175	-	90	71.613	Neolamprologus_brichardi
ENSSPAG00000009485	-	100	88.181	ENSNBRG00000006978	-	100	88.284	Neolamprologus_brichardi
ENSSPAG00000009485	-	100	89.620	ENSONIG00000012268	-	100	89.825	Oreochromis_niloticus
ENSSPAG00000009485	-	86	79.570	ENSORLG00000029243	-	97	80.760	Oryzias_latipes
ENSSPAG00000009485	-	100	75.540	ENSORLG00020017005	-	100	75.951	Oryzias_latipes_hni
ENSSPAG00000009485	-	100	75.951	ENSORLG00015015211	-	100	75.537	Oryzias_latipes_hsok
ENSSPAG00000009485	-	100	77.184	ENSOMEG00000006666	-	100	77.026	Oryzias_melastigma
ENSSPAG00000009485	-	57	80.255	ENSPMGG00000009790	-	88	82.781	Periophthalmus_magnuspinnatus
ENSSPAG00000009485	-	50	59.838	ENSPMGG00000020126	-	50	60.381	Periophthalmus_magnuspinnatus
ENSSPAG00000009485	-	100	77.128	ENSPLAG00000009867	-	100	76.278	Poecilia_latipinna
ENSSPAG00000009485	-	100	77.618	ENSPMEG00000006624	-	100	76.585	Poecilia_mexicana
ENSSPAG00000009485	-	100	77.492	ENSPREG00000010838	-	100	76.742	Poecilia_reticulata
ENSSPAG00000009485	-	98	43.526	ENSPREG00000001607	-	73	80.263	Poecilia_reticulata
ENSSPAG00000009485	-	99	46.161	ENSSMAG00000007258	-	99	46.236	Scophthalmus_maximus
ENSSPAG00000009485	-	100	85.817	ENSSMAG00000007545	-	100	84.954	Scophthalmus_maximus
ENSSPAG00000009485	-	100	89.344	ENSSDUG00000021864	-	100	89.959	Seriola_dumerili
ENSSPAG00000009485	-	84	50.530	ENSSDUG00000013237	-	90	66.887	Seriola_dumerili
ENSSPAG00000009485	-	85	50.000	ENSSLDG00000004886	-	99	46.425	Seriola_lalandi_dorsalis
ENSSPAG00000009485	-	100	89.857	ENSSLDG00000012268	-	100	90.061	Seriola_lalandi_dorsalis
ENSSPAG00000009485	-	99	78.064	ENSTRUG00000022519	-	99	77.926	Takifugu_rubripes
ENSSPAG00000009485	-	61	78.073	ENSTNIG00000014519	-	97	87.805	Tetraodon_nigroviridis
ENSSPAG00000009485	-	100	77.184	ENSXMAG00000027171	-	100	76.876	Xiphophorus_maculatus
ENSSPAG00000009485	-	82	48.242	ENSXMAG00000014715	-	83	81.304	Xiphophorus_maculatus