EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000011113 (Gene tree)
Gene ID: 103373045
Gene Symbol: rbm38
Alias: fi25e12|rnpc1|wu:fi25e12|zgc:92336
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 28894 bases
Position: chrKK581964.1:14810-43703
Accession: 103373045
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000014726	RRM_1	PF00076.22	3.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000014968	-	4274	XM_008302843	ENSSPAP00000014726	250 (aa)	XP_008301065	UPI0004952E25

Gene Model

Click here to download ENSSPAG00000011113's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000011113's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000011113	rbm38	98	65.613	ENSSPAG00000020989	RBM38	100	65.613
ENSSPAG00000011113	rbm38	72	31.034	ENSSPAG00000013098	-	85	31.034
ENSSPAG00000011113	rbm38	62	69.375	ENSSPAG00000007941	rbm24b	100	56.175
ENSSPAG00000011113	rbm38	54	74.815	ENSSPAG00000014990	rbm24a	100	55.777

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000011113	rbm38	91	58.798	ENSG00000132819	RBM38	94	82.051	Homo_sapiens
ENSSPAG00000011113	rbm38	98	65.217	ENSAPOG00000009939	-	100	66.535	Acanthochromis_polyacanthus
ENSSPAG00000011113	rbm38	100	98.800	ENSAPOG00000003301	rbm38	100	98.800	Acanthochromis_polyacanthus
ENSSPAG00000011113	rbm38	98	64.286	ENSACIG00000012502	-	100	84.615	Amphilophus_citrinellus
ENSSPAG00000011113	rbm38	100	94.400	ENSACIG00000000010	rbm38	100	94.400	Amphilophus_citrinellus
ENSSPAG00000011113	rbm38	100	99.200	ENSAOCG00000013497	-	100	99.200	Amphiprion_ocellaris
ENSSPAG00000011113	rbm38	94	64.583	ENSAOCG00000012559	RBM38	98	65.975	Amphiprion_ocellaris
ENSSPAG00000011113	rbm38	100	99.200	ENSAPEG00000013137	rbm38	100	99.200	Amphiprion_percula
ENSSPAG00000011113	rbm38	98	64.683	ENSAPEG00000023581	-	100	65.079	Amphiprion_percula
ENSSPAG00000011113	rbm38	100	92.400	ENSATEG00000016366	rbm38	100	92.400	Anabas_testudineus
ENSSPAG00000011113	rbm38	98	65.476	ENSATEG00000016710	-	100	65.490	Anabas_testudineus
ENSSPAG00000011113	rbm38	93	57.143	ENSACAG00000016238	RBM38	90	57.143	Anolis_carolinensis
ENSSPAG00000011113	rbm38	93	58.824	ENSANAG00000031959	RBM38	81	85.859	Aotus_nancymaae
ENSSPAG00000011113	rbm38	98	63.922	ENSACLG00000019514	-	100	63.922	Astatotilapia_calliptera
ENSSPAG00000011113	rbm38	98	62.800	ENSAMXG00000015601	-	100	62.800	Astyanax_mexicanus
ENSSPAG00000011113	rbm38	95	56.303	ENSAMXG00000038120	rbm38	96	56.303	Astyanax_mexicanus
ENSSPAG00000011113	rbm38	91	59.227	ENSBTAG00000008105	RBM38	89	59.227	Bos_taurus
ENSSPAG00000011113	rbm38	58	59.310	WBGene00006321	sup-12	77	63.780	Caenorhabditis_elegans
ENSSPAG00000011113	rbm38	91	58.369	ENSCJAG00000019139	RBM38	81	85.859	Callithrix_jacchus
ENSSPAG00000011113	rbm38	91	59.227	ENSCAFG00020021943	RBM38	89	59.227	Canis_lupus_dingo
ENSSPAG00000011113	rbm38	91	57.940	ENSCHIG00000002609	RBM38	89	57.940	Capra_hircus
ENSSPAG00000011113	rbm38	91	59.657	ENSCPOG00000012781	RBM38	89	59.657	Cavia_porcellus
ENSSPAG00000011113	rbm38	91	58.369	ENSCCAG00000036872	RBM38	81	85.859	Cebus_capucinus
ENSSPAG00000011113	rbm38	91	59.657	ENSCATG00000032133	RBM38	81	85.859	Cercocebus_atys
ENSSPAG00000011113	rbm38	93	58.824	ENSCLAG00000005906	RBM38	94	58.824	Chinchilla_lanigera
ENSSPAG00000011113	rbm38	91	59.657	ENSCSAG00000015503	RBM38	89	59.657	Chlorocebus_sabaeus
ENSSPAG00000011113	rbm38	93	58.996	ENSCPBG00000024059	RBM38	100	58.996	Chrysemys_picta_bellii
ENSSPAG00000011113	rbm38	60	62.420	ENSCING00000025102	-	66	62.420	Ciona_intestinalis
ENSSPAG00000011113	rbm38	61	60.127	ENSCSAVG00000001132	-	58	60.127	Ciona_savignyi
ENSSPAG00000011113	rbm38	94	46.610	ENSCANG00000030105	-	80	46.610	Colobus_angolensis_palliatus
ENSSPAG00000011113	rbm38	72	65.574	ENSCGRG00001012928	Rbm38	89	58.369	Cricetulus_griseus_chok1gshd
ENSSPAG00000011113	rbm38	84	69.856	ENSCSEG00000020943	rbm38	68	69.856	Cynoglossus_semilaevis
ENSSPAG00000011113	rbm38	98	64.683	ENSCSEG00000004701	-	100	64.706	Cynoglossus_semilaevis
ENSSPAG00000011113	rbm38	100	88.000	ENSCVAG00000015952	rbm38	100	88.000	Cyprinodon_variegatus
ENSSPAG00000011113	rbm38	98	64.286	ENSCVAG00000005472	-	100	65.476	Cyprinodon_variegatus
ENSSPAG00000011113	rbm38	98	64.659	ENSDARG00000058818	rbm38	100	64.659	Danio_rerio
ENSSPAG00000011113	rbm38	93	57.203	ENSDNOG00000032004	RBM38	100	57.203	Dasypus_novemcinctus
ENSSPAG00000011113	rbm38	91	57.511	ENSECAG00000007700	RBM38	89	57.511	Equus_caballus
ENSSPAG00000011113	rbm38	91	56.838	ENSEEUG00000013489	RBM38	89	57.692	Erinaceus_europaeus
ENSSPAG00000011113	rbm38	92	73.478	ENSELUG00000000585	-	100	73.478	Esox_lucius
ENSSPAG00000011113	rbm38	98	64.706	ENSELUG00000005849	-	100	64.706	Esox_lucius
ENSSPAG00000011113	rbm38	74	64.894	ENSFCAG00000042916	RBM38	81	84.848	Felis_catus
ENSSPAG00000011113	rbm38	70	70.225	ENSFALG00000010805	RBM38	90	69.492	Ficedula_albicollis
ENSSPAG00000011113	rbm38	100	88.446	ENSFHEG00000017748	rbm38	100	88.446	Fundulus_heteroclitus
ENSSPAG00000011113	rbm38	98	62.550	ENSFHEG00000006160	-	100	61.719	Fundulus_heteroclitus
ENSSPAG00000011113	rbm38	75	69.634	ENSGMOG00000016655	-	100	72.775	Gadus_morhua
ENSSPAG00000011113	rbm38	93	57.983	ENSGALG00000026081	RBM38	100	57.983	Gallus_gallus
ENSSPAG00000011113	rbm38	93	63.025	ENSGACG00000009873	-	100	63.025	Gasterosteus_aculeatus
ENSSPAG00000011113	rbm38	93	81.974	ENSGACG00000015224	rbm38	100	81.974	Gasterosteus_aculeatus
ENSSPAG00000011113	rbm38	93	58.996	ENSGAGG00000001187	RBM38	100	58.996	Gopherus_agassizii
ENSSPAG00000011113	rbm38	98	63.922	ENSHBUG00000011778	-	100	63.922	Haplochromis_burtoni
ENSSPAG00000011113	rbm38	100	94.800	ENSHBUG00000012058	rbm38	100	94.800	Haplochromis_burtoni
ENSSPAG00000011113	rbm38	93	58.824	ENSHGLG00000015077	RBM38	90	58.824	Heterocephalus_glaber_female
ENSSPAG00000011113	rbm38	100	64.542	ENSHCOG00000019040	rbm38	100	64.542	Hippocampus_comes
ENSSPAG00000011113	rbm38	81	69.118	ENSHCOG00000005622	-	60	67.593	Hippocampus_comes
ENSSPAG00000011113	rbm38	98	60.400	ENSIPUG00000019349	-	100	60.400	Ictalurus_punctatus
ENSSPAG00000011113	rbm38	91	76.596	ENSKMAG00000012402	rbm38	99	76.596	Kryptolebias_marmoratus
ENSSPAG00000011113	rbm38	98	63.745	ENSLBEG00000016163	RBM38	100	64.202	Labrus_bergylta
ENSSPAG00000011113	rbm38	100	92.800	ENSLBEG00000018878	rbm38	100	92.800	Labrus_bergylta
ENSSPAG00000011113	rbm38	98	64.113	ENSLOCG00000003456	rbm38	100	64.113	Lepisosteus_oculatus
ENSSPAG00000011113	rbm38	91	59.657	ENSMFAG00000043808	RBM38	81	85.859	Macaca_fascicularis
ENSSPAG00000011113	rbm38	91	59.657	ENSMMUG00000031391	RBM38	81	85.859	Macaca_mulatta
ENSSPAG00000011113	rbm38	91	59.657	ENSMNEG00000034683	RBM38	81	85.859	Macaca_nemestrina
ENSSPAG00000011113	rbm38	98	66.932	ENSMAMG00000020499	RBM38	100	66.929	Mastacembelus_armatus
ENSSPAG00000011113	rbm38	100	94.400	ENSMAMG00000024135	rbm38	100	94.400	Mastacembelus_armatus
ENSSPAG00000011113	rbm38	98	63.922	ENSMZEG00005000849	-	100	63.922	Maylandia_zebra
ENSSPAG00000011113	rbm38	100	94.800	ENSMZEG00005026036	rbm38	100	94.800	Maylandia_zebra
ENSSPAG00000011113	rbm38	72	66.120	ENSMAUG00000021211	Rbm38	89	59.227	Mesocricetus_auratus
ENSSPAG00000011113	rbm38	93	57.563	ENSMICG00000038011	RBM38	100	57.563	Microcebus_murinus
ENSSPAG00000011113	rbm38	72	66.120	ENSMOCG00000008715	Rbm38	89	59.227	Microtus_ochrogaster
ENSSPAG00000011113	rbm38	98	64.286	ENSMMOG00000020051	-	100	64.706	Mola_mola
ENSSPAG00000011113	rbm38	95	56.198	ENSMODG00000016458	RBM38	94	56.612	Monodelphis_domestica
ENSSPAG00000011113	rbm38	75	74.737	ENSMALG00000004680	RBM38	89	65.272	Monopterus_albus
ENSSPAG00000011113	rbm38	100	76.400	ENSMALG00000022327	rbm38	100	77.200	Monopterus_albus
ENSSPAG00000011113	rbm38	91	58.369	MGP_CAROLIEiJ_G0024745	Rbm38	89	58.369	Mus_caroli
ENSSPAG00000011113	rbm38	91	58.369	ENSMUSG00000027510	Rbm38	89	58.369	Mus_musculus
ENSSPAG00000011113	rbm38	91	58.369	MGP_PahariEiJ_G0026186	Rbm38	89	58.369	Mus_pahari
ENSSPAG00000011113	rbm38	91	58.369	MGP_SPRETEiJ_G0025665	Rbm38	89	58.369	Mus_spretus
ENSSPAG00000011113	rbm38	74	65.426	ENSMPUG00000006518	RBM38	98	63.415	Mustela_putorius_furo
ENSSPAG00000011113	rbm38	91	57.872	ENSMLUG00000011140	RBM38	98	57.872	Myotis_lucifugus
ENSSPAG00000011113	rbm38	100	94.400	ENSNBRG00000022685	rbm38	100	94.400	Neolamprologus_brichardi
ENSSPAG00000011113	rbm38	98	63.922	ENSNBRG00000022545	-	100	63.922	Neolamprologus_brichardi
ENSSPAG00000011113	rbm38	91	60.086	ENSODEG00000007980	RBM38	89	60.086	Octodon_degus
ENSSPAG00000011113	rbm38	98	63.780	ENSONIG00000020324	-	100	63.780	Oreochromis_niloticus
ENSSPAG00000011113	rbm38	98	95.102	ENSONIG00000017073	rbm38	100	95.102	Oreochromis_niloticus
ENSSPAG00000011113	rbm38	78	63.452	ENSOANG00000009259	RBM38	74	63.776	Ornithorhynchus_anatinus
ENSSPAG00000011113	rbm38	100	84.462	ENSORLG00000012154	rbm38	100	84.462	Oryzias_latipes
ENSSPAG00000011113	rbm38	98	62.598	ENSORLG00000027180	-	100	63.529	Oryzias_latipes
ENSSPAG00000011113	rbm38	100	85.259	ENSORLG00020017871	rbm38	100	85.259	Oryzias_latipes_hni
ENSSPAG00000011113	rbm38	100	62.016	ENSORLG00020020751	-	100	63.529	Oryzias_latipes_hni
ENSSPAG00000011113	rbm38	100	85.259	ENSORLG00015012606	rbm38	100	85.259	Oryzias_latipes_hsok
ENSSPAG00000011113	rbm38	98	63.241	ENSORLG00015017040	-	100	63.922	Oryzias_latipes_hsok
ENSSPAG00000011113	rbm38	98	63.492	ENSOMEG00000023912	-	100	63.889	Oryzias_melastigma
ENSSPAG00000011113	rbm38	100	85.259	ENSOMEG00000006805	rbm38	100	85.259	Oryzias_melastigma
ENSSPAG00000011113	rbm38	91	59.227	ENSOGAG00000029136	RBM38	88	59.227	Otolemur_garnettii
ENSSPAG00000011113	rbm38	74	64.894	ENSPPRG00000009507	RBM38	81	84.848	Panthera_pardus
ENSSPAG00000011113	rbm38	50	80.000	ENSPTRG00000045845	-	68	80.000	Pan_troglodytes
ENSSPAG00000011113	rbm38	76	64.583	ENSPTRG00000013661	RBM38	81	85.859	Pan_troglodytes
ENSSPAG00000011113	rbm38	95	47.325	ENSPANG00000033127	-	93	47.325	Papio_anubis
ENSSPAG00000011113	rbm38	91	59.657	ENSPANG00000020919	-	81	85.859	Papio_anubis
ENSSPAG00000011113	rbm38	98	60.714	ENSPKIG00000025417	rbm38	100	62.500	Paramormyrops_kingsleyae
ENSSPAG00000011113	rbm38	98	60.000	ENSPKIG00000018122	-	100	81.197	Paramormyrops_kingsleyae
ENSSPAG00000011113	rbm38	93	57.563	ENSPSIG00000011649	RBM38	92	57.563	Pelodiscus_sinensis
ENSSPAG00000011113	rbm38	100	79.681	ENSPMGG00000011343	rbm38	100	82.470	Periophthalmus_magnuspinnatus
ENSSPAG00000011113	rbm38	98	61.417	ENSPMGG00000017094	-	100	61.417	Periophthalmus_magnuspinnatus
ENSSPAG00000011113	rbm38	95	57.438	ENSPCIG00000013648	RBM38	94	57.438	Phascolarctos_cinereus
ENSSPAG00000011113	rbm38	100	89.764	ENSPFOG00000011658	rbm38	100	89.764	Poecilia_formosa
ENSSPAG00000011113	rbm38	100	89.370	ENSPLAG00000005218	rbm38	100	89.370	Poecilia_latipinna
ENSSPAG00000011113	rbm38	98	63.281	ENSPLAG00000002500	-	100	64.542	Poecilia_latipinna
ENSSPAG00000011113	rbm38	100	89.370	ENSPMEG00000015770	rbm38	100	89.370	Poecilia_mexicana
ENSSPAG00000011113	rbm38	100	89.370	ENSPREG00000007398	rbm38	100	89.370	Poecilia_reticulata
ENSSPAG00000011113	rbm38	91	58.369	ENSPCOG00000026201	RBM38	84	83.495	Propithecus_coquereli
ENSSPAG00000011113	rbm38	75	40.838	ENSPVAG00000006457	RBM38	92	39.004	Pteropus_vampyrus
ENSSPAG00000011113	rbm38	98	63.922	ENSPNYG00000019727	-	100	84.615	Pundamilia_nyererei
ENSSPAG00000011113	rbm38	100	94.400	ENSPNYG00000021373	rbm38	100	94.400	Pundamilia_nyererei
ENSSPAG00000011113	rbm38	81	66.995	ENSPNAG00000010596	rbm38	84	66.995	Pygocentrus_nattereri
ENSSPAG00000011113	rbm38	98	62.800	ENSPNAG00000015123	-	92	81.513	Pygocentrus_nattereri
ENSSPAG00000011113	rbm38	91	59.227	ENSRNOG00000006420	Rbm38	89	59.227	Rattus_norvegicus
ENSSPAG00000011113	rbm38	93	51.915	ENSRROG00000036388	-	89	51.915	Rhinopithecus_roxellana
ENSSPAG00000011113	rbm38	93	57.143	ENSSBOG00000031053	RBM38	92	85.859	Saimiri_boliviensis_boliviensis
ENSSPAG00000011113	rbm38	98	58.000	ENSSFOG00015004453	rbm38	100	62.000	Scleropages_formosus
ENSSPAG00000011113	rbm38	100	96.000	ENSSDUG00000022611	rbm38	100	96.000	Seriola_dumerili
ENSSPAG00000011113	rbm38	98	64.822	ENSSDUG00000021082	RBM38	100	65.234	Seriola_dumerili
ENSSPAG00000011113	rbm38	100	96.000	ENSSLDG00000010845	rbm38	100	96.000	Seriola_lalandi_dorsalis
ENSSPAG00000011113	rbm38	98	64.822	ENSSLDG00000011778	RBM38	100	65.234	Seriola_lalandi_dorsalis
ENSSPAG00000011113	rbm38	91	59.227	ENSSSCG00000007504	RBM38	89	59.227	Sus_scrofa
ENSSPAG00000011113	rbm38	100	84.800	ENSTRUG00000024954	rbm38	100	85.200	Takifugu_rubripes
ENSSPAG00000011113	rbm38	98	62.992	ENSTRUG00000019869	-	100	63.889	Takifugu_rubripes
ENSSPAG00000011113	rbm38	93	66.807	ENSTNIG00000007093	-	100	66.807	Tetraodon_nigroviridis
ENSSPAG00000011113	rbm38	74	64.894	ENSUAMG00000019780	RBM38	90	58.403	Ursus_americanus
ENSSPAG00000011113	rbm38	91	59.227	ENSVVUG00000017246	RBM38	89	59.227	Vulpes_vulpes
ENSSPAG00000011113	rbm38	77	62.564	ENSXETG00000011268	rbm38	99	56.846	Xenopus_tropicalis
ENSSPAG00000011113	rbm38	83	54.709	ENSXCOG00000017324	-	99	54.709	Xiphophorus_couchianus
ENSSPAG00000011113	rbm38	100	91.200	ENSXMAG00000023662	rbm38	100	91.200	Xiphophorus_maculatus