EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000011049 (Gene tree)
Gene ID: 103365099
Gene Symbol: ptcd1
Alias: wu:fi36d06
Full Name: pentatricopeptide repeat-containing protein 1%2C mitochondrial-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 7392 bases
Position: chrKK580882.1:120570-127961
Accession: 103365099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000014621	PPR	PF01535.20	2.4e-16	1	2
ENSSPAP00000014621	PPR	PF01535.20	2.4e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000014863	-	3205	XM_008292440	ENSSPAP00000014621	719 (aa)	XP_008290662	UPI00049566F4

Gene Model

Click here to download ENSSPAG00000011049's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000011049's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000011049	ptcd1	80	49.327	ENSG00000106246	PTCD1	84	49.249	Homo_sapiens
ENSSPAG00000011049	ptcd1	80	49.327	ENSG00000248919	ATP5MF-PTCD1	78	49.249	Homo_sapiens
ENSSPAG00000011049	ptcd1	88	75.355	ENSAPOG00000010679	ptcd1	96	75.197	Acanthochromis_polyacanthus
ENSSPAG00000011049	ptcd1	87	49.387	ENSAMEG00000006224	-	82	50.238	Ailuropoda_melanoleuca
ENSSPAG00000011049	ptcd1	92	74.963	ENSACIG00000017861	ptcd1	97	74.963	Amphilophus_citrinellus
ENSSPAG00000011049	ptcd1	100	75.900	ENSAOCG00000020741	-	100	75.762	Amphiprion_ocellaris
ENSSPAG00000011049	ptcd1	88	77.883	ENSAOCG00000022617	ptcd1	94	77.725	Amphiprion_ocellaris
ENSSPAG00000011049	ptcd1	100	76.039	ENSAPEG00000022632	ptcd1	100	75.900	Amphiprion_percula
ENSSPAG00000011049	ptcd1	100	68.904	ENSATEG00000007016	ptcd1	100	68.904	Anabas_testudineus
ENSSPAG00000011049	ptcd1	80	48.911	ENSAPLG00000006862	-	94	47.512	Anas_platyrhynchos
ENSSPAG00000011049	ptcd1	84	48.558	ENSACAG00000012871	-	80	48.558	Anolis_carolinensis
ENSSPAG00000011049	ptcd1	80	49.664	ENSANAG00000035790	-	86	49.750	Aotus_nancymaae
ENSSPAG00000011049	ptcd1	100	72.376	ENSACLG00000002824	ptcd1	100	72.376	Astatotilapia_calliptera
ENSSPAG00000011049	ptcd1	85	50.617	ENSAMXG00000037292	ptcd1	90	50.772	Astyanax_mexicanus
ENSSPAG00000011049	ptcd1	87	48.545	ENSBTAG00000020440	-	80	48.545	Bos_taurus
ENSSPAG00000011049	ptcd1	80	50.252	ENSCJAG00000015815	-	84	50.333	Callithrix_jacchus
ENSSPAG00000011049	ptcd1	85	49.137	ENSCAFG00000015055	-	83	48.980	Canis_familiaris
ENSSPAG00000011049	ptcd1	85	49.137	ENSCAFG00020014480	-	83	48.980	Canis_lupus_dingo
ENSSPAG00000011049	ptcd1	87	48.607	ENSCHIG00000027000	-	91	48.607	Capra_hircus
ENSSPAG00000011049	ptcd1	83	48.071	ENSTSYG00000029495	-	87	48.071	Carlito_syrichta
ENSSPAG00000011049	ptcd1	84	47.134	ENSCAPG00000014660	-	94	47.134	Cavia_aperea
ENSSPAG00000011049	ptcd1	84	47.930	ENSCPOG00000001780	-	88	47.930	Cavia_porcellus
ENSSPAG00000011049	ptcd1	80	49.749	ENSCCAG00000034025	-	84	49.834	Cebus_capucinus
ENSSPAG00000011049	ptcd1	80	48.904	ENSCATG00000040859	-	84	48.829	Cercocebus_atys
ENSSPAG00000011049	ptcd1	84	48.649	ENSCLAG00000006354	-	88	48.649	Chinchilla_lanigera
ENSSPAG00000011049	ptcd1	76	48.673	ENSCSAG00000017794	-	83	48.246	Chlorocebus_sabaeus
ENSSPAG00000011049	ptcd1	82	47.368	ENSCPBG00000020866	-	84	46.741	Chrysemys_picta_bellii
ENSSPAG00000011049	ptcd1	75	30.108	ENSCING00000007717	-	92	30.147	Ciona_intestinalis
ENSSPAG00000011049	ptcd1	84	47.847	ENSCANG00000023441	-	88	47.235	Colobus_angolensis_palliatus
ENSSPAG00000011049	ptcd1	89	46.606	ENSCGRG00001023686	Ptcd1	93	46.818	Cricetulus_griseus_chok1gshd
ENSSPAG00000011049	ptcd1	88	46.718	ENSCGRG00000015031	Ptcd1	91	46.933	Cricetulus_griseus_crigri
ENSSPAG00000011049	ptcd1	99	59.557	ENSCSEG00000002378	ptcd1	100	59.557	Cynoglossus_semilaevis
ENSSPAG00000011049	ptcd1	91	69.878	ENSCVAG00000003621	ptcd1	97	69.419	Cyprinodon_variegatus
ENSSPAG00000011049	ptcd1	97	68.990	ENSCVAG00000015826	ptcd1	98	68.563	Cyprinodon_variegatus
ENSSPAG00000011049	ptcd1	82	53.400	ENSDARG00000076176	ptcd1	86	53.234	Danio_rerio
ENSSPAG00000011049	ptcd1	81	49.251	ENSDNOG00000009957	-	84	49.094	Dasypus_novemcinctus
ENSSPAG00000011049	ptcd1	83	48.019	ENSDORG00000000740	Ptcd1	89	47.327	Dipodomys_ordii
ENSSPAG00000011049	ptcd1	84	37.744	ENSEBUG00000014515	ptcd1	93	37.950	Eptatretus_burgeri
ENSSPAG00000011049	ptcd1	84	48.657	ENSEASG00005002480	-	87	48.657	Equus_asinus_asinus
ENSSPAG00000011049	ptcd1	84	48.499	ENSECAG00000016617	-	87	48.499	Equus_caballus
ENSSPAG00000011049	ptcd1	91	55.021	ENSELUG00000016517	ptcd1	94	54.738	Esox_lucius
ENSSPAG00000011049	ptcd1	84	48.571	ENSFCAG00000015069	-	88	48.889	Felis_catus
ENSSPAG00000011049	ptcd1	82	47.152	ENSFALG00000013803	-	94	45.194	Ficedula_albicollis
ENSSPAG00000011049	ptcd1	84	47.799	ENSFDAG00000006393	-	88	47.881	Fukomys_damarensis
ENSSPAG00000011049	ptcd1	78	71.658	ENSFHEG00000012491	ptcd1	96	71.658	Fundulus_heteroclitus
ENSSPAG00000011049	ptcd1	87	61.137	ENSGMOG00000007639	ptcd1	99	60.664	Gadus_morhua
ENSSPAG00000011049	ptcd1	80	48.515	ENSGALG00000004711	-	83	48.680	Gallus_gallus
ENSSPAG00000011049	ptcd1	88	68.976	ENSGAFG00000013175	ptcd1	90	69.340	Gambusia_affinis
ENSSPAG00000011049	ptcd1	90	70.092	ENSGACG00000016607	ptcd1	99	69.739	Gasterosteus_aculeatus
ENSSPAG00000011049	ptcd1	79	46.578	ENSGAGG00000021832	-	88	45.910	Gopherus_agassizii
ENSSPAG00000011049	ptcd1	84	47.854	ENSGGOG00000015123	-	87	47.792	Gorilla_gorilla
ENSSPAG00000011049	ptcd1	100	72.514	ENSHBUG00000018275	ptcd1	100	72.514	Haplochromis_burtoni
ENSSPAG00000011049	ptcd1	86	47.442	ENSHGLG00000017621	-	90	47.287	Heterocephalus_glaber_female
ENSSPAG00000011049	ptcd1	86	47.442	ENSHGLG00100007218	-	90	47.287	Heterocephalus_glaber_male
ENSSPAG00000011049	ptcd1	99	56.606	ENSHCOG00000010784	ptcd1	99	57.302	Hippocampus_comes
ENSSPAG00000011049	ptcd1	86	47.368	ENSSTOG00000001682	-	90	47.368	Ictidomys_tridecemlineatus
ENSSPAG00000011049	ptcd1	84	48.576	ENSJJAG00000000319	Ptcd1	89	48.423	Jaculus_jaculus
ENSSPAG00000011049	ptcd1	99	67.172	ENSKMAG00000008708	ptcd1	99	67.172	Kryptolebias_marmoratus
ENSSPAG00000011049	ptcd1	99	66.035	ENSLBEG00000008061	ptcd1	99	65.900	Labrus_bergylta
ENSSPAG00000011049	ptcd1	80	50.927	ENSLACG00000011172	ptcd1	82	50.253	Latimeria_chalumnae
ENSSPAG00000011049	ptcd1	81	53.674	ENSLOCG00000004833	ptcd1	94	52.066	Lepisosteus_oculatus
ENSSPAG00000011049	ptcd1	88	44.853	ENSLAFG00000002588	-	95	45.441	Loxodonta_africana
ENSSPAG00000011049	ptcd1	80	49.073	ENSMFAG00000041324	-	84	48.997	Macaca_fascicularis
ENSSPAG00000011049	ptcd1	80	49.073	ENSMMUG00000030408	-	84	48.997	Macaca_mulatta
ENSSPAG00000011049	ptcd1	80	49.073	ENSMNEG00000043786	-	84	48.997	Macaca_nemestrina
ENSSPAG00000011049	ptcd1	80	37.113	ENSMLEG00000031179	-	81	38.501	Mandrillus_leucophaeus
ENSSPAG00000011049	ptcd1	99	67.078	ENSMAMG00000007623	ptcd1	99	66.941	Mastacembelus_armatus
ENSSPAG00000011049	ptcd1	100	71.961	ENSMZEG00005012722	ptcd1	100	71.961	Maylandia_zebra
ENSSPAG00000011049	ptcd1	83	46.994	ENSMGAG00000004211	-	81	46.614	Meleagris_gallopavo
ENSSPAG00000011049	ptcd1	87	45.242	ENSMICG00000017428	-	90	45.242	Microcebus_murinus
ENSSPAG00000011049	ptcd1	99	69.304	ENSMMOG00000020243	ptcd1	99	69.304	Mola_mola
ENSSPAG00000011049	ptcd1	85	45.426	ENSMODG00000001350	-	86	45.412	Monodelphis_domestica
ENSSPAG00000011049	ptcd1	100	70.315	ENSMALG00000018442	ptcd1	99	70.492	Monopterus_albus
ENSSPAG00000011049	ptcd1	87	46.401	MGP_CAROLIEiJ_G0028011	Ptcd1	91	46.248	Mus_caroli
ENSSPAG00000011049	ptcd1	87	45.929	ENSMUSG00000029624	Ptcd1	91	46.177	Mus_musculus
ENSSPAG00000011049	ptcd1	80	49.497	MGP_PahariEiJ_G0024580	Ptcd1	84	48.993	Mus_pahari
ENSSPAG00000011049	ptcd1	87	45.776	MGP_SPRETEiJ_G0029012	Ptcd1	91	46.330	Mus_spretus
ENSSPAG00000011049	ptcd1	87	48.068	ENSMPUG00000016518	-	90	48.457	Mustela_putorius_furo
ENSSPAG00000011049	ptcd1	83	49.188	ENSMLUG00000010994	-	92	45.661	Myotis_lucifugus
ENSSPAG00000011049	ptcd1	97	70.638	ENSNBRG00000010079	ptcd1	96	73.503	Neolamprologus_brichardi
ENSSPAG00000011049	ptcd1	70	49.237	ENSNLEG00000011060	-	87	49.237	Nomascus_leucogenys
ENSSPAG00000011049	ptcd1	80	46.854	ENSMEUG00000006930	-	84	46.844	Notamacropus_eugenii
ENSSPAG00000011049	ptcd1	71	59.690	ENSOPRG00000013647	-	78	55.263	Ochotona_princeps
ENSSPAG00000011049	ptcd1	85	73.290	ENSONIG00000003168	ptcd1	100	73.290	Oreochromis_niloticus
ENSSPAG00000011049	ptcd1	84	45.182	ENSOANG00000007728	-	83	44.838	Ornithorhynchus_anatinus
ENSSPAG00000011049	ptcd1	80	49.747	ENSOCUG00000010584	-	83	49.256	Oryctolagus_cuniculus
ENSSPAG00000011049	ptcd1	95	66.082	ENSORLG00000009275	ptcd1	98	65.789	Oryzias_latipes
ENSSPAG00000011049	ptcd1	95	66.861	ENSORLG00020000988	ptcd1	98	66.569	Oryzias_latipes_hni
ENSSPAG00000011049	ptcd1	95	65.407	ENSORLG00015010557	ptcd1	98	65.116	Oryzias_latipes_hsok
ENSSPAG00000011049	ptcd1	95	66.910	ENSOMEG00000020627	ptcd1	99	66.618	Oryzias_melastigma
ENSSPAG00000011049	ptcd1	82	47.533	ENSOGAG00000010877	-	89	46.919	Otolemur_garnettii
ENSSPAG00000011049	ptcd1	87	44.613	ENSOARG00000018676	-	92	44.613	Ovis_aries
ENSSPAG00000011049	ptcd1	80	49.161	ENSPPAG00000036024	-	84	49.085	Pan_paniscus
ENSSPAG00000011049	ptcd1	84	48.571	ENSPPRG00000003478	-	89	48.571	Panthera_pardus
ENSSPAG00000011049	ptcd1	84	47.771	ENSPTRG00000019452	-	87	47.709	Pan_troglodytes
ENSSPAG00000011049	ptcd1	80	49.410	ENSPANG00000016730	-	84	49.331	Papio_anubis
ENSSPAG00000011049	ptcd1	82	51.823	ENSPKIG00000014215	ptcd1	88	51.555	Paramormyrops_kingsleyae
ENSSPAG00000011049	ptcd1	80	47.306	ENSPSIG00000011184	-	98	46.218	Pelodiscus_sinensis
ENSSPAG00000011049	ptcd1	70	40.909	ENSPMAG00000009667	ptcd1	100	40.417	Petromyzon_marinus
ENSSPAG00000011049	ptcd1	85	45.554	ENSPCIG00000024778	-	85	45.554	Phascolarctos_cinereus
ENSSPAG00000011049	ptcd1	98	64.714	ENSPFOG00000004458	ptcd1	99	64.880	Poecilia_formosa
ENSSPAG00000011049	ptcd1	98	64.706	ENSPLAG00000011051	ptcd1	99	64.706	Poecilia_latipinna
ENSSPAG00000011049	ptcd1	98	64.993	ENSPMEG00000020547	ptcd1	99	65.162	Poecilia_mexicana
ENSSPAG00000011049	ptcd1	98	63.701	ENSPREG00000000059	ptcd1	99	64.225	Poecilia_reticulata
ENSSPAG00000011049	ptcd1	86	47.059	ENSPPYG00000017377	-	95	47.059	Pongo_abelii
ENSSPAG00000011049	ptcd1	71	55.639	ENSPCAG00000001852	-	82	55.639	Procavia_capensis
ENSSPAG00000011049	ptcd1	85	47.059	ENSPCOG00000018596	-	90	47.096	Propithecus_coquereli
ENSSPAG00000011049	ptcd1	61	50.145	ENSPVAG00000007529	-	68	49.855	Pteropus_vampyrus
ENSSPAG00000011049	ptcd1	100	72.514	ENSPNYG00000019993	ptcd1	100	72.514	Pundamilia_nyererei
ENSSPAG00000011049	ptcd1	81	55.000	ENSPNAG00000014931	ptcd1	87	55.000	Pygocentrus_nattereri
ENSSPAG00000011049	ptcd1	82	48.613	ENSRNOG00000000987	Ptcd1	87	48.450	Rattus_norvegicus
ENSSPAG00000011049	ptcd1	82	48.525	ENSRBIG00000043393	-	86	47.890	Rhinopithecus_bieti
ENSSPAG00000011049	ptcd1	82	48.697	ENSRROG00000036420	-	86	48.226	Rhinopithecus_roxellana
ENSSPAG00000011049	ptcd1	80	49.916	ENSSBOG00000024114	-	84	49.172	Saimiri_boliviensis_boliviensis
ENSSPAG00000011049	ptcd1	80	47.973	ENSSHAG00000011376	-	89	48.305	Sarcophilus_harrisii
ENSSPAG00000011049	ptcd1	82	53.659	ENSSFOG00015007909	ptcd1	82	53.821	Scleropages_formosus
ENSSPAG00000011049	ptcd1	88	67.707	ENSSMAG00000000218	ptcd1	99	67.707	Scophthalmus_maximus
ENSSPAG00000011049	ptcd1	96	71.143	ENSSDUG00000015671	ptcd1	100	71.143	Seriola_dumerili
ENSSPAG00000011049	ptcd1	92	72.700	ENSSLDG00000014261	ptcd1	99	70.306	Seriola_lalandi_dorsalis
ENSSPAG00000011049	ptcd1	84	45.853	ENSSPUG00000003540	-	85	46.299	Sphenodon_punctatus
ENSSPAG00000011049	ptcd1	84	48.970	ENSSSCG00000007622	-	93	48.970	Sus_scrofa
ENSSPAG00000011049	ptcd1	79	47.109	ENSTGUG00000007563	-	95	47.218	Taeniopygia_guttata
ENSSPAG00000011049	ptcd1	97	65.581	ENSTRUG00000013471	ptcd1	99	64.286	Takifugu_rubripes
ENSSPAG00000011049	ptcd1	95	64.680	ENSTNIG00000008271	ptcd1	99	64.877	Tetraodon_nigroviridis
ENSSPAG00000011049	ptcd1	89	45.962	ENSTBEG00000011021	-	95	45.494	Tupaia_belangeri
ENSSPAG00000011049	ptcd1	83	49.013	ENSTTRG00000003006	-	86	49.013	Tursiops_truncatus
ENSSPAG00000011049	ptcd1	83	48.622	ENSUAMG00000008049	-	86	48.950	Ursus_americanus
ENSSPAG00000011049	ptcd1	85	49.294	ENSVVUG00000008836	-	89	49.137	Vulpes_vulpes
ENSSPAG00000011049	ptcd1	82	46.962	ENSXETG00000009891	ptcd1	87	46.341	Xenopus_tropicalis
ENSSPAG00000011049	ptcd1	99	64.516	ENSXMAG00000015540	ptcd1	99	64.656	Xiphophorus_maculatus