EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSPAG00000011165 (Gene tree)
Gene ID
103354079
Gene Symbol
RPA1 (1 of many)
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A 70 kDa DNA-binding subunit-like
Gene Type
protein_coding
Species
Stegastes_partitus
Status
putative
Strand
Minus strand
Length
46550 bases
Position
chrKK580167.1:123524-170073
Accession
103354079
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSPAP00000014891tRNA_anti-codonPF01336.251.2e-1311
ENSSPAP00000014932tRNA_anti-codonPF01336.251.3e-1311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSPAT00000015175RPA1 (1 of many)-2021794-ENSSPAP00000014932597 (aa)--
ENSSPAT00000015134RPA1 (1 of many)-2011767XM_008277333ENSSPAP00000014891588 (aa)XP_008275555-
Gene Model
Click here to download ENSSPAG00000011165's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000011165's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSPAG00000011165RPA19963.176ENSSPAG00000009903rpa19963.176
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSPAG00000011165RPA19863.283ENSAPOG00000011658rpa19963.894Acanthochromis_polyacanthus
ENSSPAG00000011165RPA19873.167ENSAPOG00000019409RPA19972.727Acanthochromis_polyacanthus
ENSSPAG00000011165RPA19758.376ENSAMEG00000007706RPA19558.545Ailuropoda_melanoleuca
ENSSPAG00000011165RPA19779.762ENSACIG00000012881RPA19980.205Amphilophus_citrinellus
ENSSPAG00000011165RPA19756.326ENSACIG00000007277rpa19956.696Amphilophus_citrinellus
ENSSPAG00000011165RPA19863.328ENSAOCG00000023376rpa19964.171Amphiprion_ocellaris
ENSSPAG00000011165RPA19880.000ENSAOCG00000009003RPA19980.000Amphiprion_ocellaris
ENSSPAG00000011165RPA19863.283ENSAPEG00000008634rpa19964.171Amphiprion_percula
ENSSPAG00000011165RPA110076.355ENSAPEG00000019132RPA19978.015Amphiprion_percula
ENSSPAG00000011165RPA110072.504ENSATEG00000006443RPA19974.455Anabas_testudineus
ENSSPAG00000011165RPA19662.847ENSATEG00000022024rpa19963.066Anabas_testudineus
ENSSPAG00000011165RPA19750.303ENSAPLG00000012442RPA19950.074Anas_platyrhynchos
ENSSPAG00000011165RPA19854.822ENSACAG00000014490RPA19855.236Anolis_carolinensis
ENSSPAG00000011165RPA19759.511ENSANAG00000023456RPA19860.000Aotus_nancymaae
ENSSPAG00000011165RPA19565.536ENSACLG00000006640rpa19965.771Astatotilapia_calliptera
ENSSPAG00000011165RPA19875.676ENSACLG00000005223RPA19875.835Astatotilapia_calliptera
ENSSPAG00000011165RPA19863.682ENSAMXG00000008418rpa19964.448Astyanax_mexicanus
ENSSPAG00000011165RPA19757.647ENSBTAG00000009711RPA19658.179Bos_taurus
ENSSPAG00000011165RPA19956.863ENSCJAG00000001848RPA19956.863Callithrix_jacchus
ENSSPAG00000011165RPA19757.143ENSCAFG00000019249RPA19657.966Canis_familiaris
ENSSPAG00000011165RPA19757.143ENSCAFG00020009847RPA19657.966Canis_lupus_dingo
ENSSPAG00000011165RPA19757.509ENSCHIG00000026308RPA19657.504Capra_hircus
ENSSPAG00000011165RPA19757.530ENSTSYG00000003482-9657.333Carlito_syrichta
ENSSPAG00000011165RPA19757.699ENSCPOG00000000035RPA19657.797Cavia_porcellus
ENSSPAG00000011165RPA19750.340ENSCCAG00000010981RPA19650.924Cebus_capucinus
ENSSPAG00000011165RPA19956.543ENSCLAG00000005185-9956.543Chinchilla_lanigera
ENSSPAG00000011165RPA19952.913ENSCLAG00000015045-9952.913Chinchilla_lanigera
ENSSPAG00000011165RPA19750.000ENSCSAG00000013833RPA19650.169Chlorocebus_sabaeus
ENSSPAG00000011165RPA19756.876ENSCHOG00000013540-9957.095Choloepus_hoffmanni
ENSSPAG00000011165RPA17365.668ENSCHOG00000009454-9965.899Choloepus_hoffmanni
ENSSPAG00000011165RPA19956.956ENSCPBG00000020377RPA19959.011Chrysemys_picta_bellii
ENSSPAG00000011165RPA19844.776ENSCING00000023482-9844.776Ciona_intestinalis
ENSSPAG00000011165RPA19759.201ENSCANG00000030911RPA19859.343Colobus_angolensis_palliatus
ENSSPAG00000011165RPA19757.360ENSCGRG00001008197Rpa19657.647Cricetulus_griseus_chok1gshd
ENSSPAG00000011165RPA17464.450ENSCGRG00000000582Rpa18564.679Cricetulus_griseus_crigri
ENSSPAG00000011165RPA110064.434ENSCSEG00000012726RPA19967.526Cynoglossus_semilaevis
ENSSPAG00000011165RPA19962.457ENSCSEG00000013066rpa19962.457Cynoglossus_semilaevis
ENSSPAG00000011165RPA19667.388ENSCVAG00000013446-9569.074Cyprinodon_variegatus
ENSSPAG00000011165RPA19962.775ENSCVAG00000019431rpa19965.405Cyprinodon_variegatus
ENSSPAG00000011165RPA110062.729ENSDARG00000003938rpa19962.729Danio_rerio
ENSSPAG00000011165RPA19759.215ENSDNOG00000017218RPA19658.361Dasypus_novemcinctus
ENSSPAG00000011165RPA19758.362ENSDORG00000006199Rpa19658.305Dipodomys_ordii
ENSSPAG00000011165RPA19839.832FBgn0010173RpA-709740.336Drosophila_melanogaster
ENSSPAG00000011165RPA17963.830ENSETEG00000017608RPA17863.830Echinops_telfairi
ENSSPAG00000011165RPA19758.988ENSEASG00005009372RPA19959.928Equus_asinus_asinus
ENSSPAG00000011165RPA19758.305ENSECAG00000023886RPA19658.347Equus_caballus
ENSSPAG00000011165RPA17064.904ENSEEUG00000002186-6865.144Erinaceus_europaeus
ENSSPAG00000011165RPA18964.962ENSELUG00000006136RPA19965.019Esox_lucius
ENSSPAG00000011165RPA110061.386ENSELUG00000021071rpa19862.982Esox_lucius
ENSSPAG00000011165RPA19758.503ENSFCAG00000006306RPA19658.586Felis_catus
ENSSPAG00000011165RPA19956.066ENSFALG00000006575RPA19956.066Ficedula_albicollis
ENSSPAG00000011165RPA19757.679ENSFDAG00000007720RPA19657.797Fukomys_damarensis
ENSSPAG00000011165RPA19862.963ENSFHEG00000003580rpa19862.963Fundulus_heteroclitus
ENSSPAG00000011165RPA19861.092ENSGMOG00000010382rpa19861.092Gadus_morhua
ENSSPAG00000011165RPA19956.650ENSGALG00000003072RPA19956.650Gallus_gallus
ENSSPAG00000011165RPA19871.938ENSGAFG00000020953RPA19871.783Gambusia_affinis
ENSSPAG00000011165RPA19862.944ENSGAFG00000012916rpa19862.944Gambusia_affinis
ENSSPAG00000011165RPA19962.098ENSGACG00000010856rpa19961.667Gasterosteus_aculeatus
ENSSPAG00000011165RPA19857.213ENSGAGG00000013611RPA19857.213Gopherus_agassizii
ENSSPAG00000011165RPA19759.337ENSGGOG00000014186RPA19659.478Gorilla_gorilla
ENSSPAG00000011165RPA19964.250ENSHBUG00000017773rpa19964.250Haplochromis_burtoni
ENSSPAG00000011165RPA19769.739ENSHBUG00000009348RPA19870.157Haplochromis_burtoni
ENSSPAG00000011165RPA19757.850ENSHGLG00000008846RPA19657.841Heterocephalus_glaber_female
ENSSPAG00000011165RPA19757.850ENSHGLG00100017755-9657.841Heterocephalus_glaber_male
ENSSPAG00000011165RPA19848.259ENSHGLG00100002005-9848.435Heterocephalus_glaber_male
ENSSPAG00000011165RPA19753.130ENSHGLG00100000799-9653.457Heterocephalus_glaber_male
ENSSPAG00000011165RPA19954.886ENSHCOG00000001401rpa19857.072Hippocampus_comes
ENSSPAG00000011165RPA19952.261ENSHCOG00000000351RPA19852.261Hippocampus_comes
ENSSPAG00000011165RPA19863.697ENSIPUG00000004400rpa19863.697Ictalurus_punctatus
ENSSPAG00000011165RPA19454.054ENSSTOG00000022475RPA19854.329Ictidomys_tridecemlineatus
ENSSPAG00000011165RPA19857.530ENSJJAG00000000876Rpa19957.530Jaculus_jaculus
ENSSPAG00000011165RPA19874.503ENSKMAG00000000234RPA19874.503Kryptolebias_marmoratus
ENSSPAG00000011165RPA19962.171ENSKMAG00000005605rpa19962.336Kryptolebias_marmoratus
ENSSPAG00000011165RPA19861.333ENSLBEG00000021604rpa19961.333Labrus_bergylta
ENSSPAG00000011165RPA19984.532ENSLBEG00000002281RPA19184.532Labrus_bergylta
ENSSPAG00000011165RPA17857.692ENSLACG00000007210RPA19557.692Latimeria_chalumnae
ENSSPAG00000011165RPA110060.396ENSLOCG00000006397rpa19861.564Lepisosteus_oculatus
ENSSPAG00000011165RPA19757.479ENSLAFG00000015354RPA19557.479Loxodonta_africana
ENSSPAG00000011165RPA18156.823ENSMFAG00000036138-9856.970Macaca_fascicularis
ENSSPAG00000011165RPA19753.345ENSMMUG00000002442-9653.912Macaca_mulatta
ENSSPAG00000011165RPA19757.555ENSMMUG00000011604-9857.673Macaca_mulatta
ENSSPAG00000011165RPA19751.646ENSMNEG00000029837-9652.241Macaca_nemestrina
ENSSPAG00000011165RPA110056.457ENSMNEG00000031632-9956.788Macaca_nemestrina
ENSSPAG00000011165RPA19754.054ENSMLEG00000038768-9854.392Mandrillus_leucophaeus
ENSSPAG00000011165RPA19863.113ENSMAMG00000017993rpa19963.815Mastacembelus_armatus
ENSSPAG00000011165RPA19871.861ENSMAMG00000020097RPA19971.045Mastacembelus_armatus
ENSSPAG00000011165RPA19875.676ENSMZEG00005024731RPA19875.835Maylandia_zebra
ENSSPAG00000011165RPA19964.081ENSMZEG00005007551rpa19964.081Maylandia_zebra
ENSSPAG00000011165RPA19857.262ENSMGAG00000005315RPA19757.262Meleagris_gallopavo
ENSSPAG00000011165RPA19758.020ENSMAUG00000010474Rpa19858.376Mesocricetus_auratus
ENSSPAG00000011165RPA19758.545ENSMICG00000012867RPA19658.883Microcebus_murinus
ENSSPAG00000011165RPA19756.610ENSMOCG00000013019Rpa19656.355Microtus_ochrogaster
ENSSPAG00000011165RPA19979.798ENSMMOG00000010868RPA19979.798Mola_mola
ENSSPAG00000011165RPA19962.104ENSMMOG00000014292rpa19963.465Mola_mola
ENSSPAG00000011165RPA19957.468ENSMODG00000010549RPA19957.468Monodelphis_domestica
ENSSPAG00000011165RPA110084.565ENSMALG00000001208RPA19384.783Monopterus_albus
ENSSPAG00000011165RPA19862.086ENSMALG00000011453rpa19862.086Monopterus_albus
ENSSPAG00000011165RPA19757.627MGP_CAROLIEiJ_G0016734Rpa19657.504Mus_caroli
ENSSPAG00000011165RPA19955.556ENSMUSG00000000751Rpa19955.878Mus_musculus
ENSSPAG00000011165RPA19757.939MGP_PahariEiJ_G0017871Rpa19657.525Mus_pahari
ENSSPAG00000011165RPA19956.019MGP_SPRETEiJ_G0017577Rpa19956.019Mus_spretus
ENSSPAG00000011165RPA19757.797ENSMPUG00000013119RPA19658.277Mustela_putorius_furo
ENSSPAG00000011165RPA19758.404ENSMLUG00000006113RPA19558.516Myotis_lucifugus
ENSSPAG00000011165RPA19757.383ENSNGAG00000004522Rpa19357.383Nannospalax_galili
ENSSPAG00000011165RPA19975.000ENSNBRG00000009672RPA19875.000Neolamprologus_brichardi
ENSSPAG00000011165RPA19665.187ENSNBRG00000020595rpa19965.419Neolamprologus_brichardi
ENSSPAG00000011165RPA19758.532ENSNLEG00000017149RPA19658.249Nomascus_leucogenys
ENSSPAG00000011165RPA19750.514ENSMEUG00000006714RPA19750.680Notamacropus_eugenii
ENSSPAG00000011165RPA19756.385ENSODEG00000009038RPA19657.479Octodon_degus
ENSSPAG00000011165RPA19963.201ENSONIG00000013135rpa19863.201Oreochromis_niloticus
ENSSPAG00000011165RPA19757.240ENSOANG00000010880RPA19857.530Ornithorhynchus_anatinus
ENSSPAG00000011165RPA19955.008ENSOCUG00000001504RPA19656.270Oryctolagus_cuniculus
ENSSPAG00000011165RPA19863.452ENSORLG00000004856rpa19963.452Oryzias_latipes
ENSSPAG00000011165RPA19870.479ENSORLG00000003368RPA19870.479Oryzias_latipes
ENSSPAG00000011165RPA19863.959ENSORLG00020008980rpa19963.959Oryzias_latipes_hni
ENSSPAG00000011165RPA19869.512ENSORLG00020015284RPA19868.902Oryzias_latipes_hni
ENSSPAG00000011165RPA19863.959ENSORLG00015013982rpa19963.959Oryzias_latipes_hsok
ENSSPAG00000011165RPA17280.974ENSORLG00015005867-9880.974Oryzias_latipes_hsok
ENSSPAG00000011165RPA19871.339ENSORLG00015020383RPA19870.886Oryzias_latipes_hsok
ENSSPAG00000011165RPA19574.159ENSOMEG00000011040RPA19974.513Oryzias_melastigma
ENSSPAG00000011165RPA19862.437ENSOMEG00000004704rpa19962.437Oryzias_melastigma
ENSSPAG00000011165RPA17665.909ENSOGAG00000029379-9565.909Otolemur_garnettii
ENSSPAG00000011165RPA19757.789ENSOGAG00000005581-9657.525Otolemur_garnettii
ENSSPAG00000011165RPA19757.509ENSOARG00000014479RPA19657.504Ovis_aries
ENSSPAG00000011165RPA19758.532ENSPPAG00000039680RPA19757.190Pan_paniscus
ENSSPAG00000011165RPA19758.277ENSPPRG00000011807RPA19658.754Panthera_pardus
ENSSPAG00000011165RPA19758.277ENSPTIG00000007898RPA19658.754Panthera_tigris_altaica
ENSSPAG00000011165RPA19758.362ENSPTRG00000008539RPA19757.025Pan_troglodytes
ENSSPAG00000011165RPA19757.725ENSPANG00000024592RPA19658.065Papio_anubis
ENSSPAG00000011165RPA19365.079ENSPKIG00000008053rpa19363.731Paramormyrops_kingsleyae
ENSSPAG00000011165RPA19757.679ENSPSIG00000015617RPA19858.065Pelodiscus_sinensis
ENSSPAG00000011165RPA19962.692ENSPMGG00000011589rpa19962.692Periophthalmus_magnuspinnatus
ENSSPAG00000011165RPA110070.083ENSPMGG00000000543RPA19972.987Periophthalmus_magnuspinnatus
ENSSPAG00000011165RPA19955.397ENSPEMG00000021061Rpa19955.397Peromyscus_maniculatus_bairdii
ENSSPAG00000011165RPA19956.863ENSPCIG00000019049RPA19956.607Phascolarctos_cinereus
ENSSPAG00000011165RPA19863.283ENSPFOG00000003987rpa19863.283Poecilia_formosa
ENSSPAG00000011165RPA19371.593ENSPLAG00000008844-9769.741Poecilia_latipinna
ENSSPAG00000011165RPA19863.283ENSPLAG00000004984rpa19863.283Poecilia_latipinna
ENSSPAG00000011165RPA19863.283ENSPMEG00000020602rpa19965.179Poecilia_mexicana
ENSSPAG00000011165RPA19371.429ENSPMEG00000003627-9571.429Poecilia_mexicana
ENSSPAG00000011165RPA19657.143ENSPREG00000010174rpa19957.143Poecilia_reticulata
ENSSPAG00000011165RPA19868.976ENSPREG00000010119RPA19968.139Poecilia_reticulata
ENSSPAG00000011165RPA19758.376ENSPCOG00000001799RPA19658.376Propithecus_coquereli
ENSSPAG00000011165RPA19956.402ENSPVAG00000002149RPA19956.402Pteropus_vampyrus
ENSSPAG00000011165RPA19964.250ENSPNYG00000016316rpa19965.714Pundamilia_nyererei
ENSSPAG00000011165RPA19875.517ENSPNYG00000024165RPA19875.676Pundamilia_nyererei
ENSSPAG00000011165RPA19857.868ENSPNAG00000008599rpa19956.500Pygocentrus_nattereri
ENSSPAG00000011165RPA19761.353ENSRNOG00000003123Rpa19658.545Rattus_norvegicus
ENSSPAG00000011165RPA19757.895ENSRBIG00000036587RPA19657.895Rhinopithecus_bieti
ENSSPAG00000011165RPA19753.990ENSRROG00000043278RPA19653.794Rhinopithecus_roxellana
ENSSPAG00000011165RPA19730.769YAR007CRFA19631.466Saccharomyces_cerevisiae
ENSSPAG00000011165RPA19357.857ENSSBOG00000030233RPA19758.437Saimiri_boliviensis_boliviensis
ENSSPAG00000011165RPA19858.581ENSSHAG00000007969RPA19758.843Sarcophilus_harrisii
ENSSPAG00000011165RPA110065.066ENSSFOG00015005362rpa19166.949Scleropages_formosus
ENSSPAG00000011165RPA110070.651ENSSMAG00000019746RPA19971.933Scophthalmus_maximus
ENSSPAG00000011165RPA19864.583ENSSDUG00000011949rpa19963.621Seriola_dumerili
ENSSPAG00000011165RPA110070.294ENSSDUG00000016358RPA19972.131Seriola_dumerili
ENSSPAG00000011165RPA19864.583ENSSLDG00000011806rpa19963.959Seriola_lalandi_dorsalis
ENSSPAG00000011165RPA110069.343ENSSLDG00000020784RPA19971.154Seriola_lalandi_dorsalis
ENSSPAG00000011165RPA18152.929ENSSARG00000007506RPA18253.333Sorex_araneus
ENSSPAG00000011165RPA19656.923ENSSPUG00000007223RPA19856.923Sphenodon_punctatus
ENSSPAG00000011165RPA19759.511ENSSSCG00000017822RPA19858.347Sus_scrofa
ENSSPAG00000011165RPA19956.250ENSTGUG00000005775RPA19956.250Taeniopygia_guttata
ENSSPAG00000011165RPA19861.969ENSTRUG00000003616rpa19861.969Takifugu_rubripes
ENSSPAG00000011165RPA19980.828ENSTRUG00000000405RPA19980.828Takifugu_rubripes
ENSSPAG00000011165RPA19961.681ENSTNIG00000016199rpa19861.857Tetraodon_nigroviridis
ENSSPAG00000011165RPA17465.596ENSTBEG00000002709RPA17365.826Tupaia_belangeri
ENSSPAG00000011165RPA19956.427ENSTTRG00000001169RPA19757.119Tursiops_truncatus
ENSSPAG00000011165RPA19665.217ENSUAMG00000015676RPA19573.077Ursus_americanus
ENSSPAG00000011165RPA19759.337ENSUMAG00000009328RPA19659.304Ursus_maritimus
ENSSPAG00000011165RPA19756.655ENSVPAG00000009443RPA19656.441Vicugna_pacos
ENSSPAG00000011165RPA19758.191ENSVVUG00000021715RPA19658.305Vulpes_vulpes
ENSSPAG00000011165RPA19958.961ENSXETG00000013538rpa19858.170Xenopus_tropicalis
ENSSPAG00000011165RPA19462.278ENSXCOG00000010068rpa19562.837Xiphophorus_couchianus
ENSSPAG00000011165RPA19775.923ENSXCOG00000009899-9976.720Xiphophorus_couchianus
ENSSPAG00000011165RPA19983.843ENSXMAG00000010333RPA19283.843Xiphophorus_maculatus
ENSSPAG00000011165RPA19862.775ENSXMAG00000004102rpa19963.489Xiphophorus_maculatus

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