EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000010449 (Gene tree)
Gene ID: -
Gene Symbol: prpf38a
Alias: fa04h11|fc83e08|wu:fa04h11|wu:fc83e08|zgc:92059
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 19259 bases
Position: chrKK580166.1:56319-75577
Accession: 103354076
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000013818	PRP38	PF03371.15	2.6e-38	1	2
ENSSPAP00000013818	PRP38	PF03371.15	2.6e-38	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000014048	-	789	XM_008277330	ENSSPAP00000013818	262 (aa)	XP_008275552	-

Gene Model

Click here to download ENSSPAG00000010449's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000010449's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000010449	prpf38a	100	64.103	ENSG00000134748	PRPF38A	71	70.588	Homo_sapiens
ENSSPAG00000010449	prpf38a	100	84.466	ENSAPOG00000011652	prpf38a	100	84.466	Acanthochromis_polyacanthus
ENSSPAG00000010449	prpf38a	100	64.103	ENSAMEG00000009319	PRPF38A	71	70.588	Ailuropoda_melanoleuca
ENSSPAG00000010449	prpf38a	100	83.113	ENSACIG00000012292	prpf38a	100	79.801	Amphilophus_citrinellus
ENSSPAG00000010449	prpf38a	100	84.466	ENSAOCG00000018004	prpf38a	100	84.466	Amphiprion_ocellaris
ENSSPAG00000010449	prpf38a	100	84.466	ENSAPEG00000021414	prpf38a	100	84.466	Amphiprion_percula
ENSSPAG00000010449	prpf38a	68	75.113	ENSATEG00000004608	prpf38a	83	70.703	Anabas_testudineus
ENSSPAG00000010449	prpf38a	100	63.462	ENSACAG00000008249	PRPF38A	71	69.683	Anolis_carolinensis
ENSSPAG00000010449	prpf38a	100	49.839	ENSANAG00000029204	-	70	45.500	Aotus_nancymaae
ENSSPAG00000010449	prpf38a	100	64.103	ENSANAG00000027839	PRPF38A	71	70.588	Aotus_nancymaae
ENSSPAG00000010449	prpf38a	68	77.376	ENSACLG00000021595	prpf38a	82	77.165	Astatotilapia_calliptera
ENSSPAG00000010449	prpf38a	70	76.991	ENSAMXG00000029274	prpf38a	71	76.471	Astyanax_mexicanus
ENSSPAG00000010449	prpf38a	100	64.103	ENSBTAG00000002720	PRPF38A	75	70.588	Bos_taurus
ENSSPAG00000010449	prpf38a	58	50.769	WBGene00008380	prp-38	59	52.128	Caenorhabditis_elegans
ENSSPAG00000010449	prpf38a	100	64.103	ENSCJAG00000021594	PRPF38A	74	70.588	Callithrix_jacchus
ENSSPAG00000010449	prpf38a	100	64.103	ENSCAFG00000003740	PRPF38A	71	70.588	Canis_familiaris
ENSSPAG00000010449	prpf38a	100	64.103	ENSCAFG00020010939	PRPF38A	71	70.588	Canis_lupus_dingo
ENSSPAG00000010449	prpf38a	100	64.103	ENSCHIG00000024730	PRPF38A	71	70.588	Capra_hircus
ENSSPAG00000010449	prpf38a	56	63.830	ENSTSYG00000031994	-	63	63.483	Carlito_syrichta
ENSSPAG00000010449	prpf38a	100	64.103	ENSTSYG00000009868	-	71	70.588	Carlito_syrichta
ENSSPAG00000010449	prpf38a	100	66.774	ENSCPOG00000005079	PRPF38A	71	70.588	Cavia_porcellus
ENSSPAG00000010449	prpf38a	72	70.563	ENSCCAG00000026502	PRPF38A	71	70.588	Cebus_capucinus
ENSSPAG00000010449	prpf38a	100	64.103	ENSCATG00000032296	PRPF38A	71	70.588	Cercocebus_atys
ENSSPAG00000010449	prpf38a	100	46.622	ENSCATG00000044190	-	100	46.284	Cercocebus_atys
ENSSPAG00000010449	prpf38a	100	64.103	ENSCLAG00000005816	PRPF38A	71	70.588	Chinchilla_lanigera
ENSSPAG00000010449	prpf38a	100	64.423	ENSCPBG00000014791	PRPF38A	71	71.041	Chrysemys_picta_bellii
ENSSPAG00000010449	prpf38a	72	57.143	ENSCSAVG00000009580	-	71	58.525	Ciona_savignyi
ENSSPAG00000010449	prpf38a	72	70.563	ENSCANG00000032608	PRPF38A	74	70.588	Colobus_angolensis_palliatus
ENSSPAG00000010449	prpf38a	82	63.821	ENSCGRG00001002557	-	74	65.865	Cricetulus_griseus_chok1gshd
ENSSPAG00000010449	prpf38a	100	64.103	ENSCGRG00001018502	-	71	70.588	Cricetulus_griseus_chok1gshd
ENSSPAG00000010449	prpf38a	100	64.103	ENSCGRG00000014868	Prpf38a	71	70.588	Cricetulus_griseus_crigri
ENSSPAG00000010449	prpf38a	95	82.292	ENSCSEG00000001269	prpf38a	97	81.655	Cynoglossus_semilaevis
ENSSPAG00000010449	prpf38a	69	76.786	ENSCVAG00000012305	prpf38a	83	73.438	Cyprinodon_variegatus
ENSSPAG00000010449	prpf38a	68	74.661	ENSDARG00000039213	prpf38a	72	75.221	Danio_rerio
ENSSPAG00000010449	prpf38a	100	64.103	ENSDNOG00000042326	PRPF38A	72	70.588	Dasypus_novemcinctus
ENSSPAG00000010449	prpf38a	82	60.687	ENSDORG00000023691	-	67	69.149	Dipodomys_ordii
ENSSPAG00000010449	prpf38a	100	71.852	ENSDORG00000023857	-	66	87.151	Dipodomys_ordii
ENSSPAG00000010449	prpf38a	82	60.687	ENSDORG00000025371	-	67	69.149	Dipodomys_ordii
ENSSPAG00000010449	prpf38a	64	55.924	FBgn0050342	Prp38	57	58.511	Drosophila_melanogaster
ENSSPAG00000010449	prpf38a	74	66.946	ENSEBUG00000012588	prpf38a	71	65.471	Eptatretus_burgeri
ENSSPAG00000010449	prpf38a	100	64.103	ENSEASG00005014427	PRPF38A	71	70.588	Equus_asinus_asinus
ENSSPAG00000010449	prpf38a	100	64.103	ENSECAG00000022628	PRPF38A	71	70.588	Equus_caballus
ENSSPAG00000010449	prpf38a	68	75.676	ENSELUG00000021094	prpf38a	75	75.566	Esox_lucius
ENSSPAG00000010449	prpf38a	100	64.103	ENSFCAG00000002518	PRPF38A	71	70.588	Felis_catus
ENSSPAG00000010449	prpf38a	84	59.851	ENSFALG00000005598	-	66	65.730	Ficedula_albicollis
ENSSPAG00000010449	prpf38a	99	64.052	ENSFALG00000003612	-	73	67.431	Ficedula_albicollis
ENSSPAG00000010449	prpf38a	100	66.667	ENSFDAG00000011287	PRPF38A	72	70.588	Fukomys_damarensis
ENSSPAG00000010449	prpf38a	92	66.438	ENSFHEG00000014317	prpf38a	97	66.438	Fundulus_heteroclitus
ENSSPAG00000010449	prpf38a	100	65.064	ENSGALG00000010627	PRPF38A	71	71.946	Gallus_gallus
ENSSPAG00000010449	prpf38a	68	77.376	ENSGAFG00000012422	prpf38a	72	77.376	Gambusia_affinis
ENSSPAG00000010449	prpf38a	68	77.130	ENSGACG00000005423	prpf38a	72	77.130	Gasterosteus_aculeatus
ENSSPAG00000010449	prpf38a	100	64.423	ENSGAGG00000020547	PRPF38A	71	71.041	Gopherus_agassizii
ENSSPAG00000010449	prpf38a	100	64.103	ENSGGOG00000003940	PRPF38A	71	70.588	Gorilla_gorilla
ENSSPAG00000010449	prpf38a	61	76.355	ENSHBUG00000020572	prpf38a	86	76.355	Haplochromis_burtoni
ENSSPAG00000010449	prpf38a	100	64.103	ENSHGLG00000000475	PRPF38A	71	70.588	Heterocephalus_glaber_female
ENSSPAG00000010449	prpf38a	100	65.101	ENSHGLG00000007918	-	71	63.507	Heterocephalus_glaber_female
ENSSPAG00000010449	prpf38a	100	64.103	ENSHGLG00100008935	PRPF38A	71	70.588	Heterocephalus_glaber_male
ENSSPAG00000010449	prpf38a	100	65.101	ENSHGLG00100003928	-	71	63.507	Heterocephalus_glaber_male
ENSSPAG00000010449	prpf38a	53	70.879	ENSHCOG00000020781	prpf38a	59	71.809	Hippocampus_comes
ENSSPAG00000010449	prpf38a	72	73.707	ENSIPUG00000005757	prpf38a	71	72.973	Ictalurus_punctatus
ENSSPAG00000010449	prpf38a	100	64.103	ENSSTOG00000015610	PRPF38A	71	70.588	Ictidomys_tridecemlineatus
ENSSPAG00000010449	prpf38a	72	69.697	ENSJJAG00000015811	Prpf38a	71	69.683	Jaculus_jaculus
ENSSPAG00000010449	prpf38a	68	76.577	ENSKMAG00000006588	prpf38a	83	71.875	Kryptolebias_marmoratus
ENSSPAG00000010449	prpf38a	95	74.150	ENSLBEG00000020585	prpf38a	83	71.875	Labrus_bergylta
ENSSPAG00000010449	prpf38a	70	71.681	ENSLACG00000011495	PRPF38A	71	71.493	Latimeria_chalumnae
ENSSPAG00000010449	prpf38a	100	73.139	ENSLOCG00000006262	prpf38a	72	72.973	Lepisosteus_oculatus
ENSSPAG00000010449	prpf38a	100	64.103	ENSLAFG00000025862	PRPF38A	71	70.588	Loxodonta_africana
ENSSPAG00000010449	prpf38a	100	64.103	ENSMFAG00000039449	PRPF38A	74	70.588	Macaca_fascicularis
ENSSPAG00000010449	prpf38a	56	64.362	ENSMMUG00000014333	PRPF38A	64	64.045	Macaca_mulatta
ENSSPAG00000010449	prpf38a	100	48.311	ENSMNEG00000040242	-	100	46.575	Macaca_nemestrina
ENSSPAG00000010449	prpf38a	100	64.103	ENSMNEG00000031221	PRPF38A	71	70.588	Macaca_nemestrina
ENSSPAG00000010449	prpf38a	100	64.103	ENSMLEG00000041105	PRPF38A	71	70.588	Mandrillus_leucophaeus
ENSSPAG00000010449	prpf38a	100	83.172	ENSMAMG00000015431	prpf38a	100	83.172	Mastacembelus_armatus
ENSSPAG00000010449	prpf38a	68	77.376	ENSMZEG00005017838	prpf38a	83	72.656	Maylandia_zebra
ENSSPAG00000010449	prpf38a	72	71.861	ENSMGAG00000011176	PRPF38A	74	71.946	Meleagris_gallopavo
ENSSPAG00000010449	prpf38a	83	64.015	ENSMAUG00000018029	-	84	67.421	Mesocricetus_auratus
ENSSPAG00000010449	prpf38a	100	64.103	ENSMICG00000014193	PRPF38A	71	70.588	Microcebus_murinus
ENSSPAG00000010449	prpf38a	100	64.103	ENSMOCG00000013080	Prpf38a	71	70.588	Microtus_ochrogaster
ENSSPAG00000010449	prpf38a	100	82.566	ENSMMOG00000016972	prpf38a	100	82.566	Mola_mola
ENSSPAG00000010449	prpf38a	100	61.981	ENSMODG00000000644	PRPF38A	71	67.568	Monodelphis_domestica
ENSSPAG00000010449	prpf38a	68	78.281	ENSMALG00000019363	prpf38a	97	82.524	Monopterus_albus
ENSSPAG00000010449	prpf38a	72	70.130	MGP_CAROLIEiJ_G0026269	Prpf38a	71	70.136	Mus_caroli
ENSSPAG00000010449	prpf38a	72	70.130	ENSMUSG00000063800	Prpf38a	71	70.136	Mus_musculus
ENSSPAG00000010449	prpf38a	72	70.130	MGP_PahariEiJ_G0028602	Prpf38a	71	70.136	Mus_pahari
ENSSPAG00000010449	prpf38a	100	63.462	MGP_SPRETEiJ_G0027238	Prpf38a	100	71.921	Mus_spretus
ENSSPAG00000010449	prpf38a	100	64.103	ENSMPUG00000006896	PRPF38A	71	70.588	Mustela_putorius_furo
ENSSPAG00000010449	prpf38a	100	66.559	ENSNGAG00000011884	Prpf38a	72	70.588	Nannospalax_galili
ENSSPAG00000010449	prpf38a	100	83.775	ENSNBRG00000004013	prpf38a	98	83.775	Neolamprologus_brichardi
ENSSPAG00000010449	prpf38a	96	59.041	ENSNLEG00000012592	-	67	56.316	Nomascus_leucogenys
ENSSPAG00000010449	prpf38a	100	56.522	ENSNLEG00000033398	-	60	53.005	Nomascus_leucogenys
ENSSPAG00000010449	prpf38a	91	61.592	ENSNLEG00000017999	PRPF38A	63	67.677	Nomascus_leucogenys
ENSSPAG00000010449	prpf38a	72	66.667	ENSMEUG00000003860	PRPF38A	71	66.516	Notamacropus_eugenii
ENSSPAG00000010449	prpf38a	71	70.614	ENSOPRG00000008985	PRPF38A	92	70.588	Ochotona_princeps
ENSSPAG00000010449	prpf38a	100	64.103	ENSODEG00000005869	PRPF38A	71	70.588	Octodon_degus
ENSSPAG00000010449	prpf38a	68	76.018	ENSONIG00000007816	prpf38a	83	71.484	Oreochromis_niloticus
ENSSPAG00000010449	prpf38a	72	44.156	ENSOANG00000009541	-	71	43.694	Ornithorhynchus_anatinus
ENSSPAG00000010449	prpf38a	100	64.103	ENSOCUG00000000963	PRPF38A	71	70.588	Oryctolagus_cuniculus
ENSSPAG00000010449	prpf38a	95	74.830	ENSORLG00000013485	prpf38a	86	72.266	Oryzias_latipes
ENSSPAG00000010449	prpf38a	95	74.830	ENSORLG00020002130	prpf38a	86	72.266	Oryzias_latipes_hni
ENSSPAG00000010449	prpf38a	95	74.490	ENSORLG00015021393	prpf38a	87	71.875	Oryzias_latipes_hsok
ENSSPAG00000010449	prpf38a	95	74.150	ENSOMEG00000016333	prpf38a	83	71.484	Oryzias_melastigma
ENSSPAG00000010449	prpf38a	100	64.103	ENSOGAG00000005423	PRPF38A	71	70.588	Otolemur_garnettii
ENSSPAG00000010449	prpf38a	100	64.103	ENSOARG00000005373	PRPF38A	71	70.588	Ovis_aries
ENSSPAG00000010449	prpf38a	100	60.396	ENSPPAG00000033867	-	68	59.615	Pan_paniscus
ENSSPAG00000010449	prpf38a	100	64.103	ENSPPAG00000030905	PRPF38A	71	70.588	Pan_paniscus
ENSSPAG00000010449	prpf38a	100	64.103	ENSPPRG00000013268	PRPF38A	71	70.588	Panthera_pardus
ENSSPAG00000010449	prpf38a	100	64.103	ENSPTIG00000015419	PRPF38A	71	70.588	Panthera_tigris_altaica
ENSSPAG00000010449	prpf38a	100	64.103	ENSPTRG00000000739	PRPF38A	74	70.588	Pan_troglodytes
ENSSPAG00000010449	prpf38a	100	64.103	ENSPANG00000015483	PRPF38A	71	70.588	Papio_anubis
ENSSPAG00000010449	prpf38a	100	73.377	ENSPKIG00000011439	prpf38a	72	74.775	Paramormyrops_kingsleyae
ENSSPAG00000010449	prpf38a	72	70.563	ENSPSIG00000017487	PRPF38A	71	70.588	Pelodiscus_sinensis
ENSSPAG00000010449	prpf38a	66	74.419	ENSPMGG00000021352	prpf38a	78	75.111	Periophthalmus_magnuspinnatus
ENSSPAG00000010449	prpf38a	100	65.359	ENSPEMG00000011212	-	70	67.606	Peromyscus_maniculatus_bairdii
ENSSPAG00000010449	prpf38a	100	64.103	ENSPEMG00000023277	-	71	70.588	Peromyscus_maniculatus_bairdii
ENSSPAG00000010449	prpf38a	72	67.672	ENSPCIG00000022369	-	71	67.568	Phascolarctos_cinereus
ENSSPAG00000010449	prpf38a	68	77.376	ENSPFOG00000004248	prpf38a	72	77.376	Poecilia_formosa
ENSSPAG00000010449	prpf38a	89	69.395	ENSPLAG00000010328	prpf38a	86	69.395	Poecilia_latipinna
ENSSPAG00000010449	prpf38a	89	69.395	ENSPMEG00000011804	prpf38a	86	69.395	Poecilia_mexicana
ENSSPAG00000010449	prpf38a	89	69.474	ENSPREG00000002835	prpf38a	88	69.474	Poecilia_reticulata
ENSSPAG00000010449	prpf38a	72	60.169	ENSPPYG00000001348	PRPF38A	71	59.735	Pongo_abelii
ENSSPAG00000010449	prpf38a	72	70.996	ENSPCAG00000013328	PRPF38A	71	71.041	Procavia_capensis
ENSSPAG00000010449	prpf38a	100	55.195	ENSPCOG00000020709	-	73	55.204	Propithecus_coquereli
ENSSPAG00000010449	prpf38a	100	64.103	ENSPCOG00000016387	-	71	70.588	Propithecus_coquereli
ENSSPAG00000010449	prpf38a	100	64.103	ENSPVAG00000009803	PRPF38A	71	70.588	Pteropus_vampyrus
ENSSPAG00000010449	prpf38a	68	77.376	ENSPNYG00000005571	prpf38a	83	72.656	Pundamilia_nyererei
ENSSPAG00000010449	prpf38a	70	76.549	ENSPNAG00000010399	prpf38a	71	76.018	Pygocentrus_nattereri
ENSSPAG00000010449	prpf38a	100	64.423	ENSRNOG00000009451	Prpf38a	71	71.041	Rattus_norvegicus
ENSSPAG00000010449	prpf38a	100	64.103	ENSRBIG00000036442	PRPF38A	74	70.588	Rhinopithecus_bieti
ENSSPAG00000010449	prpf38a	100	60.741	ENSRBIG00000034053	-	64	60.894	Rhinopithecus_bieti
ENSSPAG00000010449	prpf38a	98	57.756	ENSRROG00000040003	-	72	55.656	Rhinopithecus_roxellana
ENSSPAG00000010449	prpf38a	100	64.103	ENSRROG00000032788	PRPF38A	71	70.588	Rhinopithecus_roxellana
ENSSPAG00000010449	prpf38a	100	61.481	ENSRROG00000034606	-	65	62.570	Rhinopithecus_roxellana
ENSSPAG00000010449	prpf38a	100	64.103	ENSSBOG00000019515	PRPF38A	71	70.588	Saimiri_boliviensis_boliviensis
ENSSPAG00000010449	prpf38a	77	57.724	ENSSHAG00000006029	-	74	60.181	Sarcophilus_harrisii
ENSSPAG00000010449	prpf38a	56	60.847	ENSSHAG00000006906	-	66	60.335	Sarcophilus_harrisii
ENSSPAG00000010449	prpf38a	100	73.139	ENSSFOG00015013572	prpf38a	72	73.423	Scleropages_formosus
ENSSPAG00000010449	prpf38a	68	77.376	ENSSMAG00000015379	prpf38a	72	77.376	Scophthalmus_maximus
ENSSPAG00000010449	prpf38a	68	78.281	ENSSDUG00000001324	prpf38a	100	82.848	Seriola_dumerili
ENSSPAG00000010449	prpf38a	68	78.281	ENSSLDG00000014803	prpf38a	100	82.848	Seriola_lalandi_dorsalis
ENSSPAG00000010449	prpf38a	100	63.782	ENSSPUG00000013259	PRPF38A	71	70.136	Sphenodon_punctatus
ENSSPAG00000010449	prpf38a	100	64.103	ENSSSCG00000028288	PRPF38A	71	70.588	Sus_scrofa
ENSSPAG00000010449	prpf38a	72	67.100	ENSTGUG00000008995	PRPF38A	71	66.968	Taeniopygia_guttata
ENSSPAG00000010449	prpf38a	68	76.923	ENSTRUG00000003374	prpf38a	68	76.923	Takifugu_rubripes
ENSSPAG00000010449	prpf38a	68	74.888	ENSTNIG00000005533	prpf38a	83	70.543	Tetraodon_nigroviridis
ENSSPAG00000010449	prpf38a	72	70.563	ENSTBEG00000000725	PRPF38A	71	70.588	Tupaia_belangeri
ENSSPAG00000010449	prpf38a	100	64.103	ENSTTRG00000016139	PRPF38A	71	70.588	Tursiops_truncatus
ENSSPAG00000010449	prpf38a	100	64.103	ENSUAMG00000000625	PRPF38A	71	70.588	Ursus_americanus
ENSSPAG00000010449	prpf38a	100	64.103	ENSUMAG00000022674	PRPF38A	71	70.588	Ursus_maritimus
ENSSPAG00000010449	prpf38a	72	70.130	ENSVPAG00000000907	PRPF38A	71	70.136	Vicugna_pacos
ENSSPAG00000010449	prpf38a	100	64.103	ENSVVUG00000004475	PRPF38A	71	70.588	Vulpes_vulpes
ENSSPAG00000010449	prpf38a	68	70.136	ENSXETG00000008060	prpf38a	71	70.136	Xenopus_tropicalis
ENSSPAG00000010449	prpf38a	68	77.727	ENSXCOG00000007393	prpf38a	74	77.727	Xiphophorus_couchianus
ENSSPAG00000010449	prpf38a	68	77.376	ENSXMAG00000026143	prpf38a	72	77.376	Xiphophorus_maculatus