EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000009830 (Gene tree)
Gene ID: 103373555
Gene Symbol: -
Alias: -
Full Name: PR/SET domain 1
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 8031 bases
Position: chrKK582081.1:23073-31103
Accession: 103373555
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000012975	zf-C2H2	PF00096.26	1.5e-16	1	3
ENSSPAP00000012975	zf-C2H2	PF00096.26	1.5e-16	2	3
ENSSPAP00000012975	zf-C2H2	PF00096.26	1.5e-16	3	3
ENSSPAP00000012975	zf-met	PF12874.7	5.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000013194	-	2322	XM_008303459	ENSSPAP00000012975	773 (aa)	XP_008301681	UPI000494DFFE

Gene Model

Click here to download ENSSPAG00000009830's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000009830's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000009830	-	72	39.160	ENSSPAG00000000803	prdm1b	91	38.844

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000009830	-	100	87.564	ENSAPOG00000014135	-	100	87.564	Acanthochromis_polyacanthus
ENSSPAG00000009830	-	73	40.098	ENSACIG00000014426	prdm1b	87	40.098	Amphilophus_citrinellus
ENSSPAG00000009830	-	100	77.707	ENSACIG00000009747	-	100	77.707	Amphilophus_citrinellus
ENSSPAG00000009830	-	78	39.130	ENSAOCG00000002230	prdm1b	96	39.873	Amphiprion_ocellaris
ENSSPAG00000009830	-	90	40.871	ENSAPEG00000019826	prdm1b	94	40.972	Amphiprion_percula
ENSSPAG00000009830	-	98	76.774	ENSATEG00000014034	-	99	76.774	Anabas_testudineus
ENSSPAG00000009830	-	75	39.677	ENSATEG00000006924	prdm1b	88	40.097	Anabas_testudineus
ENSSPAG00000009830	-	94	44.625	ENSATEG00000021017	prdm1a	99	45.105	Anabas_testudineus
ENSSPAG00000009830	-	81	37.348	ENSACLG00000005487	prdm1b	91	37.519	Astatotilapia_calliptera
ENSSPAG00000009830	-	99	42.683	ENSCSEG00000009707	prdm1a	99	45.704	Cynoglossus_semilaevis
ENSSPAG00000009830	-	58	53.846	ENSCVAG00000016746	prdm1b	93	40.082	Cyprinodon_variegatus
ENSSPAG00000009830	-	99	43.349	ENSCVAG00000019081	prdm1a	99	46.305	Cyprinodon_variegatus
ENSSPAG00000009830	-	80	37.594	ENSFHEG00000019848	prdm1b	96	37.594	Fundulus_heteroclitus
ENSSPAG00000009830	-	91	40.552	ENSGAFG00000016191	prdm1b	91	40.552	Gambusia_affinis
ENSSPAG00000009830	-	99	69.123	ENSGAFG00000013012	-	99	69.123	Gambusia_affinis
ENSSPAG00000009830	-	53	55.078	ENSGACG00000002716	prdm1b	59	55.078	Gasterosteus_aculeatus
ENSSPAG00000009830	-	80	37.577	ENSHBUG00000001475	prdm1b	97	37.577	Haplochromis_burtoni
ENSSPAG00000009830	-	65	53.416	ENSIPUG00000013740	prdm1b	79	53.416	Ictalurus_punctatus
ENSSPAG00000009830	-	99	73.571	ENSKMAG00000016247	-	99	73.571	Kryptolebias_marmoratus
ENSSPAG00000009830	-	93	45.269	ENSKMAG00000017597	prdm1a	95	45.946	Kryptolebias_marmoratus
ENSSPAG00000009830	-	78	37.937	ENSKMAG00000011218	prdm1b	93	37.778	Kryptolebias_marmoratus
ENSSPAG00000009830	-	93	39.840	ENSLBEG00000020955	prdm1b	96	39.840	Labrus_bergylta
ENSSPAG00000009830	-	63	55.634	ENSLOCG00000004978	prdm1b	61	55.634	Lepisosteus_oculatus
ENSSPAG00000009830	-	77	37.898	ENSMZEG00005026361	prdm1b	89	37.898	Maylandia_zebra
ENSSPAG00000009830	-	79	38.389	ENSMMOG00000013458	prdm1b	94	38.389	Mola_mola
ENSSPAG00000009830	-	74	38.399	ENSMALG00000011410	prdm1b	89	38.399	Monopterus_albus
ENSSPAG00000009830	-	98	77.361	ENSMALG00000000462	-	99	77.361	Monopterus_albus
ENSSPAG00000009830	-	100	77.411	ENSONIG00000014709	-	100	77.411	Oreochromis_niloticus
ENSSPAG00000009830	-	75	50.246	ENSONIG00000013583	prdm1b	63	56.250	Oreochromis_niloticus
ENSSPAG00000009830	-	51	55.061	ENSPKIG00000022335	prdm1b	69	53.750	Paramormyrops_kingsleyae
ENSSPAG00000009830	-	57	55.777	ENSPFOG00000003103	prdm1b	68	55.777	Poecilia_formosa
ENSSPAG00000009830	-	79	37.672	ENSPLAG00000018491	prdm1b	92	37.672	Poecilia_latipinna
ENSSPAG00000009830	-	79	38.043	ENSPMEG00000007869	prdm1b	92	38.043	Poecilia_mexicana
ENSSPAG00000009830	-	79	37.519	ENSPREG00000011327	prdm1b	92	37.519	Poecilia_reticulata
ENSSPAG00000009830	-	95	42.074	ENSPVAG00000011732	PRDM1	99	42.193	Pteropus_vampyrus
ENSSPAG00000009830	-	92	45.932	ENSPNAG00000028442	prdm1a	91	45.932	Pygocentrus_nattereri
ENSSPAG00000009830	-	52	56.735	ENSSFOG00015021896	prdm1b	60	56.735	Scleropages_formosus
ENSSPAG00000009830	-	100	75.126	ENSSMAG00000017518	-	100	75.126	Scophthalmus_maximus
ENSSPAG00000009830	-	91	42.424	ENSSMAG00000020467	prdm1b	92	40.293	Scophthalmus_maximus
ENSSPAG00000009830	-	74	38.640	ENSSDUG00000020610	prdm1b	87	38.640	Seriola_dumerili
ENSSPAG00000009830	-	100	81.013	ENSSDUG00000000524	-	100	81.013	Seriola_dumerili
ENSSPAG00000009830	-	86	40.000	ENSSLDG00000021973	prdm1b	88	40.000	Seriola_lalandi_dorsalis
ENSSPAG00000009830	-	100	81.519	ENSSLDG00000001957	-	100	81.519	Seriola_lalandi_dorsalis
ENSSPAG00000009830	-	79	42.980	ENSTNIG00000003926	prdm1a	99	43.804	Tetraodon_nigroviridis
ENSSPAG00000009830	-	93	40.483	ENSXCOG00000018920	prdm1b	93	40.483	Xiphophorus_couchianus
ENSSPAG00000009830	-	91	40.890	ENSXMAG00000016765	prdm1b	89	40.890	Xiphophorus_maculatus