EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000009723 (Gene tree)
Gene ID: 103359553
Gene Symbol: rbfox1
Alias: a2bp1|zgc:103635
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 68567 bases
Position: chrKK580452.1:236828-305394
Accession: 103359553
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000012996	Fox-1_C	PF12414.8	3e-37	1	1
ENSSPAP00000012941	Fox-1_C	PF12414.8	2.9e-25	1	2
ENSSPAP00000012941	Fox-1_C	PF12414.8	2.9e-25	2	2
ENSSPAP00000012956	Fox-1_C	PF12414.8	2.2e-24	1	2
ENSSPAP00000012956	Fox-1_C	PF12414.8	2.2e-24	2	2
ENSSPAP00000012941	RRM_1	PF00076.22	1.2e-17	1	1
ENSSPAP00000012956	RRM_1	PF00076.22	1.3e-17	1	1
ENSSPAP00000012996	RRM_1	PF00076.22	1.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000013216	-	1128	XM_008284947	ENSSPAP00000012996	375 (aa)	XP_008283169	-
ENSSPAT00000013175	-	1083	-	ENSSPAP00000012956	360 (aa)	-	-
ENSSPAT00000013160	-	1044	-	ENSSPAP00000012941	347 (aa)	-	-

Gene Model

Click here to download ENSSPAG00000009723's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000009723's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000009723	rbfox1	68	65.018	ENSSPAG00000013681	rbfox2	63	61.709
ENSSPAG00000009723	rbfox1	93	50.392	ENSSPAG00000016272	-	78	51.683
ENSSPAG00000009723	rbfox1	85	55.700	ENSSPAG00000016620	rbfox1l	90	49.742
ENSSPAG00000009723	rbfox1	75	63.158	ENSSPAG00000004898	-	85	62.667
ENSSPAG00000009723	rbfox1	89	63.385	ENSSPAG00000017571	rbfox3b	87	65.064

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000009723	rbfox1	100	81.003	ENSG00000078328	RBFOX1	98	81.266	Homo_sapiens
ENSSPAG00000009723	rbfox1	100	98.681	ENSAPOG00000003197	rbfox1	98	98.681	Acanthochromis_polyacanthus
ENSSPAG00000009723	rbfox1	61	78.140	ENSAMEG00000008605	RBFOX1	92	74.678	Ailuropoda_melanoleuca
ENSSPAG00000009723	rbfox1	69	70.447	ENSACIG00000005478	rbfox1	68	75.093	Amphilophus_citrinellus
ENSSPAG00000009723	rbfox1	74	97.842	ENSAOCG00000008283	rbfox1	95	97.842	Amphiprion_ocellaris
ENSSPAG00000009723	rbfox1	96	88.000	ENSAPEG00000010636	rbfox1	100	88.000	Amphiprion_percula
ENSSPAG00000009723	rbfox1	74	92.500	ENSATEG00000007513	rbfox1	95	92.143	Anabas_testudineus
ENSSPAG00000009723	rbfox1	100	76.601	ENSAPLG00000013263	RBFOX1	97	76.847	Anas_platyrhynchos
ENSSPAG00000009723	rbfox1	100	74.083	ENSACAG00000004013	RBFOX1	98	74.083	Anolis_carolinensis
ENSSPAG00000009723	rbfox1	100	81.530	ENSANAG00000029527	RBFOX1	100	78.571	Aotus_nancymaae
ENSSPAG00000009723	rbfox1	61	80.180	ENSAMXG00000002431	rbfox1	63	80.822	Astyanax_mexicanus
ENSSPAG00000009723	rbfox1	100	73.464	ENSBTAG00000007210	RBFOX1	97	73.710	Bos_taurus
ENSSPAG00000009723	rbfox1	100	79.737	ENSCJAG00000017351	RBFOX1	96	78.628	Callithrix_jacchus
ENSSPAG00000009723	rbfox1	100	74.201	ENSCAFG00000019082	RBFOX1	96	72.906	Canis_familiaris
ENSSPAG00000009723	rbfox1	71	69.930	ENSCAFG00020024881	RBFOX1	82	68.707	Canis_lupus_dingo
ENSSPAG00000009723	rbfox1	100	73.464	ENSCHIG00000023549	RBFOX1	97	73.710	Capra_hircus
ENSSPAG00000009723	rbfox1	100	81.266	ENSTSYG00000005334	RBFOX1	100	81.530	Carlito_syrichta
ENSSPAG00000009723	rbfox1	100	76.108	ENSCAPG00000017669	RBFOX1	100	76.355	Cavia_aperea
ENSSPAG00000009723	rbfox1	100	76.108	ENSCPOG00000011314	RBFOX1	99	76.355	Cavia_porcellus
ENSSPAG00000009723	rbfox1	100	81.530	ENSCCAG00000023031	RBFOX1	100	78.571	Cebus_capucinus
ENSSPAG00000009723	rbfox1	100	81.003	ENSCATG00000033816	RBFOX1	100	78.042	Cercocebus_atys
ENSSPAG00000009723	rbfox1	100	75.862	ENSCLAG00000012761	RBFOX1	98	76.108	Chinchilla_lanigera
ENSSPAG00000009723	rbfox1	83	72.941	ENSCSAG00000008739	RBFOX1	86	73.235	Chlorocebus_sabaeus
ENSSPAG00000009723	rbfox1	76	90.769	ENSCHOG00000012843	RBFOX1	65	90.769	Choloepus_hoffmanni
ENSSPAG00000009723	rbfox1	100	82.058	ENSCPBG00000026626	RBFOX1	97	74.939	Chrysemys_picta_bellii
ENSSPAG00000009723	rbfox1	100	81.003	ENSCANG00000033125	RBFOX1	100	78.042	Colobus_angolensis_palliatus
ENSSPAG00000009723	rbfox1	100	75.123	ENSCGRG00001013729	Rbfox1	98	75.369	Cricetulus_griseus_chok1gshd
ENSSPAG00000009723	rbfox1	100	75.123	ENSCGRG00000003272	Rbfox1	98	75.369	Cricetulus_griseus_crigri
ENSSPAG00000009723	rbfox1	97	84.324	ENSCSEG00000008840	rbfox1	100	84.054	Cynoglossus_semilaevis
ENSSPAG00000009723	rbfox1	100	81.842	ENSDARG00000014746	rbfox1	100	80.193	Danio_rerio
ENSSPAG00000009723	rbfox1	100	75.862	ENSDNOG00000043612	RBFOX1	93	76.108	Dasypus_novemcinctus
ENSSPAG00000009723	rbfox1	100	74.384	ENSDORG00000010024	Rbfox1	97	75.616	Dipodomys_ordii
ENSSPAG00000009723	rbfox1	100	63.882	ENSETEG00000003771	RBFOX1	96	62.562	Echinops_telfairi
ENSSPAG00000009723	rbfox1	100	76.108	ENSEASG00005011599	RBFOX1	97	74.447	Equus_asinus_asinus
ENSSPAG00000009723	rbfox1	100	74.807	ENSECAG00000012667	RBFOX1	93	73.008	Equus_caballus
ENSSPAG00000009723	rbfox1	98	60.997	ENSELUG00000013096	rbfox1	66	82.234	Esox_lucius
ENSSPAG00000009723	rbfox1	100	81.266	ENSFCAG00000025322	RBFOX1	88	81.530	Felis_catus
ENSSPAG00000009723	rbfox1	83	73.824	ENSFALG00000004027	RBFOX1	97	74.118	Ficedula_albicollis
ENSSPAG00000009723	rbfox1	100	75.862	ENSFDAG00000007388	RBFOX1	98	76.108	Fukomys_damarensis
ENSSPAG00000009723	rbfox1	100	73.956	ENSGALG00000034325	RBFOX1	95	73.632	Gallus_gallus
ENSSPAG00000009723	rbfox1	100	80.000	ENSGAGG00000023681	RBFOX1	100	77.157	Gopherus_agassizii
ENSSPAG00000009723	rbfox1	100	81.003	ENSGGOG00000016871	-	100	78.042	Gorilla_gorilla
ENSSPAG00000009723	rbfox1	100	75.862	ENSHGLG00000016944	RBFOX1	98	76.108	Heterocephalus_glaber_female
ENSSPAG00000009723	rbfox1	100	75.862	ENSHGLG00100003272	RBFOX1	98	76.108	Heterocephalus_glaber_male
ENSSPAG00000009723	rbfox1	86	83.939	ENSHCOG00000016419	rbfox1	91	84.242	Hippocampus_comes
ENSSPAG00000009723	rbfox1	98	85.924	ENSIPUG00000015215	rbfox1	100	83.106	Ictalurus_punctatus
ENSSPAG00000009723	rbfox1	100	76.108	ENSSTOG00000000322	RBFOX1	98	76.355	Ictidomys_tridecemlineatus
ENSSPAG00000009723	rbfox1	100	75.616	ENSJJAG00000002575	Rbfox1	98	74.631	Jaculus_jaculus
ENSSPAG00000009723	rbfox1	97	92.643	ENSLBEG00000014659	rbfox1	97	93.151	Labrus_bergylta
ENSSPAG00000009723	rbfox1	100	76.773	ENSLOCG00000006675	rbfox1	98	77.017	Lepisosteus_oculatus
ENSSPAG00000009723	rbfox1	74	82.201	ENSLAFG00000011480	RBFOX1	100	82.201	Loxodonta_africana
ENSSPAG00000009723	rbfox1	100	81.003	ENSMFAG00000036447	RBFOX1	100	78.042	Macaca_fascicularis
ENSSPAG00000009723	rbfox1	100	81.003	ENSMMUG00000003458	RBFOX1	100	78.042	Macaca_mulatta
ENSSPAG00000009723	rbfox1	100	73.710	ENSMNEG00000032034	RBFOX1	96	72.414	Macaca_nemestrina
ENSSPAG00000009723	rbfox1	100	81.003	ENSMLEG00000015382	RBFOX1	100	78.042	Mandrillus_leucophaeus
ENSSPAG00000009723	rbfox1	97	91.553	ENSMAMG00000003142	rbfox1	100	91.281	Mastacembelus_armatus
ENSSPAG00000009723	rbfox1	72	74.552	ENSMGAG00000008606	RBFOX1	96	73.852	Meleagris_gallopavo
ENSSPAG00000009723	rbfox1	98	45.404	ENSMAUG00000020570	Rbfox1	95	44.658	Mesocricetus_auratus
ENSSPAG00000009723	rbfox1	100	80.739	ENSMICG00000034286	RBFOX1	100	77.778	Microcebus_murinus
ENSSPAG00000009723	rbfox1	100	75.369	ENSMOCG00000020932	Rbfox1	99	76.000	Microtus_ochrogaster
ENSSPAG00000009723	rbfox1	85	93.878	ENSMMOG00000009716	rbfox1	86	93.197	Mola_mola
ENSSPAG00000009723	rbfox1	79	74.085	ENSMODG00000005826	RBFOX1	88	74.390	Monodelphis_domestica
ENSSPAG00000009723	rbfox1	100	90.765	ENSMALG00000003337	rbfox1	98	90.501	Monopterus_albus
ENSSPAG00000009723	rbfox1	100	75.369	MGP_CAROLIEiJ_G0020427	Rbfox1	98	75.616	Mus_caroli
ENSSPAG00000009723	rbfox1	100	75.616	ENSMUSG00000008658	Rbfox1	99	87.121	Mus_musculus
ENSSPAG00000009723	rbfox1	100	75.369	MGP_PahariEiJ_G0016135	Rbfox1	98	75.616	Mus_pahari
ENSSPAG00000009723	rbfox1	100	75.369	MGP_SPRETEiJ_G0021321	Rbfox1	98	75.616	Mus_spretus
ENSSPAG00000009723	rbfox1	83	72.647	ENSMPUG00000014822	RBFOX1	82	72.941	Mustela_putorius_furo
ENSSPAG00000009723	rbfox1	74	82.468	ENSMLUG00000015896	RBFOX1	100	82.468	Myotis_lucifugus
ENSSPAG00000009723	rbfox1	100	75.616	ENSNGAG00000023276	Rbfox1	100	75.862	Nannospalax_galili
ENSSPAG00000009723	rbfox1	99	70.149	ENSNBRG00000011084	rbfox1	93	69.652	Neolamprologus_brichardi
ENSSPAG00000009723	rbfox1	100	80.739	ENSNLEG00000010017	-	100	77.778	Nomascus_leucogenys
ENSSPAG00000009723	rbfox1	81	93.846	ENSMEUG00000012525	RBFOX1	70	93.846	Notamacropus_eugenii
ENSSPAG00000009723	rbfox1	74	97.500	ENSOPRG00000006199	-	75	75.983	Ochotona_princeps
ENSSPAG00000009723	rbfox1	100	76.108	ENSODEG00000013166	RBFOX1	98	76.355	Octodon_degus
ENSSPAG00000009723	rbfox1	83	72.941	ENSOANG00000002379	RBFOX1	86	73.235	Ornithorhynchus_anatinus
ENSSPAG00000009723	rbfox1	61	79.535	ENSOCUG00000001205	-	97	77.828	Oryctolagus_cuniculus
ENSSPAG00000009723	rbfox1	100	75.616	ENSOGAG00000025535	RBFOX1	98	75.862	Otolemur_garnettii
ENSSPAG00000009723	rbfox1	61	67.442	ENSOARG00000005135	RBFOX1	85	65.611	Ovis_aries
ENSSPAG00000009723	rbfox1	100	81.003	ENSPPAG00000036238	-	100	81.266	Pan_paniscus
ENSSPAG00000009723	rbfox1	100	81.266	ENSPPRG00000006546	RBFOX1	100	78.307	Panthera_pardus
ENSSPAG00000009723	rbfox1	100	69.948	ENSPTIG00000021154	RBFOX1	99	68.895	Panthera_tigris_altaica
ENSSPAG00000009723	rbfox1	100	81.003	ENSPTRG00000007744	RBFOX1	100	78.042	Pan_troglodytes
ENSSPAG00000009723	rbfox1	100	81.003	ENSPANG00000026500	RBFOX1	100	78.042	Papio_anubis
ENSSPAG00000009723	rbfox1	100	81.266	ENSPKIG00000009667	-	95	82.022	Paramormyrops_kingsleyae
ENSSPAG00000009723	rbfox1	70	82.996	ENSPKIG00000019353	rbfox1	89	79.636	Paramormyrops_kingsleyae
ENSSPAG00000009723	rbfox1	100	76.601	ENSPSIG00000006523	RBFOX1	97	76.847	Pelodiscus_sinensis
ENSSPAG00000009723	rbfox1	100	75.369	ENSPEMG00000017607	Rbfox1	98	75.616	Peromyscus_maniculatus_bairdii
ENSSPAG00000009723	rbfox1	71	78.169	ENSPCIG00000026887	RBFOX1	100	80.634	Phascolarctos_cinereus
ENSSPAG00000009723	rbfox1	83	72.941	ENSPPYG00000007079	-	82	73.235	Pongo_abelii
ENSSPAG00000009723	rbfox1	89	65.940	ENSPCAG00000002630	RBFOX1	96	63.115	Procavia_capensis
ENSSPAG00000009723	rbfox1	100	81.003	ENSPCOG00000025687	RBFOX1	100	78.042	Propithecus_coquereli
ENSSPAG00000009723	rbfox1	100	70.516	ENSPVAG00000013467	RBFOX1	95	69.727	Pteropus_vampyrus
ENSSPAG00000009723	rbfox1	97	79.275	ENSPNAG00000023109	rbfox1	100	78.756	Pygocentrus_nattereri
ENSSPAG00000009723	rbfox1	100	75.123	ENSRNOG00000002827	Rbfox1	93	75.369	Rattus_norvegicus
ENSSPAG00000009723	rbfox1	100	81.003	ENSRBIG00000044478	RBFOX1	100	81.266	Rhinopithecus_bieti
ENSSPAG00000009723	rbfox1	100	81.003	ENSRROG00000044411	RBFOX1	100	78.042	Rhinopithecus_roxellana
ENSSPAG00000009723	rbfox1	100	81.530	ENSSBOG00000033726	RBFOX1	100	78.836	Saimiri_boliviensis_boliviensis
ENSSPAG00000009723	rbfox1	100	76.355	ENSSHAG00000009257	RBFOX1	98	76.601	Sarcophilus_harrisii
ENSSPAG00000009723	rbfox1	98	75.219	ENSSFOG00015023675	rbfox1	97	74.352	Scleropages_formosus
ENSSPAG00000009723	rbfox1	89	71.302	ENSSFOG00015009955	-	85	71.137	Scleropages_formosus
ENSSPAG00000009723	rbfox1	100	93.684	ENSSMAG00000015505	rbfox1	94	93.529	Scophthalmus_maximus
ENSSPAG00000009723	rbfox1	100	92.000	ENSSDUG00000016413	rbfox1	99	93.372	Seriola_dumerili
ENSSPAG00000009723	rbfox1	85	92.953	ENSSLDG00000009353	rbfox1	95	94.667	Seriola_lalandi_dorsalis
ENSSPAG00000009723	rbfox1	85	78.914	ENSSPUG00000009732	RBFOX1	87	79.421	Sphenodon_punctatus
ENSSPAG00000009723	rbfox1	97	74.809	ENSSSCG00000007917	RBFOX1	91	75.064	Sus_scrofa
ENSSPAG00000009723	rbfox1	100	76.847	ENSTGUG00000004562	RBFOX1	99	77.094	Taeniopygia_guttata
ENSSPAG00000009723	rbfox1	100	92.084	ENSTRUG00000020940	rbfox1	99	92.348	Takifugu_rubripes
ENSSPAG00000009723	rbfox1	63	67.247	ENSTNIG00000002567	rbfox1	100	69.338	Tetraodon_nigroviridis
ENSSPAG00000009723	rbfox1	65	88.971	ENSTBEG00000009169	-	56	88.235	Tupaia_belangeri
ENSSPAG00000009723	rbfox1	100	73.710	ENSTTRG00000005700	RBFOX1	95	73.134	Tursiops_truncatus
ENSSPAG00000009723	rbfox1	99	77.394	ENSUAMG00000024633	RBFOX1	100	79.942	Ursus_americanus
ENSSPAG00000009723	rbfox1	99	72.022	ENSUMAG00000003579	RBFOX1	99	69.189	Ursus_maritimus
ENSSPAG00000009723	rbfox1	74	79.612	ENSVPAG00000001284	RBFOX1	74	79.612	Vicugna_pacos
ENSSPAG00000009723	rbfox1	100	81.530	ENSVVUG00000017311	RBFOX1	88	81.794	Vulpes_vulpes