EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000011521 (Gene tree)
Gene ID: 103360780
Gene Symbol: -
Alias: HUPF1|KIAA0221|NORF1|RENT1|pNORF1|smg-2
Full Name: UPF1%2C RNA helicase and ATPase
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 12341 bases
Position: chrKK580535.1:111055-123395
Accession: 103360780
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000015326	UPF1_Zn_bind	PF09416.10	9.2e-75	1	1
ENSSPAP00000015326	ResIII	PF04851.15	2.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000015573	-	3623	XM_008286678	ENSSPAP00000015326	1100 (aa)	XP_008284900	UPI0004969A40

Gene Model

Click here to download ENSSPAG00000011521's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000011521's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000011521	-	100	90.909	ENSSPAG00000000003	upf1	100	90.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000011521	-	100	92.679	ENSG00000005007	UPF1	100	92.768	Homo_sapiens
ENSSPAG00000011521	-	100	93.303	ENSAPOG00000023773	upf1	100	93.303	Acanthochromis_polyacanthus
ENSSPAG00000011521	-	100	99.273	ENSAPOG00000010916	-	100	99.273	Acanthochromis_polyacanthus
ENSSPAG00000011521	-	100	92.007	ENSAMEG00000011474	UPF1	100	92.096	Ailuropoda_melanoleuca
ENSSPAG00000011521	-	100	93.455	ENSACIG00000019949	upf1	100	93.455	Amphilophus_citrinellus
ENSSPAG00000011521	-	93	98.538	ENSACIG00000010985	-	100	98.538	Amphilophus_citrinellus
ENSSPAG00000011521	-	100	92.818	ENSAOCG00000018519	upf1	100	93.280	Amphiprion_ocellaris
ENSSPAG00000011521	-	100	99.273	ENSAOCG00000006352	-	100	99.273	Amphiprion_ocellaris
ENSSPAG00000011521	-	100	99.183	ENSAPEG00000006292	-	100	99.183	Amphiprion_percula
ENSSPAG00000011521	-	100	92.818	ENSAPEG00000016344	upf1	100	93.280	Amphiprion_percula
ENSSPAG00000011521	-	100	99.001	ENSATEG00000016606	-	100	99.001	Anabas_testudineus
ENSSPAG00000011521	-	100	91.689	ENSATEG00000017867	upf1	100	92.665	Anabas_testudineus
ENSSPAG00000011521	-	95	93.934	ENSAPLG00000009175	UPF1	100	93.934	Anas_platyrhynchos
ENSSPAG00000011521	-	95	92.681	ENSANAG00000024107	UPF1	95	92.681	Aotus_nancymaae
ENSSPAG00000011521	-	100	98.730	ENSACLG00000022630	-	100	98.730	Astatotilapia_calliptera
ENSSPAG00000011521	-	100	93.364	ENSACLG00000007181	upf1	100	93.364	Astatotilapia_calliptera
ENSSPAG00000011521	-	100	94.379	ENSAMXG00000042187	upf1	100	94.379	Astyanax_mexicanus
ENSSPAG00000011521	-	100	92.021	ENSBTAG00000020922	UPF1	100	92.110	Bos_taurus
ENSSPAG00000011521	-	97	49.726	WBGene00004880	smg-2	99	49.452	Caenorhabditis_elegans
ENSSPAG00000011521	-	100	91.777	ENSCJAG00000019627	UPF1	100	91.866	Callithrix_jacchus
ENSSPAG00000011521	-	100	91.777	ENSCAFG00000014578	UPF1	100	91.866	Canis_familiaris
ENSSPAG00000011521	-	100	92.679	ENSCAFG00020012347	UPF1	100	92.768	Canis_lupus_dingo
ENSSPAG00000011521	-	100	92.927	ENSCHIG00000011018	UPF1	100	93.017	Capra_hircus
ENSSPAG00000011521	-	95	93.631	ENSTSYG00000008877	UPF1	98	93.631	Carlito_syrichta
ENSSPAG00000011521	-	96	93.045	ENSCAPG00000005758	UPF1	95	93.726	Cavia_aperea
ENSSPAG00000011521	-	100	92.806	ENSCPOG00000025463	UPF1	100	92.806	Cavia_porcellus
ENSSPAG00000011521	-	100	92.679	ENSCCAG00000032175	UPF1	100	92.768	Cebus_capucinus
ENSSPAG00000011521	-	94	94.269	ENSCATG00000040306	UPF1	97	94.269	Cercocebus_atys
ENSSPAG00000011521	-	95	93.821	ENSCLAG00000004037	UPF1	99	93.821	Chinchilla_lanigera
ENSSPAG00000011521	-	100	92.679	ENSCSAG00000005276	UPF1	100	92.768	Chlorocebus_sabaeus
ENSSPAG00000011521	-	100	92.639	ENSCPBG00000012513	UPF1	100	92.639	Chrysemys_picta_bellii
ENSSPAG00000011521	-	77	79.742	ENSCING00000021399	-	99	79.625	Ciona_intestinalis
ENSSPAG00000011521	-	99	73.315	ENSCSAVG00000006533	-	99	73.651	Ciona_savignyi
ENSSPAG00000011521	-	95	94.011	ENSCANG00000029819	UPF1	97	94.011	Colobus_angolensis_palliatus
ENSSPAG00000011521	-	100	92.466	ENSCGRG00001021067	Upf1	100	92.556	Cricetulus_griseus_chok1gshd
ENSSPAG00000011521	-	95	93.346	ENSCGRG00000013480	Upf1	98	93.346	Cricetulus_griseus_crigri
ENSSPAG00000011521	-	100	98.273	ENSCSEG00000016159	-	100	98.273	Cynoglossus_semilaevis
ENSSPAG00000011521	-	100	88.203	ENSCSEG00000017239	upf1	100	88.134	Cynoglossus_semilaevis
ENSSPAG00000011521	-	100	98.093	ENSCVAG00000010561	upf1	100	98.093	Cyprinodon_variegatus
ENSSPAG00000011521	-	100	93.563	ENSDARG00000016302	upf1	100	93.835	Danio_rerio
ENSSPAG00000011521	-	95	91.350	ENSDORG00000009984	Upf1	95	91.350	Dipodomys_ordii
ENSSPAG00000011521	-	86	71.534	FBgn0030354	Upf1	81	71.162	Drosophila_melanogaster
ENSSPAG00000011521	-	54	86.777	ENSEBUG00000010069	upf1	96	87.107	Eptatretus_burgeri
ENSSPAG00000011521	-	100	92.838	ENSEASG00005006549	UPF1	100	92.927	Equus_asinus_asinus
ENSSPAG00000011521	-	100	92.838	ENSECAG00000010639	UPF1	100	92.927	Equus_caballus
ENSSPAG00000011521	-	100	94.950	ENSELUG00000012916	-	100	94.950	Esox_lucius
ENSSPAG00000011521	-	100	92.509	ENSELUG00000020917	upf1	100	92.058	Esox_lucius
ENSSPAG00000011521	-	100	91.689	ENSFCAG00000009757	UPF1	100	91.777	Felis_catus
ENSSPAG00000011521	-	95	94.466	ENSFALG00000009312	UPF1	96	94.466	Ficedula_albicollis
ENSSPAG00000011521	-	95	93.726	ENSFDAG00000014816	UPF1	99	93.726	Fukomys_damarensis
ENSSPAG00000011521	-	100	89.526	ENSFHEG00000006428	upf1	100	89.078	Fundulus_heteroclitus
ENSSPAG00000011521	-	86	98.548	ENSFHEG00000016276	-	96	98.548	Fundulus_heteroclitus
ENSSPAG00000011521	-	100	94.424	ENSGMOG00000007541	upf1	100	94.424	Gadus_morhua
ENSSPAG00000011521	-	100	92.576	ENSGALG00000003220	UPF1	100	92.576	Gallus_gallus
ENSSPAG00000011521	-	63	94.524	ENSGAFG00000015443	-	85	94.524	Gambusia_affinis
ENSSPAG00000011521	-	100	98.182	ENSGAFG00000004831	upf1	100	98.182	Gambusia_affinis
ENSSPAG00000011521	-	100	93.147	ENSGAGG00000022217	UPF1	100	93.237	Gopherus_agassizii
ENSSPAG00000011521	-	95	95.005	ENSGGOG00000002608	UPF1	99	95.005	Gorilla_gorilla
ENSSPAG00000011521	-	90	86.207	ENSHBUG00000014694	upf1	100	86.207	Haplochromis_burtoni
ENSSPAG00000011521	-	86	100.000	ENSHBUG00000008939	upf1	95	100.000	Haplochromis_burtoni
ENSSPAG00000011521	-	100	91.335	ENSHGLG00000010900	UPF1	100	91.424	Heterocephalus_glaber_female
ENSSPAG00000011521	-	95	92.015	ENSHGLG00100005904	UPF1	96	92.015	Heterocephalus_glaber_male
ENSSPAG00000011521	-	100	98.183	ENSHCOG00000008918	upf1	100	98.183	Hippocampus_comes
ENSSPAG00000011521	-	100	94.379	ENSIPUG00000005108	UPF1	100	94.288	Ictalurus_punctatus
ENSSPAG00000011521	-	100	92.500	ENSSTOG00000009196	UPF1	100	92.589	Ictidomys_tridecemlineatus
ENSSPAG00000011521	-	100	91.370	ENSJJAG00000023151	Upf1	100	91.459	Jaculus_jaculus
ENSSPAG00000011521	-	100	98.456	ENSKMAG00000004962	upf1	100	98.456	Kryptolebias_marmoratus
ENSSPAG00000011521	-	100	91.577	ENSLBEG00000014862	upf1	100	92.384	Labrus_bergylta
ENSSPAG00000011521	-	100	98.367	ENSLBEG00000027848	-	100	98.367	Labrus_bergylta
ENSSPAG00000011521	-	63	94.413	ENSLACG00000008482	UPF1	100	93.696	Latimeria_chalumnae
ENSSPAG00000011521	-	100	95.731	ENSLOCG00000002072	upf1	100	95.005	Lepisosteus_oculatus
ENSSPAG00000011521	-	100	91.497	ENSLAFG00000014963	UPF1	100	91.585	Loxodonta_africana
ENSSPAG00000011521	-	100	92.431	ENSMFAG00000037748	UPF1	100	92.520	Macaca_fascicularis
ENSSPAG00000011521	-	100	92.185	ENSMMUG00000023286	UPF1	100	92.274	Macaca_mulatta
ENSSPAG00000011521	-	100	92.431	ENSMNEG00000000046	UPF1	100	92.520	Macaca_nemestrina
ENSSPAG00000011521	-	95	94.011	ENSMLEG00000028404	UPF1	99	94.011	Mandrillus_leucophaeus
ENSSPAG00000011521	-	100	98.730	ENSMAMG00000006231	-	100	98.730	Mastacembelus_armatus
ENSSPAG00000011521	-	100	92.129	ENSMAMG00000006229	upf1	100	93.113	Mastacembelus_armatus
ENSSPAG00000011521	-	100	98.730	ENSMZEG00005016386	-	100	98.730	Maylandia_zebra
ENSSPAG00000011521	-	100	92.273	ENSMZEG00005003489	upf1	100	92.902	Maylandia_zebra
ENSSPAG00000011521	-	95	93.447	ENSMGAG00000004745	UPF1	100	93.447	Meleagris_gallopavo
ENSSPAG00000011521	-	96	92.063	ENSMAUG00000011398	Upf1	95	93.346	Mesocricetus_auratus
ENSSPAG00000011521	-	100	92.411	ENSMICG00000001659	UPF1	100	92.500	Microcebus_murinus
ENSSPAG00000011521	-	100	91.563	ENSMOCG00000005699	Upf1	100	91.741	Microtus_ochrogaster
ENSSPAG00000011521	-	100	92.455	ENSMMOG00000007881	upf1	100	92.825	Mola_mola
ENSSPAG00000011521	-	95	96.364	ENSMMOG00000007537	-	99	96.364	Mola_mola
ENSSPAG00000011521	-	100	91.270	ENSMODG00000003689	UPF1	100	91.446	Monodelphis_domestica
ENSSPAG00000011521	-	100	92.545	ENSMALG00000000144	upf1	100	92.727	Monopterus_albus
ENSSPAG00000011521	-	100	97.104	ENSMALG00000018100	-	100	97.104	Monopterus_albus
ENSSPAG00000011521	-	100	92.377	MGP_CAROLIEiJ_G0031142	Upf1	100	92.466	Mus_caroli
ENSSPAG00000011521	-	100	92.377	ENSMUSG00000058301	Upf1	100	92.466	Mus_musculus
ENSSPAG00000011521	-	100	92.377	MGP_PahariEiJ_G0021607	Upf1	100	92.466	Mus_pahari
ENSSPAG00000011521	-	100	92.377	MGP_SPRETEiJ_G0032260	Upf1	100	92.466	Mus_spretus
ENSSPAG00000011521	-	100	92.679	ENSMPUG00000015516	UPF1	100	92.768	Mustela_putorius_furo
ENSSPAG00000011521	-	99	92.473	ENSMLUG00000012122	UPF1	99	92.563	Myotis_lucifugus
ENSSPAG00000011521	-	100	91.054	ENSNGAG00000024107	Upf1	100	91.143	Nannospalax_galili
ENSSPAG00000011521	-	100	95.101	ENSNBRG00000022069	-	100	97.767	Neolamprologus_brichardi
ENSSPAG00000011521	-	100	91.545	ENSNBRG00000000670	upf1	100	91.545	Neolamprologus_brichardi
ENSSPAG00000011521	-	95	88.213	ENSNLEG00000006062	UPF1	99	88.213	Nomascus_leucogenys
ENSSPAG00000011521	-	83	88.258	ENSMEUG00000014146	-	83	88.258	Notamacropus_eugenii
ENSSPAG00000011521	-	95	87.704	ENSOPRG00000014018	UPF1	99	87.704	Ochotona_princeps
ENSSPAG00000011521	-	100	92.709	ENSODEG00000012426	UPF1	100	92.709	Octodon_degus
ENSSPAG00000011521	-	100	98.730	ENSONIG00000012729	-	100	98.730	Oreochromis_niloticus
ENSSPAG00000011521	-	100	92.453	ENSONIG00000010452	upf1	100	93.082	Oreochromis_niloticus
ENSSPAG00000011521	-	100	91.674	ENSOANG00000004568	UPF1	100	91.585	Ornithorhynchus_anatinus
ENSSPAG00000011521	-	100	97.911	ENSORLG00000008453	upf1	100	97.911	Oryzias_latipes
ENSSPAG00000011521	-	100	97.822	ENSORLG00020014758	upf1	100	97.822	Oryzias_latipes_hni
ENSSPAG00000011521	-	100	97.822	ENSORLG00015010165	upf1	100	97.822	Oryzias_latipes_hsok
ENSSPAG00000011521	-	100	98.002	ENSOMEG00000003665	upf1	100	98.002	Oryzias_melastigma
ENSSPAG00000011521	-	100	92.589	ENSOGAG00000012866	UPF1	100	92.679	Otolemur_garnettii
ENSSPAG00000011521	-	96	90.984	ENSOARG00000010739	UPF1	100	90.984	Ovis_aries
ENSSPAG00000011521	-	95	94.011	ENSPPAG00000043884	UPF1	96	94.011	Pan_paniscus
ENSSPAG00000011521	-	100	91.689	ENSPPRG00000023470	UPF1	100	91.777	Panthera_pardus
ENSSPAG00000011521	-	95	92.809	ENSPTIG00000010159	UPF1	99	92.809	Panthera_tigris_altaica
ENSSPAG00000011521	-	100	92.431	ENSPTRG00000010721	UPF1	100	92.520	Pan_troglodytes
ENSSPAG00000011521	-	100	92.431	ENSPANG00000008847	UPF1	100	92.520	Papio_anubis
ENSSPAG00000011521	-	92	95.238	ENSPKIG00000006069	upf1	95	96.173	Paramormyrops_kingsleyae
ENSSPAG00000011521	-	70	93.342	ENSPSIG00000009491	UPF1	100	93.342	Pelodiscus_sinensis
ENSSPAG00000011521	-	100	91.403	ENSPMGG00000017327	upf1	100	91.493	Periophthalmus_magnuspinnatus
ENSSPAG00000011521	-	100	91.563	ENSPEMG00000001085	Upf1	100	91.652	Peromyscus_maniculatus_bairdii
ENSSPAG00000011521	-	100	87.455	ENSPMAG00000001206	upf1	100	87.455	Petromyzon_marinus
ENSSPAG00000011521	-	100	92.672	ENSPCIG00000006156	UPF1	100	92.761	Phascolarctos_cinereus
ENSSPAG00000011521	-	100	91.269	ENSPLAG00000018155	-	100	90.656	Poecilia_latipinna
ENSSPAG00000011521	-	100	98.273	ENSPLAG00000016232	-	100	98.273	Poecilia_latipinna
ENSSPAG00000011521	-	100	98.183	ENSPMEG00000016319	-	100	98.183	Poecilia_mexicana
ENSSPAG00000011521	-	100	91.840	ENSPMEG00000011443	-	100	91.636	Poecilia_mexicana
ENSSPAG00000011521	-	100	98.000	ENSPREG00000011247	-	100	98.000	Poecilia_reticulata
ENSSPAG00000011521	-	100	91.644	ENSPREG00000009940	upf1	100	91.382	Poecilia_reticulata
ENSSPAG00000011521	-	100	86.914	ENSPPYG00000009752	UPF1	100	86.826	Pongo_abelii
ENSSPAG00000011521	-	70	98.653	ENSPCAG00000012962	UPF1	68	98.653	Procavia_capensis
ENSSPAG00000011521	-	100	92.178	ENSPCOG00000023813	UPF1	100	92.267	Propithecus_coquereli
ENSSPAG00000011521	-	68	100.000	ENSPVAG00000003183	UPF1	69	100.000	Pteropus_vampyrus
ENSSPAG00000011521	-	100	98.730	ENSPNYG00000016731	-	100	98.730	Pundamilia_nyererei
ENSSPAG00000011521	-	100	92.273	ENSPNYG00000003694	upf1	100	92.902	Pundamilia_nyererei
ENSSPAG00000011521	-	100	93.926	ENSPNAG00000025614	upf1	100	93.926	Pygocentrus_nattereri
ENSSPAG00000011521	-	100	92.377	ENSRNOG00000020134	Upf1	100	92.466	Rattus_norvegicus
ENSSPAG00000011521	-	95	91.635	ENSRBIG00000013894	UPF1	98	94.858	Rhinopithecus_bieti
ENSSPAG00000011521	-	95	94.011	ENSRROG00000040935	UPF1	98	94.858	Rhinopithecus_roxellana
ENSSPAG00000011521	-	76	55.910	YMR080C	NAM7	87	55.910	Saccharomyces_cerevisiae
ENSSPAG00000011521	-	94	94.269	ENSSBOG00000023632	UPF1	96	94.269	Saimiri_boliviensis_boliviensis
ENSSPAG00000011521	-	95	93.643	ENSSHAG00000010499	UPF1	100	93.643	Sarcophilus_harrisii
ENSSPAG00000011521	-	100	95.554	ENSSFOG00015021095	upf1	100	94.828	Scleropages_formosus
ENSSPAG00000011521	-	100	98.911	ENSSMAG00000021018	-	100	98.911	Scophthalmus_maximus
ENSSPAG00000011521	-	100	90.966	ENSSMAG00000005055	upf1	100	91.756	Scophthalmus_maximus
ENSSPAG00000011521	-	100	91.860	ENSSDUG00000013320	upf1	100	93.023	Seriola_dumerili
ENSSPAG00000011521	-	100	99.183	ENSSDUG00000009629	-	100	99.183	Seriola_dumerili
ENSSPAG00000011521	-	100	99.183	ENSSLDG00000006878	-	100	99.183	Seriola_lalandi_dorsalis
ENSSPAG00000011521	-	100	92.690	ENSSLDG00000020868	upf1	100	93.231	Seriola_lalandi_dorsalis
ENSSPAG00000011521	-	100	92.979	ENSSPUG00000010538	UPF1	100	93.069	Sphenodon_punctatus
ENSSPAG00000011521	-	100	92.838	ENSSSCG00000039301	UPF1	99	94.823	Sus_scrofa
ENSSPAG00000011521	-	82	86.915	ENSTGUG00000001057	UPF1	100	91.272	Taeniopygia_guttata
ENSSPAG00000011521	-	100	97.000	ENSTRUG00000005131	-	100	97.000	Takifugu_rubripes
ENSSPAG00000011521	-	100	92.461	ENSTRUG00000000150	upf1	100	92.461	Takifugu_rubripes
ENSSPAG00000011521	-	100	89.167	ENSTTRG00000011544	UPF1	100	89.167	Tursiops_truncatus
ENSSPAG00000011521	-	100	92.589	ENSUAMG00000007093	UPF1	100	92.679	Ursus_americanus
ENSSPAG00000011521	-	95	94.823	ENSUMAG00000006652	UPF1	99	95.233	Ursus_maritimus
ENSSPAG00000011521	-	100	92.679	ENSVVUG00000007797	UPF1	100	92.768	Vulpes_vulpes
ENSSPAG00000011521	-	100	79.559	ENSXETG00000013602	upf1	100	79.119	Xenopus_tropicalis
ENSSPAG00000011521	-	94	98.351	ENSXCOG00000005764	-	100	98.351	Xiphophorus_couchianus
ENSSPAG00000011521	-	97	91.533	ENSXCOG00000015275	-	96	91.533	Xiphophorus_couchianus
ENSSPAG00000011521	-	100	98.002	ENSXMAG00000002540	-	100	98.002	Xiphophorus_maculatus
ENSSPAG00000011521	-	100	91.727	ENSXMAG00000001703	-	100	91.727	Xiphophorus_maculatus