EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000011764 (Gene tree)
Gene ID: 103366847
Gene Symbol: polr1d
Alias: im:7162148|zgc:136449
Full Name: DNA-directed RNA polymerases I and III subunit RPAC2-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 6258 bases
Position: chrKK581058.1:169622-175879
Accession: 103366847
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000015601	RNA_pol_L_2	PF13656.6	1.1e-28	1	1
ENSSPAP00000015601	RNA_pol_L	PF01193.24	1.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000015852	-	769	XM_008294690	ENSSPAP00000015601	114 (aa)	XP_008292912	UPI0004973D51

Gene Model

Click here to download ENSSPAG00000011764's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000011764's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000011764	polr1d	94	32.710	ENSSPAG00000021953	polr2j	89	32.710

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000011764	polr1d	92	72.381	ENSG00000186184	POLR1D	91	72.381	Homo_sapiens
ENSSPAG00000011764	polr1d	91	90.385	ENSAPOG00000021882	polr1d	96	91.176	Acanthochromis_polyacanthus
ENSSPAG00000011764	polr1d	92	72.381	ENSAMEG00000019095	POLR1D	84	72.381	Ailuropoda_melanoleuca
ENSSPAG00000011764	polr1d	100	89.565	ENSACIG00000013328	polr1d	100	89.565	Amphilophus_citrinellus
ENSSPAG00000011764	polr1d	100	89.474	ENSAOCG00000018500	polr1d	100	89.474	Amphiprion_ocellaris
ENSSPAG00000011764	polr1d	100	91.228	ENSAPEG00000009489	polr1d	100	91.228	Amphiprion_percula
ENSSPAG00000011764	polr1d	100	92.105	ENSATEG00000019322	polr1d	100	92.105	Anabas_testudineus
ENSSPAG00000011764	polr1d	97	64.865	ENSACAG00000015753	POLR1D	96	64.865	Anolis_carolinensis
ENSSPAG00000011764	polr1d	92	72.381	ENSANAG00000024486	POLR1D	79	72.381	Aotus_nancymaae
ENSSPAG00000011764	polr1d	100	92.982	ENSACLG00000023805	polr1d	100	92.982	Astatotilapia_calliptera
ENSSPAG00000011764	polr1d	99	76.991	ENSAMXG00000036118	polr1d	98	76.991	Astyanax_mexicanus
ENSSPAG00000011764	polr1d	92	70.476	ENSBTAG00000033252	-	79	70.476	Bos_taurus
ENSSPAG00000011764	polr1d	92	70.476	ENSBTAG00000008642	POLR1D	79	70.476	Bos_taurus
ENSSPAG00000011764	polr1d	70	36.250	WBGene00010230	rpac-19	56	36.250	Caenorhabditis_elegans
ENSSPAG00000011764	polr1d	92	73.333	ENSCJAG00000044669	POLR1D	79	73.333	Callithrix_jacchus
ENSSPAG00000011764	polr1d	92	72.381	ENSCAFG00000006755	POLR1D	79	72.381	Canis_familiaris
ENSSPAG00000011764	polr1d	92	71.429	ENSCHIG00000021910	POLR1D	79	71.429	Capra_hircus
ENSSPAG00000011764	polr1d	91	74.038	ENSTSYG00000026817	-	78	74.038	Carlito_syrichta
ENSSPAG00000011764	polr1d	91	63.208	ENSTSYG00000034852	-	88	63.208	Carlito_syrichta
ENSSPAG00000011764	polr1d	56	60.938	ENSCAPG00000006058	-	65	60.938	Cavia_aperea
ENSSPAG00000011764	polr1d	56	60.938	ENSCPOG00000030450	-	65	60.938	Cavia_porcellus
ENSSPAG00000011764	polr1d	92	73.333	ENSCCAG00000021349	-	79	73.333	Cebus_capucinus
ENSSPAG00000011764	polr1d	92	55.238	ENSCCAG00000020191	-	76	55.238	Cebus_capucinus
ENSSPAG00000011764	polr1d	92	72.381	ENSCATG00000030710	-	79	72.381	Cercocebus_atys
ENSSPAG00000011764	polr1d	91	62.500	ENSCATG00000022900	-	77	62.500	Cercocebus_atys
ENSSPAG00000011764	polr1d	92	72.381	ENSCLAG00000017623	POLR1D	85	72.381	Chinchilla_lanigera
ENSSPAG00000011764	polr1d	89	78.218	ENSCPBG00000004719	POLR1D	100	78.218	Chrysemys_picta_bellii
ENSSPAG00000011764	polr1d	92	72.381	ENSCANG00000028632	-	79	72.381	Colobus_angolensis_palliatus
ENSSPAG00000011764	polr1d	91	72.115	ENSCANG00000037694	-	78	72.115	Colobus_angolensis_palliatus
ENSSPAG00000011764	polr1d	92	71.429	ENSCGRG00001021251	Polr1d	79	71.429	Cricetulus_griseus_chok1gshd
ENSSPAG00000011764	polr1d	92	71.429	ENSCGRG00000011639	Polr1d	79	71.429	Cricetulus_griseus_crigri
ENSSPAG00000011764	polr1d	93	89.623	ENSCSEG00000018268	polr1d	100	85.470	Cynoglossus_semilaevis
ENSSPAG00000011764	polr1d	100	85.088	ENSCVAG00000018527	polr1d	100	85.088	Cyprinodon_variegatus
ENSSPAG00000011764	polr1d	96	76.364	ENSDARG00000037570	polr1d	97	76.364	Danio_rerio
ENSSPAG00000011764	polr1d	96	67.890	ENSDNOG00000046247	-	81	67.890	Dasypus_novemcinctus
ENSSPAG00000011764	polr1d	96	68.807	ENSDNOG00000043676	-	82	68.807	Dasypus_novemcinctus
ENSSPAG00000011764	polr1d	91	72.115	ENSDORG00000029155	Polr1d	78	72.115	Dipodomys_ordii
ENSSPAG00000011764	polr1d	85	43.299	FBgn0086447	l(2)37Cg	91	43.299	Drosophila_melanogaster
ENSSPAG00000011764	polr1d	92	72.381	ENSETEG00000012797	POLR1D	85	72.381	Echinops_telfairi
ENSSPAG00000011764	polr1d	77	69.318	ENSEBUG00000011748	polr1d	61	69.318	Eptatretus_burgeri
ENSSPAG00000011764	polr1d	96	70.642	ENSEASG00005022487	POLR1D	84	70.642	Equus_asinus_asinus
ENSSPAG00000011764	polr1d	92	72.381	ENSEEUG00000013144	POLR1D	85	72.381	Erinaceus_europaeus
ENSSPAG00000011764	polr1d	93	82.243	ENSELUG00000005105	rpac2	94	82.243	Esox_lucius
ENSSPAG00000011764	polr1d	92	72.381	ENSFCAG00000030162	POLR1D	79	72.381	Felis_catus
ENSSPAG00000011764	polr1d	88	73.000	ENSFALG00000011463	POLR1D	99	73.000	Ficedula_albicollis
ENSSPAG00000011764	polr1d	92	71.429	ENSFDAG00000004463	POLR1D	79	71.429	Fukomys_damarensis
ENSSPAG00000011764	polr1d	100	86.842	ENSFHEG00000015410	polr1d	99	86.842	Fundulus_heteroclitus
ENSSPAG00000011764	polr1d	59	65.672	ENSGALG00000007470	POLR1D	66	65.672	Gallus_gallus
ENSSPAG00000011764	polr1d	100	87.719	ENSGAFG00000001693	polr1d	100	87.719	Gambusia_affinis
ENSSPAG00000011764	polr1d	94	89.720	ENSGACG00000018585	polr1d	91	89.720	Gasterosteus_aculeatus
ENSSPAG00000011764	polr1d	100	75.439	ENSGAGG00000008503	POLR1D	100	75.439	Gopherus_agassizii
ENSSPAG00000011764	polr1d	92	72.381	ENSGGOG00000004235	POLR1D	79	72.381	Gorilla_gorilla
ENSSPAG00000011764	polr1d	100	92.982	ENSHBUG00000002111	polr1d	100	92.982	Haplochromis_burtoni
ENSSPAG00000011764	polr1d	92	70.476	ENSHGLG00000003202	POLR1D	79	70.476	Heterocephalus_glaber_female
ENSSPAG00000011764	polr1d	92	70.476	ENSHGLG00100009393	POLR1D	79	70.476	Heterocephalus_glaber_male
ENSSPAG00000011764	polr1d	100	81.579	ENSHCOG00000003258	polr1d	100	81.579	Hippocampus_comes
ENSSPAG00000011764	polr1d	100	80.000	ENSIPUG00000014810	polr1d	100	80.000	Ictalurus_punctatus
ENSSPAG00000011764	polr1d	92	72.381	ENSSTOG00000013877	POLR1D	79	72.381	Ictidomys_tridecemlineatus
ENSSPAG00000011764	polr1d	92	70.476	ENSJJAG00000022671	-	88	70.476	Jaculus_jaculus
ENSSPAG00000011764	polr1d	96	54.545	ENSJJAG00000021667	-	63	54.545	Jaculus_jaculus
ENSSPAG00000011764	polr1d	100	83.333	ENSKMAG00000015256	polr1d	100	83.333	Kryptolebias_marmoratus
ENSSPAG00000011764	polr1d	100	92.105	ENSLBEG00000015919	polr1d	100	92.105	Labrus_bergylta
ENSSPAG00000011764	polr1d	96	66.972	ENSLACG00000006810	POLR1D	90	66.972	Latimeria_chalumnae
ENSSPAG00000011764	polr1d	62	81.690	ENSLOCG00000014976	polr1d	96	81.690	Lepisosteus_oculatus
ENSSPAG00000011764	polr1d	93	71.698	ENSLAFG00000032290	POLR1D	80	71.698	Loxodonta_africana
ENSSPAG00000011764	polr1d	92	72.381	ENSMFAG00000045264	POLR1D	81	72.381	Macaca_fascicularis
ENSSPAG00000011764	polr1d	92	72.381	ENSMMUG00000020386	POLR1D	91	72.381	Macaca_mulatta
ENSSPAG00000011764	polr1d	69	68.354	ENSMMUG00000041570	-	71	68.354	Macaca_mulatta
ENSSPAG00000011764	polr1d	92	72.381	ENSMNEG00000008630	-	79	72.381	Macaca_nemestrina
ENSSPAG00000011764	polr1d	91	57.692	ENSMNEG00000038120	-	76	57.692	Macaca_nemestrina
ENSSPAG00000011764	polr1d	92	72.381	ENSMLEG00000041048	-	79	72.381	Mandrillus_leucophaeus
ENSSPAG00000011764	polr1d	91	63.462	ENSMLEG00000032251	-	77	63.462	Mandrillus_leucophaeus
ENSSPAG00000011764	polr1d	89	93.137	ENSMAMG00000014834	polr1d	95	93.137	Mastacembelus_armatus
ENSSPAG00000011764	polr1d	89	93.137	ENSMZEG00005006638	polr1d	90	93.137	Maylandia_zebra
ENSSPAG00000011764	polr1d	81	77.174	ENSMGAG00000005322	POLR1D	84	77.174	Meleagris_gallopavo
ENSSPAG00000011764	polr1d	92	71.429	ENSMAUG00000001946	Polr1d	79	71.429	Mesocricetus_auratus
ENSSPAG00000011764	polr1d	92	71.429	ENSMICG00000016883	-	79	71.429	Microcebus_murinus
ENSSPAG00000011764	polr1d	86	60.204	ENSMICG00000007349	-	73	60.204	Microcebus_murinus
ENSSPAG00000011764	polr1d	92	70.476	ENSMOCG00000021288	Polr1d	79	70.476	Microtus_ochrogaster
ENSSPAG00000011764	polr1d	100	88.596	ENSMMOG00000009605	polr1d	100	88.596	Mola_mola
ENSSPAG00000011764	polr1d	100	73.684	ENSMODG00000023881	POLR1D	100	73.684	Monodelphis_domestica
ENSSPAG00000011764	polr1d	100	86.842	ENSMALG00000010652	polr1d	100	86.842	Monopterus_albus
ENSSPAG00000011764	polr1d	91	70.192	MGP_CAROLIEiJ_G0028034	Polr1d	78	70.192	Mus_caroli
ENSSPAG00000011764	polr1d	91	70.192	ENSMUSG00000029642	Polr1d	78	70.192	Mus_musculus
ENSSPAG00000011764	polr1d	91	70.192	MGP_PahariEiJ_G0024600	Polr1d	78	70.192	Mus_pahari
ENSSPAG00000011764	polr1d	91	71.154	MGP_SPRETEiJ_G0029032	Polr1d	78	71.154	Mus_spretus
ENSSPAG00000011764	polr1d	92	66.667	ENSMLUG00000004118	-	79	66.667	Myotis_lucifugus
ENSSPAG00000011764	polr1d	92	71.429	ENSMLUG00000027169	-	79	71.429	Myotis_lucifugus
ENSSPAG00000011764	polr1d	95	70.370	ENSNGAG00000006014	Polr1d	93	70.370	Nannospalax_galili
ENSSPAG00000011764	polr1d	100	92.982	ENSNBRG00000020327	polr1d	100	92.982	Neolamprologus_brichardi
ENSSPAG00000011764	polr1d	92	72.381	ENSNLEG00000000358	POLR1D	79	72.381	Nomascus_leucogenys
ENSSPAG00000011764	polr1d	92	72.381	ENSODEG00000005294	-	79	72.381	Octodon_degus
ENSSPAG00000011764	polr1d	92	60.952	ENSODEG00000014801	-	76	60.952	Octodon_degus
ENSSPAG00000011764	polr1d	93	79.245	ENSOANG00000008708	-	98	79.245	Ornithorhynchus_anatinus
ENSSPAG00000011764	polr1d	92	72.381	ENSOCUG00000015706	POLR1D	64	72.381	Oryctolagus_cuniculus
ENSSPAG00000011764	polr1d	100	83.333	ENSORLG00000010257	polr1d	100	83.333	Oryzias_latipes
ENSSPAG00000011764	polr1d	100	83.333	ENSORLG00020000533	polr1d	77	83.333	Oryzias_latipes_hni
ENSSPAG00000011764	polr1d	100	84.211	ENSORLG00015013267	polr1d	75	84.211	Oryzias_latipes_hsok
ENSSPAG00000011764	polr1d	100	82.456	ENSOMEG00000014912	polr1d	76	82.456	Oryzias_melastigma
ENSSPAG00000011764	polr1d	92	73.333	ENSOGAG00000014601	POLR1D	79	73.333	Otolemur_garnettii
ENSSPAG00000011764	polr1d	92	71.429	ENSOARG00000017005	POLR1D	81	71.429	Ovis_aries
ENSSPAG00000011764	polr1d	96	69.725	ENSPPAG00000028138	POLR1D	82	69.725	Pan_paniscus
ENSSPAG00000011764	polr1d	92	72.381	ENSPPRG00000003381	POLR1D	79	72.381	Panthera_pardus
ENSSPAG00000011764	polr1d	92	72.381	ENSPTIG00000018137	POLR1D	79	72.381	Panthera_tigris_altaica
ENSSPAG00000011764	polr1d	92	72.381	ENSPTRG00000005734	POLR1D	79	72.381	Pan_troglodytes
ENSSPAG00000011764	polr1d	92	72.381	ENSPANG00000020259	-	79	72.381	Papio_anubis
ENSSPAG00000011764	polr1d	91	62.500	ENSPANG00000035051	-	77	62.500	Papio_anubis
ENSSPAG00000011764	polr1d	89	79.208	ENSPKIG00000021891	polr1d	100	60.630	Paramormyrops_kingsleyae
ENSSPAG00000011764	polr1d	100	71.930	ENSPSIG00000011822	POLR1D	88	71.930	Pelodiscus_sinensis
ENSSPAG00000011764	polr1d	100	78.070	ENSPMGG00000010359	polr1d	99	78.070	Periophthalmus_magnuspinnatus
ENSSPAG00000011764	polr1d	100	69.298	ENSPMGG00000012998	POLR1D	84	69.298	Periophthalmus_magnuspinnatus
ENSSPAG00000011764	polr1d	92	71.429	ENSPEMG00000006336	-	81	71.429	Peromyscus_maniculatus_bairdii
ENSSPAG00000011764	polr1d	89	61.386	ENSPMAG00000004228	polr1d	85	61.386	Petromyzon_marinus
ENSSPAG00000011764	polr1d	100	72.807	ENSPCIG00000001673	POLR1D	100	72.807	Phascolarctos_cinereus
ENSSPAG00000011764	polr1d	100	88.596	ENSPFOG00000023343	polr1d	100	88.596	Poecilia_formosa
ENSSPAG00000011764	polr1d	100	88.596	ENSPLAG00000009675	polr1d	100	88.596	Poecilia_latipinna
ENSSPAG00000011764	polr1d	100	88.596	ENSPMEG00000004628	polr1d	100	88.596	Poecilia_mexicana
ENSSPAG00000011764	polr1d	100	88.596	ENSPREG00000022032	polr1d	100	88.596	Poecilia_reticulata
ENSSPAG00000011764	polr1d	92	70.476	ENSPCOG00000028175	POLR1D	79	70.476	Propithecus_coquereli
ENSSPAG00000011764	polr1d	100	92.982	ENSPNYG00000000107	polr1d	100	92.982	Pundamilia_nyererei
ENSSPAG00000011764	polr1d	96	74.312	ENSPNAG00000001512	polr1d	100	71.429	Pygocentrus_nattereri
ENSSPAG00000011764	polr1d	92	72.381	ENSRBIG00000036378	-	79	72.381	Rhinopithecus_bieti
ENSSPAG00000011764	polr1d	91	70.192	ENSRBIG00000000336	-	78	70.192	Rhinopithecus_bieti
ENSSPAG00000011764	polr1d	92	72.381	ENSRROG00000042232	-	79	72.381	Rhinopithecus_roxellana
ENSSPAG00000011764	polr1d	91	71.154	ENSRROG00000026751	-	78	71.154	Rhinopithecus_roxellana
ENSSPAG00000011764	polr1d	82	49.462	YNL113W	RPC19	72	46.078	Saccharomyces_cerevisiae
ENSSPAG00000011764	polr1d	87	71.717	ENSSBOG00000030146	-	73	71.717	Saimiri_boliviensis_boliviensis
ENSSPAG00000011764	polr1d	92	72.381	ENSSBOG00000028482	-	79	72.381	Saimiri_boliviensis_boliviensis
ENSSPAG00000011764	polr1d	97	71.171	ENSSHAG00000001190	POLR1D	86	71.171	Sarcophilus_harrisii
ENSSPAG00000011764	polr1d	94	76.852	ENSSFOG00015011375	polr1d	95	76.852	Scleropages_formosus
ENSSPAG00000011764	polr1d	100	91.228	ENSSMAG00000011861	polr1d	100	91.228	Scophthalmus_maximus
ENSSPAG00000011764	polr1d	100	91.228	ENSSDUG00000011930	polr1d	100	91.228	Seriola_dumerili
ENSSPAG00000011764	polr1d	99	83.333	ENSSLDG00000023871	polr1d	97	83.333	Seriola_lalandi_dorsalis
ENSSPAG00000011764	polr1d	92	72.381	ENSSARG00000007840	POLR1D	79	72.381	Sorex_araneus
ENSSPAG00000011764	polr1d	92	75.238	ENSSPUG00000005786	POLR1D	95	72.072	Sphenodon_punctatus
ENSSPAG00000011764	polr1d	92	71.429	ENSSSCG00000009310	POLR1D	79	71.429	Sus_scrofa
ENSSPAG00000011764	polr1d	82	76.344	ENSTGUG00000005450	POLR1D	97	76.344	Taeniopygia_guttata
ENSSPAG00000011764	polr1d	100	80.702	ENSTRUG00000019741	polr1d	100	80.702	Takifugu_rubripes
ENSSPAG00000011764	polr1d	92	72.381	ENSTBEG00000007006	POLR1D	85	72.381	Tupaia_belangeri
ENSSPAG00000011764	polr1d	92	72.381	ENSUAMG00000011413	POLR1D	79	72.381	Ursus_americanus
ENSSPAG00000011764	polr1d	92	72.381	ENSUMAG00000016968	POLR1D	82	72.381	Ursus_maritimus
ENSSPAG00000011764	polr1d	92	72.381	ENSVVUG00000009216	POLR1D	79	72.381	Vulpes_vulpes
ENSSPAG00000011764	polr1d	89	89.109	ENSXCOG00000011731	polr1d	78	89.109	Xiphophorus_couchianus
ENSSPAG00000011764	polr1d	89	88.119	ENSXMAG00000017538	polr1d	78	88.119	Xiphophorus_maculatus