EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000009507 (Gene tree)
Gene ID: 103359036
Gene Symbol: srrm1
Alias: wu:fb34f04|wu:fb38b06|zgc:63802
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 11221 bases
Position: chrKK580422.1:510817-522037
Accession: 103359036
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000012517	PWI	PF01480.17	8.3e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000012732	-	3713	XM_008284212	ENSSPAP00000012517	864 (aa)	XP_008282434	UPI000498461B

Gene Model

Click here to download ENSSPAG00000009507's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000009507's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000009507	srrm1	100	95.023	ENSAPOG00000001170	srrm1	99	100.000	Acanthochromis_polyacanthus
ENSSPAG00000009507	srrm1	100	94.329	ENSAOCG00000021757	srrm1	100	94.329	Amphiprion_ocellaris
ENSSPAG00000009507	srrm1	100	93.634	ENSAPEG00000018964	srrm1	100	93.634	Amphiprion_percula
ENSSPAG00000009507	srrm1	60	91.120	ENSATEG00000007659	srrm1	100	86.806	Anabas_testudineus
ENSSPAG00000009507	srrm1	58	48.350	ENSDARG00000001244	srrm1	99	96.154	Danio_rerio
ENSSPAG00000009507	srrm1	60	82.081	ENSGACG00000007266	srrm1	100	70.333	Gasterosteus_aculeatus
ENSSPAG00000009507	srrm1	58	82.800	ENSHBUG00000020364	srrm1	63	82.800	Haplochromis_burtoni
ENSSPAG00000009507	srrm1	58	85.170	ENSLBEG00000013936	srrm1	58	85.170	Labrus_bergylta
ENSSPAG00000009507	srrm1	60	92.278	ENSMAMG00000010305	srrm1	100	87.963	Mastacembelus_armatus
ENSSPAG00000009507	srrm1	58	83.400	ENSONIG00000008206	srrm1	54	81.000	Oreochromis_niloticus
ENSSPAG00000009507	srrm1	100	76.037	ENSORLG00015014743	srrm1	100	76.267	Oryzias_latipes_hsok
ENSSPAG00000009507	srrm1	67	79.505	ENSPKIG00000008252	srrm1	63	77.273	Paramormyrops_kingsleyae
ENSSPAG00000009507	srrm1	60	94.595	ENSSDUG00000012967	srrm1	100	90.046	Seriola_dumerili
ENSSPAG00000009507	srrm1	60	94.402	ENSSLDG00000012771	srrm1	100	88.208	Seriola_lalandi_dorsalis
ENSSPAG00000009507	srrm1	100	72.910	ENSTRUG00000002519	srrm1	100	77.483	Takifugu_rubripes
ENSSPAG00000009507	srrm1	99	69.911	ENSTNIG00000016909	srrm1	100	74.739	Tetraodon_nigroviridis