EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000009888 (Gene tree)
Gene ID: 103368536
Gene Symbol: ddb1
Alias: zgc:63840
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 72150 bases
Position: chrKK581241.1:230113-302262
Accession: 103368536
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000013106	CPSF_A	PF03178.15	1.9e-76	1	1
ENSSPAP00000013163	CPSF_A	PF03178.15	2.1e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000013386	-	2898	-	ENSSPAP00000013163	965 (aa)	-	-
ENSSPAT00000013327	-	3935	XM_008296942	ENSSPAP00000013106	1085 (aa)	XP_008295164	-

Gene Model

Click here to download ENSSPAG00000009888's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000009888's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000009888	ddb1	99	91.612	ENSG00000167986	DDB1	100	96.575	Homo_sapiens
ENSSPAG00000009888	ddb1	99	99.535	ENSAPOG00000005036	ddb1	99	99.796	Acanthochromis_polyacanthus
ENSSPAG00000009888	ddb1	99	91.628	ENSAMEG00000016518	DDB1	94	91.628	Ailuropoda_melanoleuca
ENSSPAG00000009888	ddb1	100	95.723	ENSACIG00000020624	ddb1	99	98.878	Amphilophus_citrinellus
ENSSPAG00000009888	ddb1	99	99.442	ENSAOCG00000003066	ddb1	94	99.442	Amphiprion_ocellaris
ENSSPAG00000009888	ddb1	99	99.721	ENSAPEG00000000092	ddb1	99	99.721	Amphiprion_percula
ENSSPAG00000009888	ddb1	99	99.535	ENSATEG00000020571	ddb1	97	99.535	Anabas_testudineus
ENSSPAG00000009888	ddb1	98	90.368	ENSAPLG00000007174	DDB1	93	90.368	Anas_platyrhynchos
ENSSPAG00000009888	ddb1	99	90.791	ENSACAG00000017758	DDB1	94	90.791	Anolis_carolinensis
ENSSPAG00000009888	ddb1	99	91.535	ENSANAG00000021878	DDB1	94	91.535	Aotus_nancymaae
ENSSPAG00000009888	ddb1	99	98.512	ENSACLG00000012401	ddb1	99	98.210	Astatotilapia_calliptera
ENSSPAG00000009888	ddb1	99	91.535	ENSBTAG00000021569	DDB1	88	91.535	Bos_taurus
ENSSPAG00000009888	ddb1	100	36.462	WBGene00010890	ddb-1	94	37.296	Caenorhabditis_elegans
ENSSPAG00000009888	ddb1	99	91.535	ENSCJAG00000019319	DDB1	94	91.535	Callithrix_jacchus
ENSSPAG00000009888	ddb1	99	91.907	ENSCAFG00000016264	DDB1	99	91.907	Canis_familiaris
ENSSPAG00000009888	ddb1	99	91.907	ENSCAFG00020012722	DDB1	99	91.907	Canis_lupus_dingo
ENSSPAG00000009888	ddb1	99	91.535	ENSCHIG00000014969	DDB1	94	91.535	Capra_hircus
ENSSPAG00000009888	ddb1	99	91.163	ENSTSYG00000008027	DDB1	94	91.163	Carlito_syrichta
ENSSPAG00000009888	ddb1	97	91.366	ENSCAPG00000010786	DDB1	94	91.366	Cavia_aperea
ENSSPAG00000009888	ddb1	99	91.349	ENSCPOG00000009956	DDB1	94	91.349	Cavia_porcellus
ENSSPAG00000009888	ddb1	99	91.535	ENSCCAG00000035883	DDB1	94	91.535	Cebus_capucinus
ENSSPAG00000009888	ddb1	99	89.639	ENSCATG00000044495	DDB1	94	89.639	Cercocebus_atys
ENSSPAG00000009888	ddb1	99	91.442	ENSCLAG00000004126	DDB1	94	91.442	Chinchilla_lanigera
ENSSPAG00000009888	ddb1	99	91.535	ENSCSAG00000006392	DDB1	94	91.535	Chlorocebus_sabaeus
ENSSPAG00000009888	ddb1	82	91.667	ENSCHOG00000011377	DDB1	86	84.082	Choloepus_hoffmanni
ENSSPAG00000009888	ddb1	99	91.070	ENSCPBG00000017728	DDB1	94	91.070	Chrysemys_picta_bellii
ENSSPAG00000009888	ddb1	99	61.178	ENSCING00000007437	-	94	61.178	Ciona_intestinalis
ENSSPAG00000009888	ddb1	93	60.609	ENSCSAVG00000004783	-	100	60.285	Ciona_savignyi
ENSSPAG00000009888	ddb1	99	91.535	ENSCANG00000019948	DDB1	94	91.535	Colobus_angolensis_palliatus
ENSSPAG00000009888	ddb1	99	91.628	ENSCGRG00001016599	Ddb1	98	90.765	Cricetulus_griseus_chok1gshd
ENSSPAG00000009888	ddb1	99	91.628	ENSCGRG00000013427	Ddb1	94	91.628	Cricetulus_griseus_crigri
ENSSPAG00000009888	ddb1	98	98.775	ENSCSEG00000012499	ddb1	99	97.065	Cynoglossus_semilaevis
ENSSPAG00000009888	ddb1	99	97.858	ENSCVAG00000019531	ddb1	99	97.858	Cyprinodon_variegatus
ENSSPAG00000009888	ddb1	99	92.537	ENSDARG00000074431	ddb1	94	92.537	Danio_rerio
ENSSPAG00000009888	ddb1	99	91.907	ENSDNOG00000014884	DDB1	97	91.907	Dasypus_novemcinctus
ENSSPAG00000009888	ddb1	82	95.455	ENSDORG00000000127	Ddb1	93	95.455	Dipodomys_ordii
ENSSPAG00000009888	ddb1	75	30.065	FBgn0024698	Cpsf160	63	30.065	Drosophila_melanogaster
ENSSPAG00000009888	ddb1	100	60.550	FBgn0260962	pic	95	60.550	Drosophila_melanogaster
ENSSPAG00000009888	ddb1	68	95.276	ENSETEG00000001053	-	64	95.276	Echinops_telfairi
ENSSPAG00000009888	ddb1	90	81.573	ENSEBUG00000014593	ddb1	97	84.364	Eptatretus_burgeri
ENSSPAG00000009888	ddb1	99	91.628	ENSEASG00005008184	DDB1	94	91.628	Equus_asinus_asinus
ENSSPAG00000009888	ddb1	99	91.628	ENSECAG00000012136	DDB1	94	91.628	Equus_caballus
ENSSPAG00000009888	ddb1	89	87.542	ENSEEUG00000003194	DDB1	85	87.542	Erinaceus_europaeus
ENSSPAG00000009888	ddb1	99	97.209	ENSELUG00000023868	ddb1	94	97.209	Esox_lucius
ENSSPAG00000009888	ddb1	99	91.628	ENSFCAG00000029716	DDB1	94	91.628	Felis_catus
ENSSPAG00000009888	ddb1	99	90.977	ENSFALG00000011981	DDB1	94	90.977	Ficedula_albicollis
ENSSPAG00000009888	ddb1	99	91.442	ENSFDAG00000005128	DDB1	94	91.442	Fukomys_damarensis
ENSSPAG00000009888	ddb1	88	98.947	ENSFHEG00000022133	ddb1	93	98.370	Fundulus_heteroclitus
ENSSPAG00000009888	ddb1	83	98.662	ENSGMOG00000019386	ddb1	94	98.662	Gadus_morhua
ENSSPAG00000009888	ddb1	99	90.977	ENSGALG00000042333	DDB1	94	90.977	Gallus_gallus
ENSSPAG00000009888	ddb1	99	98.510	ENSGAFG00000013142	ddb1	99	98.510	Gambusia_affinis
ENSSPAG00000009888	ddb1	99	98.785	ENSGACG00000017182	ddb1	98	98.785	Gasterosteus_aculeatus
ENSSPAG00000009888	ddb1	94	90.873	ENSGAGG00000014124	DDB1	94	90.873	Gopherus_agassizii
ENSSPAG00000009888	ddb1	99	91.535	ENSGGOG00000004052	DDB1	94	91.535	Gorilla_gorilla
ENSSPAG00000009888	ddb1	99	98.512	ENSHBUG00000008873	ddb1	94	98.512	Haplochromis_burtoni
ENSSPAG00000009888	ddb1	99	91.442	ENSHGLG00000018430	DDB1	94	91.442	Heterocephalus_glaber_female
ENSSPAG00000009888	ddb1	99	90.419	ENSHGLG00100014475	DDB1	94	90.419	Heterocephalus_glaber_male
ENSSPAG00000009888	ddb1	99	98.696	ENSHCOG00000018670	ddb1	98	98.696	Hippocampus_comes
ENSSPAG00000009888	ddb1	99	96.276	ENSIPUG00000005612	DDB1	98	96.276	Ictalurus_punctatus
ENSSPAG00000009888	ddb1	99	91.535	ENSSTOG00000007552	DDB1	94	91.535	Ictidomys_tridecemlineatus
ENSSPAG00000009888	ddb1	99	91.535	ENSJJAG00000017769	Ddb1	94	91.535	Jaculus_jaculus
ENSSPAG00000009888	ddb1	99	98.603	ENSKMAG00000002315	ddb1	99	98.603	Kryptolebias_marmoratus
ENSSPAG00000009888	ddb1	98	96.158	ENSLBEG00000017065	ddb1	99	99.376	Labrus_bergylta
ENSSPAG00000009888	ddb1	99	91.146	ENSLACG00000017611	DDB1	97	90.987	Latimeria_chalumnae
ENSSPAG00000009888	ddb1	91	88.084	ENSLOCG00000000012	ddb1	93	88.084	Lepisosteus_oculatus
ENSSPAG00000009888	ddb1	99	91.442	ENSLAFG00000011513	DDB1	94	91.442	Loxodonta_africana
ENSSPAG00000009888	ddb1	99	91.535	ENSMFAG00000042035	DDB1	94	91.535	Macaca_fascicularis
ENSSPAG00000009888	ddb1	99	91.535	ENSMMUG00000002691	DDB1	100	90.789	Macaca_mulatta
ENSSPAG00000009888	ddb1	99	91.535	ENSMNEG00000031559	DDB1	94	91.535	Macaca_nemestrina
ENSSPAG00000009888	ddb1	99	91.535	ENSMLEG00000044136	DDB1	98	90.248	Mandrillus_leucophaeus
ENSSPAG00000009888	ddb1	99	99.349	ENSMAMG00000014372	ddb1	94	99.349	Mastacembelus_armatus
ENSSPAG00000009888	ddb1	99	98.419	ENSMZEG00005013835	ddb1	94	98.419	Maylandia_zebra
ENSSPAG00000009888	ddb1	93	90.557	ENSMGAG00000004990	DDB1	94	90.557	Meleagris_gallopavo
ENSSPAG00000009888	ddb1	99	91.628	ENSMAUG00000012926	Ddb1	94	91.628	Mesocricetus_auratus
ENSSPAG00000009888	ddb1	99	91.721	ENSMICG00000013703	DDB1	94	91.721	Microcebus_murinus
ENSSPAG00000009888	ddb1	99	91.535	ENSMOCG00000020499	Ddb1	94	91.535	Microtus_ochrogaster
ENSSPAG00000009888	ddb1	100	96.334	ENSMMOG00000001758	ddb1	99	99.490	Mola_mola
ENSSPAG00000009888	ddb1	99	83.565	ENSMODG00000020353	DDB1	93	83.565	Monodelphis_domestica
ENSSPAG00000009888	ddb1	99	99.256	ENSMALG00000014071	ddb1	94	99.256	Monopterus_albus
ENSSPAG00000009888	ddb1	99	91.628	MGP_CAROLIEiJ_G0022695	Ddb1	94	91.628	Mus_caroli
ENSSPAG00000009888	ddb1	99	91.721	ENSMUSG00000024740	Ddb1	94	91.721	Mus_musculus
ENSSPAG00000009888	ddb1	99	91.628	MGP_PahariEiJ_G0014189	Ddb1	94	91.628	Mus_pahari
ENSSPAG00000009888	ddb1	99	91.721	MGP_SPRETEiJ_G0023609	Ddb1	94	91.721	Mus_spretus
ENSSPAG00000009888	ddb1	99	88.465	ENSMPUG00000014200	DDB1	94	88.465	Mustela_putorius_furo
ENSSPAG00000009888	ddb1	99	91.721	ENSMLUG00000013232	DDB1	94	91.721	Myotis_lucifugus
ENSSPAG00000009888	ddb1	99	91.535	ENSNGAG00000009384	Ddb1	94	91.535	Nannospalax_galili
ENSSPAG00000009888	ddb1	99	98.605	ENSNBRG00000019581	ddb1	94	98.605	Neolamprologus_brichardi
ENSSPAG00000009888	ddb1	99	89.177	ENSNLEG00000002022	DDB1	94	89.177	Nomascus_leucogenys
ENSSPAG00000009888	ddb1	88	100.000	ENSMEUG00000001099	DDB1	87	95.890	Notamacropus_eugenii
ENSSPAG00000009888	ddb1	89	84.977	ENSOPRG00000008254	DDB1	85	82.402	Ochotona_princeps
ENSSPAG00000009888	ddb1	99	91.442	ENSODEG00000002419	DDB1	94	91.442	Octodon_degus
ENSSPAG00000009888	ddb1	99	98.605	ENSONIG00000005804	ddb1	94	98.605	Oreochromis_niloticus
ENSSPAG00000009888	ddb1	89	91.003	ENSOANG00000004897	DDB1	94	91.003	Ornithorhynchus_anatinus
ENSSPAG00000009888	ddb1	99	91.628	ENSOCUG00000001667	DDB1	94	91.628	Oryctolagus_cuniculus
ENSSPAG00000009888	ddb1	99	97.953	ENSORLG00000001399	ddb1	98	97.791	Oryzias_latipes
ENSSPAG00000009888	ddb1	99	97.860	ENSORLG00020001277	ddb1	96	97.860	Oryzias_latipes_hni
ENSSPAG00000009888	ddb1	99	97.953	ENSORLG00015002080	ddb1	99	97.953	Oryzias_latipes_hsok
ENSSPAG00000009888	ddb1	99	97.778	ENSOMEG00000006181	ddb1	98	97.778	Oryzias_melastigma
ENSSPAG00000009888	ddb1	99	91.721	ENSOGAG00000016103	DDB1	94	91.721	Otolemur_garnettii
ENSSPAG00000009888	ddb1	99	91.535	ENSOARG00000011716	DDB1	93	91.535	Ovis_aries
ENSSPAG00000009888	ddb1	99	91.535	ENSPPAG00000035343	DDB1	94	91.535	Pan_paniscus
ENSSPAG00000009888	ddb1	99	91.628	ENSPPRG00000013300	DDB1	94	91.628	Panthera_pardus
ENSSPAG00000009888	ddb1	97	91.651	ENSPTIG00000006909	DDB1	92	91.651	Panthera_tigris_altaica
ENSSPAG00000009888	ddb1	99	91.535	ENSPTRG00000003737	DDB1	94	91.535	Pan_troglodytes
ENSSPAG00000009888	ddb1	99	91.535	ENSPANG00000000242	DDB1	94	91.535	Papio_anubis
ENSSPAG00000009888	ddb1	99	96.648	ENSPKIG00000019213	ddb1	94	96.648	Paramormyrops_kingsleyae
ENSSPAG00000009888	ddb1	97	90.463	ENSPSIG00000013275	DDB1	94	90.463	Pelodiscus_sinensis
ENSSPAG00000009888	ddb1	100	96.029	ENSPMGG00000021179	ddb1	99	99.082	Periophthalmus_magnuspinnatus
ENSSPAG00000009888	ddb1	99	91.628	ENSPEMG00000012241	Ddb1	94	91.628	Peromyscus_maniculatus_bairdii
ENSSPAG00000009888	ddb1	98	83.871	ENSPMAG00000008479	ddb1	100	86.739	Petromyzon_marinus
ENSSPAG00000009888	ddb1	99	91.814	ENSPCIG00000002643	DDB1	94	91.814	Phascolarctos_cinereus
ENSSPAG00000009888	ddb1	99	98.693	ENSPFOG00000002768	ddb1	94	98.693	Poecilia_formosa
ENSSPAG00000009888	ddb1	99	98.698	ENSPLAG00000017227	ddb1	98	98.698	Poecilia_latipinna
ENSSPAG00000009888	ddb1	99	98.698	ENSPMEG00000011398	ddb1	98	98.698	Poecilia_mexicana
ENSSPAG00000009888	ddb1	99	98.698	ENSPREG00000004440	ddb1	98	98.698	Poecilia_reticulata
ENSSPAG00000009888	ddb1	99	87.465	ENSPPYG00000003193	DDB1	94	87.465	Pongo_abelii
ENSSPAG00000009888	ddb1	83	89.421	ENSPCAG00000011040	DDB1	79	89.421	Procavia_capensis
ENSSPAG00000009888	ddb1	100	90.524	ENSPCOG00000015176	DDB1	95	90.524	Propithecus_coquereli
ENSSPAG00000009888	ddb1	99	91.442	ENSPVAG00000003847	DDB1	94	91.442	Pteropus_vampyrus
ENSSPAG00000009888	ddb1	99	97.020	ENSPNAG00000006635	ddb1	97	97.020	Pygocentrus_nattereri
ENSSPAG00000009888	ddb1	99	91.721	ENSRNOG00000020715	Ddb1	94	91.721	Rattus_norvegicus
ENSSPAG00000009888	ddb1	99	91.535	ENSRBIG00000033611	DDB1	95	91.535	Rhinopithecus_bieti
ENSSPAG00000009888	ddb1	99	91.535	ENSRROG00000041407	DDB1	94	91.535	Rhinopithecus_roxellana
ENSSPAG00000009888	ddb1	99	91.628	ENSSBOG00000019775	DDB1	94	91.628	Saimiri_boliviensis_boliviensis
ENSSPAG00000009888	ddb1	93	89.154	ENSSHAG00000011600	DDB1	94	89.154	Sarcophilus_harrisii
ENSSPAG00000009888	ddb1	99	96.837	ENSSFOG00015011151	ddb1	97	96.837	Scleropages_formosus
ENSSPAG00000009888	ddb1	99	98.884	ENSSMAG00000009495	ddb1	94	98.884	Scophthalmus_maximus
ENSSPAG00000009888	ddb1	99	99.349	ENSSDUG00000004642	ddb1	94	99.349	Seriola_dumerili
ENSSPAG00000009888	ddb1	99	99.349	ENSSLDG00000015804	ddb1	94	99.349	Seriola_lalandi_dorsalis
ENSSPAG00000009888	ddb1	72	94.340	ENSSARG00000003290	-	72	94.340	Sorex_araneus
ENSSPAG00000009888	ddb1	99	90.977	ENSSPUG00000019338	DDB1	94	90.977	Sphenodon_punctatus
ENSSPAG00000009888	ddb1	99	91.300	ENSSSCG00000013094	DDB1	94	91.300	Sus_scrofa
ENSSPAG00000009888	ddb1	98	91.276	ENSTGUG00000006414	DDB1	94	91.276	Taeniopygia_guttata
ENSSPAG00000009888	ddb1	99	97.952	ENSTRUG00000016682	ddb1	99	97.952	Takifugu_rubripes
ENSSPAG00000009888	ddb1	86	92.102	ENSTNIG00000009565	ddb1	93	92.102	Tetraodon_nigroviridis
ENSSPAG00000009888	ddb1	91	85.735	ENSTTRG00000011055	DDB1	88	85.735	Tursiops_truncatus
ENSSPAG00000009888	ddb1	99	91.907	ENSUAMG00000017793	DDB1	93	91.907	Ursus_americanus
ENSSPAG00000009888	ddb1	99	91.907	ENSUMAG00000011788	DDB1	98	91.907	Ursus_maritimus
ENSSPAG00000009888	ddb1	94	83.983	ENSVPAG00000007963	DDB1	86	86.782	Vicugna_pacos
ENSSPAG00000009888	ddb1	99	91.628	ENSVVUG00000004987	DDB1	94	91.628	Vulpes_vulpes
ENSSPAG00000009888	ddb1	99	88.601	ENSXETG00000008820	ddb1	94	88.601	Xenopus_tropicalis
ENSSPAG00000009888	ddb1	100	95.316	ENSXCOG00000013956	ddb1	99	98.469	Xiphophorus_couchianus
ENSSPAG00000009888	ddb1	99	98.510	ENSXMAG00000000022	ddb1	99	98.510	Xiphophorus_maculatus