EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000011642 (Gene tree)
Gene ID: 103371258
Gene Symbol: rabl3
Alias: fb40b02|wu:fb40b02|zgc:100876
Full Name: RAB%2C member of RAS oncogene family like 3
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 3547 bases
Position: chrKK581626.1:105722-109268
Accession: 103371258
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000015431	MMR_HSR1	PF01926.23	1.4e-05	1	1
ENSSPAP00000015471	MMR_HSR1	PF01926.23	1.5e-05	1	1
ENSSPAP00000015442	MMR_HSR1	PF01926.23	1.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000015722	-	681	-	ENSSPAP00000015471	226 (aa)	-	-
ENSSPAT00000015681	-	787	XM_008300514	ENSSPAP00000015431	233 (aa)	XP_008298736	UPI000494FA7B
ENSSPAT00000015689	-	823	-	ENSSPAP00000015442	245 (aa)	-	-

Gene Model

Click here to download ENSSPAG00000011642's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000011642's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000011642	rabl3	54	31.405	ENSSPAG00000010919	-	53	31.405
ENSSPAG00000011642	rabl3	54	31.405	ENSSPAG00000010771	RAB39B	53	31.405

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000011642	rabl3	100	85.593	ENSG00000144840	RABL3	100	92.248	Homo_sapiens
ENSSPAG00000011642	rabl3	100	98.718	ENSAPOG00000024479	rabl3	100	98.718	Acanthochromis_polyacanthus
ENSSPAG00000011642	rabl3	100	86.441	ENSAMEG00000004809	RABL3	100	86.441	Ailuropoda_melanoleuca
ENSSPAG00000011642	rabl3	100	95.175	ENSACIG00000014343	rabl3	100	95.175	Amphilophus_citrinellus
ENSSPAG00000011642	rabl3	100	98.718	ENSAOCG00000011851	rabl3	100	98.718	Amphiprion_ocellaris
ENSSPAG00000011642	rabl3	100	98.718	ENSAPEG00000011214	rabl3	100	98.718	Amphiprion_percula
ENSSPAG00000011642	rabl3	100	98.283	ENSATEG00000003503	rabl3	100	98.283	Anabas_testudineus
ENSSPAG00000011642	rabl3	100	80.508	ENSACAG00000011313	-	100	80.508	Anolis_carolinensis
ENSSPAG00000011642	rabl3	100	87.712	ENSANAG00000027278	RABL3	100	87.712	Aotus_nancymaae
ENSSPAG00000011642	rabl3	100	98.283	ENSACLG00000009820	rabl3	100	98.283	Astatotilapia_calliptera
ENSSPAG00000011642	rabl3	100	93.991	ENSAMXG00000038716	rabl3	100	93.991	Astyanax_mexicanus
ENSSPAG00000011642	rabl3	100	88.136	ENSBTAG00000015898	RABL3	100	88.136	Bos_taurus
ENSSPAG00000011642	rabl3	100	87.712	ENSCJAG00000008611	RABL3	100	87.712	Callithrix_jacchus
ENSSPAG00000011642	rabl3	100	87.288	ENSCAFG00000011292	RABL3	89	87.288	Canis_familiaris
ENSSPAG00000011642	rabl3	100	87.288	ENSCAFG00020006397	RABL3	100	87.288	Canis_lupus_dingo
ENSSPAG00000011642	rabl3	100	88.136	ENSCHIG00000017365	RABL3	100	88.136	Capra_hircus
ENSSPAG00000011642	rabl3	100	86.017	ENSCPOG00000009645	RABL3	100	86.017	Cavia_porcellus
ENSSPAG00000011642	rabl3	100	86.017	ENSCATG00000032561	RABL3	100	86.017	Cercocebus_atys
ENSSPAG00000011642	rabl3	100	85.593	ENSCLAG00000010855	RABL3	100	85.593	Chinchilla_lanigera
ENSSPAG00000011642	rabl3	99	85.837	ENSCSAG00000007155	RABL3	100	85.837	Chlorocebus_sabaeus
ENSSPAG00000011642	rabl3	100	86.864	ENSCPBG00000001999	RABL3	100	86.864	Chrysemys_picta_bellii
ENSSPAG00000011642	rabl3	100	86.017	ENSCANG00000031684	RABL3	100	86.017	Colobus_angolensis_palliatus
ENSSPAG00000011642	rabl3	100	83.475	ENSCGRG00001021537	Rabl3	100	83.475	Cricetulus_griseus_chok1gshd
ENSSPAG00000011642	rabl3	100	83.475	ENSCGRG00000002114	Rabl3	100	83.475	Cricetulus_griseus_crigri
ENSSPAG00000011642	rabl3	100	84.513	ENSCSEG00000014982	rabl3	100	84.513	Cynoglossus_semilaevis
ENSSPAG00000011642	rabl3	100	82.743	ENSCVAG00000009904	rabl3	91	96.067	Cyprinodon_variegatus
ENSSPAG00000011642	rabl3	100	95.279	ENSDARG00000040959	rabl3	100	95.279	Danio_rerio
ENSSPAG00000011642	rabl3	100	86.017	ENSDNOG00000008174	RABL3	100	86.017	Dasypus_novemcinctus
ENSSPAG00000011642	rabl3	100	85.593	ENSETEG00000010206	RABL3	100	85.593	Echinops_telfairi
ENSSPAG00000011642	rabl3	100	87.712	ENSECAG00000023059	RABL3	100	87.712	Equus_caballus
ENSSPAG00000011642	rabl3	100	81.780	ENSEEUG00000002897	RABL3	100	81.780	Erinaceus_europaeus
ENSSPAG00000011642	rabl3	100	93.991	ENSELUG00000014758	rabl3	100	93.991	Esox_lucius
ENSSPAG00000011642	rabl3	100	87.288	ENSFCAG00000031879	RABL3	100	78.166	Felis_catus
ENSSPAG00000011642	rabl3	100	84.746	ENSFALG00000005296	RABL3	100	84.746	Ficedula_albicollis
ENSSPAG00000011642	rabl3	100	86.383	ENSFDAG00000000307	RABL3	100	86.383	Fukomys_damarensis
ENSSPAG00000011642	rabl3	100	93.991	ENSFHEG00000011273	rabl3	100	93.991	Fundulus_heteroclitus
ENSSPAG00000011642	rabl3	100	93.991	ENSGMOG00000007845	rabl3	100	93.991	Gadus_morhua
ENSSPAG00000011642	rabl3	100	86.017	ENSGALG00000014949	RABL3	100	86.017	Gallus_gallus
ENSSPAG00000011642	rabl3	100	93.562	ENSGAFG00000015953	rabl3	100	93.562	Gambusia_affinis
ENSSPAG00000011642	rabl3	100	93.991	ENSGACG00000007387	rabl3	100	94.574	Gasterosteus_aculeatus
ENSSPAG00000011642	rabl3	100	87.288	ENSGAGG00000003677	RABL3	100	87.288	Gopherus_agassizii
ENSSPAG00000011642	rabl3	100	85.593	ENSGGOG00000006059	RABL3	100	85.593	Gorilla_gorilla
ENSSPAG00000011642	rabl3	100	98.712	ENSHBUG00000019478	rabl3	93	98.712	Haplochromis_burtoni
ENSSPAG00000011642	rabl3	100	86.383	ENSHGLG00000014491	RABL3	100	86.383	Heterocephalus_glaber_female
ENSSPAG00000011642	rabl3	100	86.383	ENSHGLG00100004866	RABL3	100	86.383	Heterocephalus_glaber_male
ENSSPAG00000011642	rabl3	100	84.956	ENSHCOG00000019245	rabl3	91	97.753	Hippocampus_comes
ENSSPAG00000011642	rabl3	100	92.704	ENSIPUG00000012657	rabl3	100	92.704	Ictalurus_punctatus
ENSSPAG00000011642	rabl3	100	85.593	ENSSTOG00000019452	RABL3	100	85.593	Ictidomys_tridecemlineatus
ENSSPAG00000011642	rabl3	100	76.856	ENSJJAG00000023553	Rabl3	100	76.856	Jaculus_jaculus
ENSSPAG00000011642	rabl3	100	91.416	ENSKMAG00000015464	rabl3	100	91.416	Kryptolebias_marmoratus
ENSSPAG00000011642	rabl3	100	97.436	ENSLBEG00000020595	rabl3	100	97.436	Labrus_bergylta
ENSSPAG00000011642	rabl3	100	97.436	ENSLBEG00000010627	-	100	97.436	Labrus_bergylta
ENSSPAG00000011642	rabl3	100	88.983	ENSLOCG00000006265	rabl3	100	88.983	Lepisosteus_oculatus
ENSSPAG00000011642	rabl3	100	86.864	ENSLAFG00000003711	RABL3	100	86.864	Loxodonta_africana
ENSSPAG00000011642	rabl3	100	86.017	ENSMFAG00000031923	RABL3	100	86.017	Macaca_fascicularis
ENSSPAG00000011642	rabl3	100	76.856	ENSMMUG00000001594	RABL3	100	76.856	Macaca_mulatta
ENSSPAG00000011642	rabl3	100	86.017	ENSMNEG00000043980	RABL3	100	86.017	Macaca_nemestrina
ENSSPAG00000011642	rabl3	100	86.017	ENSMLEG00000028177	RABL3	100	86.017	Mandrillus_leucophaeus
ENSSPAG00000011642	rabl3	100	97.425	ENSMAMG00000015155	rabl3	100	97.425	Mastacembelus_armatus
ENSSPAG00000011642	rabl3	100	98.283	ENSMZEG00005002607	rabl3	100	98.283	Maylandia_zebra
ENSSPAG00000011642	rabl3	100	83.475	ENSMAUG00000013022	Rabl3	100	83.475	Mesocricetus_auratus
ENSSPAG00000011642	rabl3	100	86.864	ENSMICG00000049288	RABL3	100	86.864	Microcebus_murinus
ENSSPAG00000011642	rabl3	100	83.051	ENSMOCG00000015237	Rabl3	100	83.051	Microtus_ochrogaster
ENSSPAG00000011642	rabl3	100	95.614	ENSMMOG00000005628	rabl3	100	95.614	Mola_mola
ENSSPAG00000011642	rabl3	100	87.288	ENSMODG00000018232	RABL3	100	87.288	Monodelphis_domestica
ENSSPAG00000011642	rabl3	100	90.254	ENSMALG00000018837	rabl3	100	90.254	Monopterus_albus
ENSSPAG00000011642	rabl3	100	83.475	MGP_CAROLIEiJ_G0020728	Rabl3	100	91.473	Mus_caroli
ENSSPAG00000011642	rabl3	100	83.475	ENSMUSG00000022827	Rabl3	100	91.473	Mus_musculus
ENSSPAG00000011642	rabl3	100	83.051	MGP_PahariEiJ_G0016429	Rabl3	100	91.473	Mus_pahari
ENSSPAG00000011642	rabl3	100	83.475	MGP_SPRETEiJ_G0021628	Rabl3	100	91.473	Mus_spretus
ENSSPAG00000011642	rabl3	100	87.288	ENSMPUG00000008257	RABL3	89	87.288	Mustela_putorius_furo
ENSSPAG00000011642	rabl3	100	86.441	ENSMLUG00000014113	RABL3	100	86.441	Myotis_lucifugus
ENSSPAG00000011642	rabl3	99	77.130	ENSNGAG00000001939	Rabl3	99	77.130	Nannospalax_galili
ENSSPAG00000011642	rabl3	93	98.157	ENSNBRG00000012423	rabl3	93	98.624	Neolamprologus_brichardi
ENSSPAG00000011642	rabl3	100	85.593	ENSNLEG00000031723	RABL3	100	85.593	Nomascus_leucogenys
ENSSPAG00000011642	rabl3	100	85.593	ENSMEUG00000006606	RABL3	100	85.593	Notamacropus_eugenii
ENSSPAG00000011642	rabl3	100	85.593	ENSODEG00000004758	-	100	85.593	Octodon_degus
ENSSPAG00000011642	rabl3	100	99.142	ENSONIG00000004281	rabl3	100	99.142	Oreochromis_niloticus
ENSSPAG00000011642	rabl3	99	85.043	ENSOANG00000003928	RABL3	99	85.043	Ornithorhynchus_anatinus
ENSSPAG00000011642	rabl3	100	95.279	ENSORLG00000020457	rabl3	100	95.279	Oryzias_latipes
ENSSPAG00000011642	rabl3	100	95.279	ENSORLG00020008991	rabl3	100	93.805	Oryzias_latipes_hni
ENSSPAG00000011642	rabl3	100	95.279	ENSORLG00015005649	rabl3	88	95.279	Oryzias_latipes_hsok
ENSSPAG00000011642	rabl3	100	96.567	ENSOMEG00000015066	rabl3	100	96.567	Oryzias_melastigma
ENSSPAG00000011642	rabl3	100	86.017	ENSOGAG00000005961	RABL3	100	86.017	Otolemur_garnettii
ENSSPAG00000011642	rabl3	100	88.136	ENSOARG00000019939	RABL3	100	88.136	Ovis_aries
ENSSPAG00000011642	rabl3	94	84.234	ENSPPAG00000036997	RABL3	87	84.234	Pan_paniscus
ENSSPAG00000011642	rabl3	100	87.288	ENSPPRG00000016325	RABL3	100	87.288	Panthera_pardus
ENSSPAG00000011642	rabl3	100	87.288	ENSPTIG00000018021	RABL3	100	87.288	Panthera_tigris_altaica
ENSSPAG00000011642	rabl3	100	85.593	ENSPTRG00000015272	RABL3	100	85.593	Pan_troglodytes
ENSSPAG00000011642	rabl3	100	86.017	ENSPANG00000001339	RABL3	100	86.017	Papio_anubis
ENSSPAG00000011642	rabl3	100	94.421	ENSPKIG00000007818	rabl3	100	94.421	Paramormyrops_kingsleyae
ENSSPAG00000011642	rabl3	100	86.441	ENSPSIG00000011358	RABL3	100	86.441	Pelodiscus_sinensis
ENSSPAG00000011642	rabl3	100	94.248	ENSPMGG00000015794	rabl3	100	94.248	Periophthalmus_magnuspinnatus
ENSSPAG00000011642	rabl3	100	83.475	ENSPEMG00000016913	Rabl3	100	83.475	Peromyscus_maniculatus_bairdii
ENSSPAG00000011642	rabl3	100	86.441	ENSPCIG00000018922	RABL3	100	86.441	Phascolarctos_cinereus
ENSSPAG00000011642	rabl3	100	95.279	ENSPFOG00000008586	rabl3	100	95.279	Poecilia_formosa
ENSSPAG00000011642	rabl3	100	95.279	ENSPLAG00000014482	rabl3	100	95.279	Poecilia_latipinna
ENSSPAG00000011642	rabl3	100	95.279	ENSPMEG00000002295	rabl3	100	95.279	Poecilia_mexicana
ENSSPAG00000011642	rabl3	100	95.279	ENSPREG00000014815	rabl3	100	95.279	Poecilia_reticulata
ENSSPAG00000011642	rabl3	100	86.017	ENSPPYG00000013501	RABL3	100	86.017	Pongo_abelii
ENSSPAG00000011642	rabl3	100	87.288	ENSPCOG00000022230	RABL3	100	87.288	Propithecus_coquereli
ENSSPAG00000011642	rabl3	100	85.593	ENSPVAG00000010013	RABL3	100	85.593	Pteropus_vampyrus
ENSSPAG00000011642	rabl3	100	98.712	ENSPNYG00000006659	rabl3	100	98.712	Pundamilia_nyererei
ENSSPAG00000011642	rabl3	100	96.567	ENSPNAG00000000748	rabl3	100	96.567	Pygocentrus_nattereri
ENSSPAG00000011642	rabl3	100	83.051	ENSRNOG00000026085	Rabl3	100	83.051	Rattus_norvegicus
ENSSPAG00000011642	rabl3	100	86.017	ENSRBIG00000040941	RABL3	100	86.017	Rhinopithecus_bieti
ENSSPAG00000011642	rabl3	100	86.017	ENSRROG00000043745	RABL3	100	86.017	Rhinopithecus_roxellana
ENSSPAG00000011642	rabl3	100	87.712	ENSSBOG00000004022	RABL3	100	87.712	Saimiri_boliviensis_boliviensis
ENSSPAG00000011642	rabl3	100	85.593	ENSSHAG00000012233	RABL3	100	85.593	Sarcophilus_harrisii
ENSSPAG00000011642	rabl3	100	94.421	ENSSFOG00015010171	rabl3	100	94.421	Scleropages_formosus
ENSSPAG00000011642	rabl3	100	97.009	ENSSMAG00000002403	rabl3	100	97.009	Scophthalmus_maximus
ENSSPAG00000011642	rabl3	100	98.712	ENSSDUG00000012078	rabl3	100	98.712	Seriola_dumerili
ENSSPAG00000011642	rabl3	100	99.142	ENSSLDG00000021899	rabl3	100	99.142	Seriola_lalandi_dorsalis
ENSSPAG00000011642	rabl3	100	86.864	ENSSARG00000008316	RABL3	100	86.864	Sorex_araneus
ENSSPAG00000011642	rabl3	100	86.441	ENSSPUG00000017490	RABL3	100	86.441	Sphenodon_punctatus
ENSSPAG00000011642	rabl3	100	87.712	ENSSSCG00000035258	RABL3	100	87.712	Sus_scrofa
ENSSPAG00000011642	rabl3	100	85.169	ENSTGUG00000013374	RABL3	100	85.169	Taeniopygia_guttata
ENSSPAG00000011642	rabl3	80	95.028	ENSTRUG00000007846	RABL3	100	96.875	Takifugu_rubripes
ENSSPAG00000011642	rabl3	100	73.729	ENSTBEG00000005153	RABL3	100	73.729	Tupaia_belangeri
ENSSPAG00000011642	rabl3	100	86.441	ENSUAMG00000005299	RABL3	100	86.441	Ursus_americanus
ENSSPAG00000011642	rabl3	100	86.017	ENSUMAG00000025256	RABL3	89	86.017	Ursus_maritimus
ENSSPAG00000011642	rabl3	100	87.712	ENSVPAG00000003776	RABL3	100	87.712	Vicugna_pacos
ENSSPAG00000011642	rabl3	100	87.288	ENSVVUG00000022300	RABL3	89	87.288	Vulpes_vulpes
ENSSPAG00000011642	rabl3	100	94.850	ENSXMAG00000003244	rabl3	100	94.850	Xiphophorus_maculatus