EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000010451 (Gene tree)
Gene ID: 103371910
Gene Symbol: sf3b1
Alias: tst|wu:fb99f09
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 16541 bases
Position: chrKK581739.1:109417-125957
Accession: 103371910
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000013871	SF3b1	PF08920.10	2.2e-47	1	1
ENSSPAP00000013902	SF3b1	PF08920.10	3.7e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000014136	-	3819	-	ENSSPAP00000013902	1272 (aa)	-	-
ENSSPAT00000014104	-	4444	XM_008301389	ENSSPAP00000013871	1331 (aa)	XP_008299611	-

Gene Model

Click here to download ENSSPAG00000010451's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000010451's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000010451	sf3b1	99	93.693	ENSG00000115524	SF3B1	100	93.693	Homo_sapiens
ENSSPAG00000010451	sf3b1	99	99.468	ENSAPOG00000011894	sf3b1	100	99.468	Acanthochromis_polyacanthus
ENSSPAG00000010451	sf3b1	98	93.578	ENSAMEG00000013809	SF3B1	99	93.578	Ailuropoda_melanoleuca
ENSSPAG00000010451	sf3b1	99	98.021	ENSACIG00000020910	sf3b1	97	98.021	Amphilophus_citrinellus
ENSSPAG00000010451	sf3b1	99	99.620	ENSAOCG00000004478	sf3b1	100	99.620	Amphiprion_ocellaris
ENSSPAG00000010451	sf3b1	99	99.620	ENSAPEG00000012937	sf3b1	100	99.620	Amphiprion_percula
ENSSPAG00000010451	sf3b1	99	98.935	ENSATEG00000020435	sf3b1	100	98.935	Anabas_testudineus
ENSSPAG00000010451	sf3b1	98	93.870	ENSAPLG00000003993	SF3B1	99	93.870	Anas_platyrhynchos
ENSSPAG00000010451	sf3b1	99	93.688	ENSACAG00000009612	SF3B1	100	93.688	Anolis_carolinensis
ENSSPAG00000010451	sf3b1	99	93.693	ENSANAG00000021577	SF3B1	100	95.034	Aotus_nancymaae
ENSSPAG00000010451	sf3b1	99	98.250	ENSACLG00000023470	sf3b1	100	98.250	Astatotilapia_calliptera
ENSSPAG00000010451	sf3b1	99	96.960	ENSAMXG00000002219	sf3b1	100	96.960	Astyanax_mexicanus
ENSSPAG00000010451	sf3b1	99	93.693	ENSBTAG00000008915	SF3B1	100	93.693	Bos_taurus
ENSSPAG00000010451	sf3b1	97	64.549	WBGene00011605	sftb-1	99	64.697	Caenorhabditis_elegans
ENSSPAG00000010451	sf3b1	99	93.693	ENSCJAG00000003902	SF3B1	100	93.693	Callithrix_jacchus
ENSSPAG00000010451	sf3b1	99	93.693	ENSCAFG00000010826	SF3B1	100	93.693	Canis_familiaris
ENSSPAG00000010451	sf3b1	99	93.693	ENSCAFG00020004750	SF3B1	100	93.693	Canis_lupus_dingo
ENSSPAG00000010451	sf3b1	99	93.693	ENSCHIG00000015226	SF3B1	100	93.693	Capra_hircus
ENSSPAG00000010451	sf3b1	99	93.617	ENSTSYG00000009214	SF3B1	100	93.617	Carlito_syrichta
ENSSPAG00000010451	sf3b1	98	93.521	ENSCAPG00000006547	SF3B1	99	93.521	Cavia_aperea
ENSSPAG00000010451	sf3b1	98	93.645	ENSCPOG00000009353	SF3B1	100	93.645	Cavia_porcellus
ENSSPAG00000010451	sf3b1	99	93.693	ENSCCAG00000020506	SF3B1	100	93.693	Cebus_capucinus
ENSSPAG00000010451	sf3b1	99	93.693	ENSCATG00000035735	SF3B1	100	93.693	Cercocebus_atys
ENSSPAG00000010451	sf3b1	98	93.650	ENSCLAG00000014767	SF3B1	99	93.650	Chinchilla_lanigera
ENSSPAG00000010451	sf3b1	99	93.693	ENSCSAG00000011505	SF3B1	100	93.693	Chlorocebus_sabaeus
ENSSPAG00000010451	sf3b1	75	92.588	ENSCHOG00000009860	SF3B1	76	92.588	Choloepus_hoffmanni
ENSSPAG00000010451	sf3b1	99	93.836	ENSCPBG00000021902	SF3B1	99	94.949	Chrysemys_picta_bellii
ENSSPAG00000010451	sf3b1	68	77.972	ENSCING00000002558	-	99	78.405	Ciona_intestinalis
ENSSPAG00000010451	sf3b1	99	79.985	ENSCSAVG00000002559	-	99	79.985	Ciona_savignyi
ENSSPAG00000010451	sf3b1	99	93.693	ENSCANG00000029415	SF3B1	100	93.693	Colobus_angolensis_palliatus
ENSSPAG00000010451	sf3b1	99	93.693	ENSCGRG00001016990	Sf3b1	100	93.693	Cricetulus_griseus_chok1gshd
ENSSPAG00000010451	sf3b1	99	93.693	ENSCGRG00000005301	Sf3b1	100	93.693	Cricetulus_griseus_crigri
ENSSPAG00000010451	sf3b1	99	94.064	ENSCSEG00000003860	sf3b1	100	94.064	Cynoglossus_semilaevis
ENSSPAG00000010451	sf3b1	95	98.258	ENSCVAG00000003680	sf3b1	99	98.258	Cyprinodon_variegatus
ENSSPAG00000010451	sf3b1	99	95.741	ENSDARG00000056138	sf3b1	100	95.741	Danio_rerio
ENSSPAG00000010451	sf3b1	99	93.622	ENSDNOG00000011754	SF3B1	100	93.622	Dasypus_novemcinctus
ENSSPAG00000010451	sf3b1	98	91.730	ENSDORG00000002399	Sf3b1	100	91.654	Dipodomys_ordii
ENSSPAG00000010451	sf3b1	99	75.733	FBgn0031266	Sf3b1	100	75.806	Drosophila_melanogaster
ENSSPAG00000010451	sf3b1	82	92.385	ENSETEG00000009188	SF3B1	100	92.385	Echinops_telfairi
ENSSPAG00000010451	sf3b1	98	85.976	ENSEBUG00000004325	sf3b1	100	88.898	Eptatretus_burgeri
ENSSPAG00000010451	sf3b1	99	93.213	ENSEASG00005020159	SF3B1	98	93.213	Equus_asinus_asinus
ENSSPAG00000010451	sf3b1	99	93.213	ENSECAG00000021657	SF3B1	98	93.213	Equus_caballus
ENSSPAG00000010451	sf3b1	86	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSSPAG00000010451	sf3b1	99	95.877	ENSELUG00000005977	sf3b1	99	95.877	Esox_lucius
ENSSPAG00000010451	sf3b1	99	93.693	ENSFCAG00000005038	SF3B1	100	93.693	Felis_catus
ENSSPAG00000010451	sf3b1	98	93.946	ENSFALG00000004281	SF3B1	99	93.946	Ficedula_albicollis
ENSSPAG00000010451	sf3b1	99	93.693	ENSFDAG00000017510	SF3B1	100	93.693	Fukomys_damarensis
ENSSPAG00000010451	sf3b1	99	97.719	ENSFHEG00000014333	sf3b1	100	97.719	Fundulus_heteroclitus
ENSSPAG00000010451	sf3b1	99	96.431	ENSGMOG00000006773	sf3b1	100	96.431	Gadus_morhua
ENSSPAG00000010451	sf3b1	99	93.912	ENSGALG00000008038	SF3B1	100	93.912	Gallus_gallus
ENSSPAG00000010451	sf3b1	97	98.301	ENSGAFG00000000704	sf3b1	100	98.301	Gambusia_affinis
ENSSPAG00000010451	sf3b1	99	97.188	ENSGACG00000008839	sf3b1	100	97.188	Gasterosteus_aculeatus
ENSSPAG00000010451	sf3b1	99	93.197	ENSGAGG00000017478	SF3B1	100	93.197	Gopherus_agassizii
ENSSPAG00000010451	sf3b1	98	88.438	ENSGGOG00000009264	SF3B1	99	88.438	Gorilla_gorilla
ENSSPAG00000010451	sf3b1	99	98.323	ENSHBUG00000007705	sf3b1	99	98.323	Haplochromis_burtoni
ENSSPAG00000010451	sf3b1	98	93.650	ENSHGLG00000008285	-	99	93.650	Heterocephalus_glaber_female
ENSSPAG00000010451	sf3b1	98	91.660	ENSHGLG00100005535	-	99	91.660	Heterocephalus_glaber_male
ENSSPAG00000010451	sf3b1	99	97.201	ENSHCOG00000016775	sf3b1	100	97.201	Hippocampus_comes
ENSSPAG00000010451	sf3b1	99	96.730	ENSIPUG00000013171	sf3b1	100	96.730	Ictalurus_punctatus
ENSSPAG00000010451	sf3b1	99	93.693	ENSSTOG00000011034	SF3B1	100	93.693	Ictidomys_tridecemlineatus
ENSSPAG00000010451	sf3b1	98	93.625	ENSJJAG00000010903	Sf3b1	99	93.625	Jaculus_jaculus
ENSSPAG00000010451	sf3b1	99	97.724	ENSKMAG00000004009	sf3b1	100	97.724	Kryptolebias_marmoratus
ENSSPAG00000010451	sf3b1	99	97.336	ENSLBEG00000022208	sf3b1	100	97.336	Labrus_bergylta
ENSSPAG00000010451	sf3b1	98	90.418	ENSLACG00000014832	SF3B1	99	90.418	Latimeria_chalumnae
ENSSPAG00000010451	sf3b1	99	95.534	ENSLOCG00000003899	sf3b1	100	95.534	Lepisosteus_oculatus
ENSSPAG00000010451	sf3b1	99	93.693	ENSLAFG00000001956	SF3B1	100	93.693	Loxodonta_africana
ENSSPAG00000010451	sf3b1	98	93.650	ENSMMUG00000022430	SF3B1	99	93.650	Macaca_mulatta
ENSSPAG00000010451	sf3b1	99	93.693	ENSMNEG00000042333	SF3B1	100	95.034	Macaca_nemestrina
ENSSPAG00000010451	sf3b1	93	88.808	ENSMLEG00000026141	SF3B1	98	88.808	Mandrillus_leucophaeus
ENSSPAG00000010451	sf3b1	99	99.087	ENSMAMG00000010241	sf3b1	100	99.087	Mastacembelus_armatus
ENSSPAG00000010451	sf3b1	99	98.250	ENSMZEG00005021254	sf3b1	100	98.250	Maylandia_zebra
ENSSPAG00000010451	sf3b1	98	93.333	ENSMGAG00000007017	SF3B1	99	93.333	Meleagris_gallopavo
ENSSPAG00000010451	sf3b1	98	89.441	ENSMAUG00000009071	Sf3b1	99	89.441	Mesocricetus_auratus
ENSSPAG00000010451	sf3b1	99	93.693	ENSMICG00000013879	SF3B1	100	93.693	Microcebus_murinus
ENSSPAG00000010451	sf3b1	98	89.373	ENSMOCG00000000455	Sf3b1	99	89.373	Microtus_ochrogaster
ENSSPAG00000010451	sf3b1	83	98.362	ENSMMOG00000000475	sf3b1	100	98.362	Mola_mola
ENSSPAG00000010451	sf3b1	99	93.237	ENSMODG00000012275	SF3B1	100	93.237	Monodelphis_domestica
ENSSPAG00000010451	sf3b1	99	99.163	ENSMALG00000017211	sf3b1	100	99.163	Monopterus_albus
ENSSPAG00000010451	sf3b1	99	93.693	MGP_CAROLIEiJ_G0014141	Sf3b1	100	93.693	Mus_caroli
ENSSPAG00000010451	sf3b1	99	93.693	ENSMUSG00000025982	Sf3b1	100	93.693	Mus_musculus
ENSSPAG00000010451	sf3b1	99	93.693	MGP_SPRETEiJ_G0014947	Sf3b1	100	93.693	Mus_spretus
ENSSPAG00000010451	sf3b1	99	93.693	ENSMPUG00000007799	SF3B1	100	93.693	Mustela_putorius_furo
ENSSPAG00000010451	sf3b1	99	92.553	ENSMLUG00000000840	SF3B1	100	92.553	Myotis_lucifugus
ENSSPAG00000010451	sf3b1	98	93.369	ENSNGAG00000021884	-	100	93.369	Nannospalax_galili
ENSSPAG00000010451	sf3b1	99	93.090	ENSNBRG00000015816	sf3b1	100	93.156	Neolamprologus_brichardi
ENSSPAG00000010451	sf3b1	99	93.693	ENSNLEG00000006861	SF3B1	100	93.693	Nomascus_leucogenys
ENSSPAG00000010451	sf3b1	68	99.717	ENSMEUG00000015848	-	66	99.717	Notamacropus_eugenii
ENSSPAG00000010451	sf3b1	99	81.115	ENSOPRG00000008596	SF3B1	100	81.264	Ochotona_princeps
ENSSPAG00000010451	sf3b1	99	93.693	ENSODEG00000011153	-	100	93.693	Octodon_degus
ENSSPAG00000010451	sf3b1	99	98.250	ENSONIG00000013758	sf3b1	100	98.250	Oreochromis_niloticus
ENSSPAG00000010451	sf3b1	81	96.218	ENSOCUG00000012722	-	96	96.218	Oryctolagus_cuniculus
ENSSPAG00000010451	sf3b1	99	98.021	ENSORLG00000020219	sf3b1	100	98.021	Oryzias_latipes
ENSSPAG00000010451	sf3b1	99	98.021	ENSORLG00020001746	sf3b1	100	98.021	Oryzias_latipes_hni
ENSSPAG00000010451	sf3b1	63	96.679	ENSORLG00015001759	sf3b1	98	96.679	Oryzias_latipes_hsok
ENSSPAG00000010451	sf3b1	99	98.479	ENSOMEG00000019231	sf3b1	100	98.479	Oryzias_melastigma
ENSSPAG00000010451	sf3b1	50	73.520	ENSOGAG00000000267	-	100	73.520	Otolemur_garnettii
ENSSPAG00000010451	sf3b1	99	93.693	ENSOARG00000015374	SF3B1	100	93.693	Ovis_aries
ENSSPAG00000010451	sf3b1	99	93.693	ENSPPAG00000035007	SF3B1	100	93.693	Pan_paniscus
ENSSPAG00000010451	sf3b1	99	93.693	ENSPPRG00000009090	SF3B1	100	93.693	Panthera_pardus
ENSSPAG00000010451	sf3b1	99	93.693	ENSPTIG00000021557	SF3B1	100	93.693	Panthera_tigris_altaica
ENSSPAG00000010451	sf3b1	98	86.260	ENSPTRG00000012771	SF3B1	99	86.260	Pan_troglodytes
ENSSPAG00000010451	sf3b1	99	93.693	ENSPANG00000013417	SF3B1	100	93.693	Papio_anubis
ENSSPAG00000010451	sf3b1	99	96.279	ENSPKIG00000000784	sf3b1	100	96.279	Paramormyrops_kingsleyae
ENSSPAG00000010451	sf3b1	98	92.638	ENSPSIG00000017222	SF3B1	98	92.638	Pelodiscus_sinensis
ENSSPAG00000010451	sf3b1	89	97.313	ENSPMGG00000004330	sf3b1	99	97.313	Periophthalmus_magnuspinnatus
ENSSPAG00000010451	sf3b1	98	93.650	ENSPEMG00000010699	Sf3b1	100	93.650	Peromyscus_maniculatus_bairdii
ENSSPAG00000010451	sf3b1	99	88.662	ENSPMAG00000001311	sf3b1	100	88.964	Petromyzon_marinus
ENSSPAG00000010451	sf3b1	99	93.313	ENSPCIG00000010642	SF3B1	100	93.313	Phascolarctos_cinereus
ENSSPAG00000010451	sf3b1	99	98.404	ENSPFOG00000000073	sf3b1	100	98.404	Poecilia_formosa
ENSSPAG00000010451	sf3b1	99	98.403	ENSPLAG00000002293	sf3b1	100	98.403	Poecilia_latipinna
ENSSPAG00000010451	sf3b1	99	98.116	ENSPMEG00000000446	sf3b1	99	98.116	Poecilia_mexicana
ENSSPAG00000010451	sf3b1	99	98.555	ENSPREG00000019652	sf3b1	100	98.555	Poecilia_reticulata
ENSSPAG00000010451	sf3b1	82	96.606	ENSPPYG00000013044	SF3B1	95	96.606	Pongo_abelii
ENSSPAG00000010451	sf3b1	99	93.541	ENSPCAG00000009292	SF3B1	100	93.541	Procavia_capensis
ENSSPAG00000010451	sf3b1	99	93.693	ENSPCOG00000024074	SF3B1	100	93.693	Propithecus_coquereli
ENSSPAG00000010451	sf3b1	99	93.693	ENSPVAG00000008302	SF3B1	100	93.693	Pteropus_vampyrus
ENSSPAG00000010451	sf3b1	99	98.174	ENSPNYG00000014939	sf3b1	100	98.174	Pundamilia_nyererei
ENSSPAG00000010451	sf3b1	99	96.809	ENSPNAG00000008288	sf3b1	100	96.809	Pygocentrus_nattereri
ENSSPAG00000010451	sf3b1	99	93.693	ENSRNOG00000013516	Sf3b1	100	93.693	Rattus_norvegicus
ENSSPAG00000010451	sf3b1	99	89.954	ENSRBIG00000026096	SF3B1	100	89.954	Rhinopithecus_bieti
ENSSPAG00000010451	sf3b1	99	93.693	ENSRROG00000031308	SF3B1	100	93.693	Rhinopithecus_roxellana
ENSSPAG00000010451	sf3b1	99	93.693	ENSSBOG00000020080	SF3B1	100	93.693	Saimiri_boliviensis_boliviensis
ENSSPAG00000010451	sf3b1	99	93.237	ENSSHAG00000017564	SF3B1	100	93.237	Sarcophilus_harrisii
ENSSPAG00000010451	sf3b1	99	96.502	ENSSFOG00015021535	sf3b1	100	96.502	Scleropages_formosus
ENSSPAG00000010451	sf3b1	98	97.724	ENSSMAG00000013977	sf3b1	99	97.724	Scophthalmus_maximus
ENSSPAG00000010451	sf3b1	99	99.011	ENSSDUG00000017422	sf3b1	100	99.011	Seriola_dumerili
ENSSPAG00000010451	sf3b1	99	98.935	ENSSLDG00000019495	sf3b1	100	98.935	Seriola_lalandi_dorsalis
ENSSPAG00000010451	sf3b1	77	98.759	ENSSARG00000007016	SF3B1	75	98.944	Sorex_araneus
ENSSPAG00000010451	sf3b1	99	93.607	ENSSPUG00000000410	SF3B1	100	93.607	Sphenodon_punctatus
ENSSPAG00000010451	sf3b1	90	93.172	ENSSSCG00000016075	SF3B1	100	95.034	Sus_scrofa
ENSSPAG00000010451	sf3b1	99	93.912	ENSTGUG00000010553	SF3B1	100	93.912	Taeniopygia_guttata
ENSSPAG00000010451	sf3b1	99	97.793	ENSTRUG00000015534	sf3b1	100	97.793	Takifugu_rubripes
ENSSPAG00000010451	sf3b1	83	97.211	ENSTBEG00000008714	SF3B1	93	97.211	Tupaia_belangeri
ENSSPAG00000010451	sf3b1	91	93.426	ENSTTRG00000003414	SF3B1	92	93.426	Tursiops_truncatus
ENSSPAG00000010451	sf3b1	95	97.976	ENSUAMG00000018506	SF3B1	99	97.976	Ursus_americanus
ENSSPAG00000010451	sf3b1	99	93.693	ENSUMAG00000020945	SF3B1	100	93.693	Ursus_maritimus
ENSSPAG00000010451	sf3b1	94	93.561	ENSVPAG00000005798	SF3B1	96	93.561	Vicugna_pacos
ENSSPAG00000010451	sf3b1	99	93.213	ENSVVUG00000025948	SF3B1	95	93.213	Vulpes_vulpes
ENSSPAG00000010451	sf3b1	99	92.173	ENSXETG00000013339	sf3b1	100	92.173	Xenopus_tropicalis
ENSSPAG00000010451	sf3b1	99	93.916	ENSXCOG00000018086	sf3b1	100	94.221	Xiphophorus_couchianus
ENSSPAG00000010451	sf3b1	99	98.403	ENSXMAG00000007369	sf3b1	100	98.403	Xiphophorus_maculatus