EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000011853 (Gene tree)
Gene ID: 103374787
Gene Symbol: hnrnpub
Alias: hnrnpu|hnrpu|wu:fa66f11|wu:fc18b08|wu:fi89c08|zgc:111835|zgc:136480
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 13305 bases
Position: chrKK582426.1:119719-133023
Accession: 103374787
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000015707	SAP	PF02037.27	2.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000015961	-	5003	XM_008304938	ENSSPAP00000015707	801 (aa)	XP_008303160	UPI000497484B

Gene Model

Click here to download ENSSPAG00000011853's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000011853's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000011853	hnrnpub	88	44.000	ENSSPAG00000018378	HNRNPUL1	58	64.286
ENSSPAG00000011853	hnrnpub	75	34.754	ENSSPAG00000006972	si:ch211-107m4.1	69	37.179

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000011853	hnrnpub	86	78.261	ENSG00000153187	HNRNPU	99	64.667	Homo_sapiens
ENSSPAG00000011853	hnrnpub	100	96.504	ENSAPOG00000017400	hnrnpub	100	96.504	Acanthochromis_polyacanthus
ENSSPAG00000011853	hnrnpub	86	78.261	ENSAMEG00000009145	HNRNPU	71	78.261	Ailuropoda_melanoleuca
ENSSPAG00000011853	hnrnpub	100	79.156	ENSACIG00000012138	hnrnpub	96	87.213	Amphilophus_citrinellus
ENSSPAG00000011853	hnrnpub	100	96.629	ENSAOCG00000015843	hnrnpub	100	96.629	Amphiprion_ocellaris
ENSSPAG00000011853	hnrnpub	100	96.629	ENSAPEG00000014679	hnrnpub	100	96.629	Amphiprion_percula
ENSSPAG00000011853	hnrnpub	98	90.201	ENSATEG00000016178	hnrnpub	97	90.176	Anabas_testudineus
ENSSPAG00000011853	hnrnpub	88	66.667	ENSACAG00000004511	HNRNPU	78	61.111	Anolis_carolinensis
ENSSPAG00000011853	hnrnpub	80	58.423	ENSANAG00000033895	-	79	59.828	Aotus_nancymaae
ENSSPAG00000011853	hnrnpub	100	86.725	ENSACLG00000008165	hnrnpub	100	87.097	Astatotilapia_calliptera
ENSSPAG00000011853	hnrnpub	80	58.514	ENSBTAG00000007606	HNRNPU	73	78.261	Bos_taurus
ENSSPAG00000011853	hnrnpub	86	78.261	ENSCJAG00000016914	HNRNPU	73	78.261	Callithrix_jacchus
ENSSPAG00000011853	hnrnpub	80	58.669	ENSCAFG00020000918	HNRNPU	69	61.131	Canis_lupus_dingo
ENSSPAG00000011853	hnrnpub	80	58.514	ENSCHIG00000004900	HNRNPU	69	61.131	Capra_hircus
ENSSPAG00000011853	hnrnpub	80	58.824	ENSCPOG00000011887	HNRNPU	73	80.435	Cavia_porcellus
ENSSPAG00000011853	hnrnpub	86	78.261	ENSCCAG00000037859	-	73	78.261	Cebus_capucinus
ENSSPAG00000011853	hnrnpub	90	58.423	ENSCATG00000035273	HNRNPU	73	78.261	Cercocebus_atys
ENSSPAG00000011853	hnrnpub	86	80.435	ENSCLAG00000007100	HNRNPU	73	80.435	Chinchilla_lanigera
ENSSPAG00000011853	hnrnpub	80	58.423	ENSCSAG00000009219	HNRNPU	68	60.993	Chlorocebus_sabaeus
ENSSPAG00000011853	hnrnpub	86	78.261	ENSCHOG00000001387	HNRNPU	71	78.261	Choloepus_hoffmanni
ENSSPAG00000011853	hnrnpub	90	58.423	ENSCANG00000022780	HNRNPU	71	78.261	Colobus_angolensis_palliatus
ENSSPAG00000011853	hnrnpub	83	55.669	ENSCGRG00001020525	Hnrnpu	75	62.454	Cricetulus_griseus_chok1gshd
ENSSPAG00000011853	hnrnpub	100	77.126	ENSCSEG00000010804	hnrnpub	82	88.372	Cynoglossus_semilaevis
ENSSPAG00000011853	hnrnpub	89	86.792	ENSCVAG00000004280	hnrnpub	100	74.351	Cyprinodon_variegatus
ENSSPAG00000011853	hnrnpub	100	61.661	ENSDARG00000004735	hnrnpub	83	61.953	Danio_rerio
ENSSPAG00000011853	hnrnpub	100	61.834	ENSDARG00000015206	hnrnpua	92	63.776	Danio_rerio
ENSSPAG00000011853	hnrnpub	99	53.589	ENSDNOG00000000215	HNRNPU	80	78.261	Dasypus_novemcinctus
ENSSPAG00000011853	hnrnpub	99	50.806	ENSDORG00000015491	Hnrnpu	94	54.072	Dipodomys_ordii
ENSSPAG00000011853	hnrnpub	92	58.514	ENSETEG00000014565	HNRNPU	72	78.261	Echinops_telfairi
ENSSPAG00000011853	hnrnpub	81	58.295	ENSEASG00005003017	HNRNPU	69	60.877	Equus_asinus_asinus
ENSSPAG00000011853	hnrnpub	81	58.447	ENSECAG00000007955	HNRNPU	69	61.053	Equus_caballus
ENSSPAG00000011853	hnrnpub	100	73.090	ENSELUG00000010733	hnrnpub	100	70.478	Esox_lucius
ENSSPAG00000011853	hnrnpub	78	58.730	ENSFCAG00000002156	HNRNPU	68	60.993	Felis_catus
ENSSPAG00000011853	hnrnpub	95	59.722	ENSFDAG00000006026	HNRNPU	92	80.435	Fukomys_damarensis
ENSSPAG00000011853	hnrnpub	100	80.970	ENSFHEG00000022639	hnrnpub	100	80.414	Fundulus_heteroclitus
ENSSPAG00000011853	hnrnpub	100	72.596	ENSGMOG00000001755	hnrnpub	99	72.957	Gadus_morhua
ENSSPAG00000011853	hnrnpub	73	71.429	ENSGALG00000010671	HNRNPU	78	71.429	Gallus_gallus
ENSSPAG00000011853	hnrnpub	100	81.753	ENSGAFG00000009369	hnrnpub	100	81.513	Gambusia_affinis
ENSSPAG00000011853	hnrnpub	100	75.810	ENSGACG00000004679	hnrnpub	99	76.389	Gasterosteus_aculeatus
ENSSPAG00000011853	hnrnpub	86	78.261	ENSGGOG00000004061	HNRNPU	73	78.261	Gorilla_gorilla
ENSSPAG00000011853	hnrnpub	100	86.973	ENSHBUG00000012290	hnrnpub	100	86.973	Haplochromis_burtoni
ENSSPAG00000011853	hnrnpub	80	58.824	ENSHGLG00000010594	-	71	80.435	Heterocephalus_glaber_female
ENSSPAG00000011853	hnrnpub	94	70.909	ENSHGLG00100015093	HNRNPU	92	70.909	Heterocephalus_glaber_male
ENSSPAG00000011853	hnrnpub	100	73.197	ENSHCOG00000020091	hnrnpub	83	78.634	Hippocampus_comes
ENSSPAG00000011853	hnrnpub	80	91.489	ENSIPUG00000007749	hnrnpu	92	85.455	Ictalurus_punctatus
ENSSPAG00000011853	hnrnpub	80	56.541	ENSJJAG00000011371	Hnrnpu	94	50.448	Jaculus_jaculus
ENSSPAG00000011853	hnrnpub	100	83.130	ENSKMAG00000004532	hnrnpub	100	83.741	Kryptolebias_marmoratus
ENSSPAG00000011853	hnrnpub	100	85.592	ENSLBEG00000022520	hnrnpub	100	88.127	Labrus_bergylta
ENSSPAG00000011853	hnrnpub	99	46.882	ENSLACG00000017463	HNRNPU	99	50.376	Latimeria_chalumnae
ENSSPAG00000011853	hnrnpub	88	88.235	ENSLOCG00000016652	hnrnpua	79	70.858	Lepisosteus_oculatus
ENSSPAG00000011853	hnrnpub	87	78.261	ENSLAFG00000021377	HNRNPU	73	78.261	Loxodonta_africana
ENSSPAG00000011853	hnrnpub	90	58.423	ENSMFAG00000037308	HNRNPU	73	78.261	Macaca_fascicularis
ENSSPAG00000011853	hnrnpub	80	58.423	ENSMMUG00000021098	HNRNPU	69	60.993	Macaca_mulatta
ENSSPAG00000011853	hnrnpub	90	58.423	ENSMNEG00000043645	HNRNPU	73	78.261	Macaca_nemestrina
ENSSPAG00000011853	hnrnpub	100	90.571	ENSMAMG00000007196	hnrnpub	100	90.062	Mastacembelus_armatus
ENSSPAG00000011853	hnrnpub	100	86.725	ENSMZEG00005003185	hnrnpub	100	87.097	Maylandia_zebra
ENSSPAG00000011853	hnrnpub	83	56.158	ENSMAUG00000008842	Hnrnpu	70	60.808	Mesocricetus_auratus
ENSSPAG00000011853	hnrnpub	86	78.261	ENSMICG00000004616	HNRNPU	73	78.261	Microcebus_murinus
ENSSPAG00000011853	hnrnpub	83	56.012	ENSMOCG00000015623	Hnrnpu	77	61.279	Microtus_ochrogaster
ENSSPAG00000011853	hnrnpub	86	80.435	ENSMODG00000006515	HNRNPU	73	76.000	Monodelphis_domestica
ENSSPAG00000011853	hnrnpub	96	88.447	ENSMALG00000018243	hnrnpub	96	87.750	Monopterus_albus
ENSSPAG00000011853	hnrnpub	99	50.281	MGP_CAROLIEiJ_G0014962	Hnrnpu	69	61.279	Mus_caroli
ENSSPAG00000011853	hnrnpub	80	56.692	ENSMUSG00000039630	Hnrnpu	69	61.279	Mus_musculus
ENSSPAG00000011853	hnrnpub	80	56.391	MGP_PahariEiJ_G0028193	Hnrnpu	69	60.924	Mus_pahari
ENSSPAG00000011853	hnrnpub	80	56.692	MGP_SPRETEiJ_G0015761	Hnrnpu	69	61.279	Mus_spretus
ENSSPAG00000011853	hnrnpub	87	76.087	ENSMLUG00000000475	HNRNPU	74	76.087	Myotis_lucifugus
ENSSPAG00000011853	hnrnpub	99	52.392	ENSNGAG00000019075	Hnrnpu	69	61.170	Nannospalax_galili
ENSSPAG00000011853	hnrnpub	100	86.725	ENSNBRG00000017855	hnrnpub	100	87.097	Neolamprologus_brichardi
ENSSPAG00000011853	hnrnpub	79	80.435	ENSMEUG00000000541	HNRNPU	73	76.000	Notamacropus_eugenii
ENSSPAG00000011853	hnrnpub	100	85.554	ENSONIG00000001260	hnrnpub	100	85.430	Oreochromis_niloticus
ENSSPAG00000011853	hnrnpub	85	78.261	ENSOCUG00000014469	HNRNPU	69	78.261	Oryctolagus_cuniculus
ENSSPAG00000011853	hnrnpub	100	84.119	ENSORLG00000016114	hnrnpub	100	83.995	Oryzias_latipes
ENSSPAG00000011853	hnrnpub	100	83.395	ENSORLG00020005363	hnrnpub	100	84.367	Oryzias_latipes_hni
ENSSPAG00000011853	hnrnpub	100	83.168	ENSORLG00015001190	hnrnpub	100	84.015	Oryzias_latipes_hsok
ENSSPAG00000011853	hnrnpub	100	83.666	ENSOMEG00000014951	hnrnpub	100	85.093	Oryzias_melastigma
ENSSPAG00000011853	hnrnpub	99	51.147	ENSOGAG00000014024	HNRNPU	69	61.170	Otolemur_garnettii
ENSSPAG00000011853	hnrnpub	86	78.261	ENSOARG00000004985	HNRNPU	80	78.261	Ovis_aries
ENSSPAG00000011853	hnrnpub	86	78.261	ENSPPAG00000038652	HNRNPU	73	78.261	Pan_paniscus
ENSSPAG00000011853	hnrnpub	82	57.943	ENSPPRG00000002662	HNRNPU	67	61.032	Panthera_pardus
ENSSPAG00000011853	hnrnpub	86	78.261	ENSPTRG00000002182	HNRNPU	73	78.261	Pan_troglodytes
ENSSPAG00000011853	hnrnpub	80	58.423	ENSPANG00000011643	HNRNPU	79	59.828	Papio_anubis
ENSSPAG00000011853	hnrnpub	100	68.485	ENSPKIG00000022332	hnrnpub	82	69.985	Paramormyrops_kingsleyae
ENSSPAG00000011853	hnrnpub	100	66.949	ENSPKIG00000006885	hnrnpua	81	69.072	Paramormyrops_kingsleyae
ENSSPAG00000011853	hnrnpub	86	80.435	ENSPCIG00000008657	HNRNPU	74	76.000	Phascolarctos_cinereus
ENSSPAG00000011853	hnrnpub	100	83.231	ENSPFOG00000002908	hnrnpub	100	82.864	Poecilia_formosa
ENSSPAG00000011853	hnrnpub	100	82.742	ENSPLAG00000004160	hnrnpub	100	81.963	Poecilia_latipinna
ENSSPAG00000011853	hnrnpub	86	78.261	ENSPCOG00000018655	-	73	78.261	Propithecus_coquereli
ENSSPAG00000011853	hnrnpub	79	56.577	ENSPCOG00000003883	-	70	60.360	Propithecus_coquereli
ENSSPAG00000011853	hnrnpub	86	78.261	ENSPVAG00000002581	HNRNPU	73	78.261	Pteropus_vampyrus
ENSSPAG00000011853	hnrnpub	100	87.097	ENSPNYG00000021642	hnrnpub	100	87.469	Pundamilia_nyererei
ENSSPAG00000011853	hnrnpub	100	67.431	ENSPNAG00000001055	hnrnpub	100	62.530	Pygocentrus_nattereri
ENSSPAG00000011853	hnrnpub	80	56.692	ENSRNOG00000033790	Hnrnpu	69	61.456	Rattus_norvegicus
ENSSPAG00000011853	hnrnpub	80	57.651	ENSRBIG00000031519	HNRNPU	78	58.966	Rhinopithecus_bieti
ENSSPAG00000011853	hnrnpub	83	57.721	ENSRROG00000041642	HNRNPU	76	61.062	Rhinopithecus_roxellana
ENSSPAG00000011853	hnrnpub	100	65.030	ENSSFOG00015019004	hnrnpu	80	70.443	Scleropages_formosus
ENSSPAG00000011853	hnrnpub	100	68.029	ENSSFOG00015001124	hnrnpub	82	71.157	Scleropages_formosus
ENSSPAG00000011853	hnrnpub	85	91.594	ENSSMAG00000003607	hnrnpub	82	92.319	Scophthalmus_maximus
ENSSPAG00000011853	hnrnpub	100	89.583	ENSSDUG00000005912	hnrnpub	100	91.544	Seriola_dumerili
ENSSPAG00000011853	hnrnpub	100	89.621	ENSSLDG00000004899	hnrnpub	100	91.453	Seriola_lalandi_dorsalis
ENSSPAG00000011853	hnrnpub	83	56.388	ENSSPUG00000011393	HNRNPU	79	78.261	Sphenodon_punctatus
ENSSPAG00000011853	hnrnpub	80	58.359	ENSSSCG00000010877	HNRNPU	73	78.261	Sus_scrofa
ENSSPAG00000011853	hnrnpub	100	82.051	ENSTRUG00000007759	hnrnpub	83	86.823	Takifugu_rubripes
ENSSPAG00000011853	hnrnpub	86	78.261	ENSUAMG00000021120	HNRNPU	73	78.261	Ursus_americanus
ENSSPAG00000011853	hnrnpub	86	70.213	ENSUMAG00000012322	HNRNPU	77	70.213	Ursus_maritimus
ENSSPAG00000011853	hnrnpub	80	78.261	ENSVPAG00000010520	HNRNPU	75	78.261	Vicugna_pacos
ENSSPAG00000011853	hnrnpub	80	58.669	ENSVVUG00000026524	HNRNPU	69	61.131	Vulpes_vulpes
ENSSPAG00000011853	hnrnpub	99	51.182	ENSXETG00000011386	hnrnpu	81	67.742	Xenopus_tropicalis
ENSSPAG00000011853	hnrnpub	100	82.784	ENSXMAG00000010356	hnrnpub	100	82.662	Xiphophorus_maculatus