EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000011856 (Gene tree)
Gene ID: 103375510
Gene Symbol: sf3a1
Alias: si:dz150f13.2|wu:fc38e01|wu:fc50a11|wu:fj37c05
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 6246 bases
Position: chrKK580115.1:87342-93587
Accession: 103375510
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000015747	PRP21_like_P	PF12230.8	5.2e-52	1	1
ENSSPAP00000015747	Surp	PF01805.20	5.8e-46	1	2
ENSSPAP00000015747	Surp	PF01805.20	5.8e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000016000	-	3506	XM_008305815	ENSSPAP00000015747	785 (aa)	XP_008304037	UPI000495D82F

Gene Model

Click here to download ENSSPAG00000011856's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000011856's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000011856	sf3a1	99	85.419	ENSG00000099995	SF3A1	100	84.403	Homo_sapiens
ENSSPAG00000011856	sf3a1	100	98.346	ENSAPOG00000020465	sf3a1	100	98.346	Acanthochromis_polyacanthus
ENSSPAG00000011856	sf3a1	99	85.419	ENSAMEG00000007737	SF3A1	100	84.316	Ailuropoda_melanoleuca
ENSSPAG00000011856	sf3a1	100	96.692	ENSACIG00000020672	sf3a1	100	96.692	Amphilophus_citrinellus
ENSSPAG00000011856	sf3a1	100	98.346	ENSAOCG00000003060	sf3a1	100	98.346	Amphiprion_ocellaris
ENSSPAG00000011856	sf3a1	100	98.473	ENSAPEG00000010735	sf3a1	100	98.473	Amphiprion_percula
ENSSPAG00000011856	sf3a1	97	95.686	ENSATEG00000021201	sf3a1	96	96.078	Anabas_testudineus
ENSSPAG00000011856	sf3a1	96	85.092	ENSAPLG00000009057	SF3A1	100	84.783	Anas_platyrhynchos
ENSSPAG00000011856	sf3a1	100	81.706	ENSACAG00000009415	SF3A1	100	81.953	Anolis_carolinensis
ENSSPAG00000011856	sf3a1	99	84.910	ENSANAG00000032045	SF3A1	100	84.528	Aotus_nancymaae
ENSSPAG00000011856	sf3a1	100	96.561	ENSACLG00000012622	sf3a1	100	96.561	Astatotilapia_calliptera
ENSSPAG00000011856	sf3a1	99	89.299	ENSAMXG00000005382	sf3a1	99	89.936	Astyanax_mexicanus
ENSSPAG00000011856	sf3a1	99	85.038	ENSBTAG00000003390	SF3A1	100	84.528	Bos_taurus
ENSSPAG00000011856	sf3a1	80	46.019	WBGene00004188	prp-21	59	50.340	Caenorhabditis_elegans
ENSSPAG00000011856	sf3a1	99	84.783	ENSCJAG00000010370	SF3A1	100	84.403	Callithrix_jacchus
ENSSPAG00000011856	sf3a1	99	84.910	ENSCAFG00000012559	SF3A1	100	84.528	Canis_familiaris
ENSSPAG00000011856	sf3a1	99	84.910	ENSCAFG00020000838	SF3A1	100	84.528	Canis_lupus_dingo
ENSSPAG00000011856	sf3a1	99	85.166	ENSCHIG00000018642	SF3A1	100	84.654	Capra_hircus
ENSSPAG00000011856	sf3a1	99	85.161	ENSTSYG00000004739	SF3A1	100	84.528	Carlito_syrichta
ENSSPAG00000011856	sf3a1	95	69.200	ENSCAPG00000015414	SF3A1	97	70.027	Cavia_aperea
ENSSPAG00000011856	sf3a1	99	85.548	ENSCPOG00000014589	SF3A1	100	84.528	Cavia_porcellus
ENSSPAG00000011856	sf3a1	99	84.910	ENSCCAG00000032006	SF3A1	100	84.528	Cebus_capucinus
ENSSPAG00000011856	sf3a1	99	84.783	ENSCATG00000029241	SF3A1	100	84.403	Cercocebus_atys
ENSSPAG00000011856	sf3a1	99	85.419	ENSCLAG00000006508	SF3A1	100	84.250	Chinchilla_lanigera
ENSSPAG00000011856	sf3a1	99	84.783	ENSCSAG00000009470	SF3A1	100	84.403	Chlorocebus_sabaeus
ENSSPAG00000011856	sf3a1	58	90.476	ENSCHOG00000005201	SF3A1	60	91.221	Choloepus_hoffmanni
ENSSPAG00000011856	sf3a1	100	82.323	ENSCPBG00000007595	SF3A1	100	83.460	Chrysemys_picta_bellii
ENSSPAG00000011856	sf3a1	92	63.158	ENSCSAVG00000005608	-	92	65.854	Ciona_savignyi
ENSSPAG00000011856	sf3a1	99	84.783	ENSCANG00000033564	SF3A1	100	84.403	Colobus_angolensis_palliatus
ENSSPAG00000011856	sf3a1	97	86.184	ENSCGRG00001008933	Sf3a1	100	84.277	Cricetulus_griseus_chok1gshd
ENSSPAG00000011856	sf3a1	97	86.184	ENSCGRG00000006127	Sf3a1	100	84.277	Cricetulus_griseus_crigri
ENSSPAG00000011856	sf3a1	100	91.868	ENSCSEG00000010792	sf3a1	100	92.122	Cynoglossus_semilaevis
ENSSPAG00000011856	sf3a1	100	92.630	ENSCVAG00000004560	sf3a1	100	92.884	Cyprinodon_variegatus
ENSSPAG00000011856	sf3a1	100	88.056	ENSDARG00000041887	sf3a1	100	91.429	Danio_rerio
ENSSPAG00000011856	sf3a1	99	85.309	ENSDNOG00000010629	SF3A1	100	84.171	Dasypus_novemcinctus
ENSSPAG00000011856	sf3a1	99	85.294	ENSDORG00000005613	Sf3a1	100	84.528	Dipodomys_ordii
ENSSPAG00000011856	sf3a1	85	85.030	ENSETEG00000017194	SF3A1	95	85.928	Echinops_telfairi
ENSSPAG00000011856	sf3a1	97	67.500	ENSEBUG00000001285	sf3a1	95	69.560	Eptatretus_burgeri
ENSSPAG00000011856	sf3a1	99	85.038	ENSEASG00005010254	SF3A1	100	84.375	Equus_asinus_asinus
ENSSPAG00000011856	sf3a1	99	85.038	ENSECAG00000023962	SF3A1	100	84.375	Equus_caballus
ENSSPAG00000011856	sf3a1	74	91.803	ENSEEUG00000003159	SF3A1	83	91.803	Erinaceus_europaeus
ENSSPAG00000011856	sf3a1	100	86.819	ENSELUG00000022578	sf3a1	100	86.819	Esox_lucius
ENSSPAG00000011856	sf3a1	99	84.783	ENSFCAG00000011932	SF3A1	100	84.403	Felis_catus
ENSSPAG00000011856	sf3a1	96	84.544	ENSFALG00000006944	SF3A1	100	84.005	Ficedula_albicollis
ENSSPAG00000011856	sf3a1	99	85.032	ENSFDAG00000009560	SF3A1	100	84.403	Fukomys_damarensis
ENSSPAG00000011856	sf3a1	100	92.503	ENSFHEG00000010866	sf3a1	100	93.266	Fundulus_heteroclitus
ENSSPAG00000011856	sf3a1	100	88.280	ENSGMOG00000016024	sf3a1	100	88.550	Gadus_morhua
ENSSPAG00000011856	sf3a1	96	85.205	ENSGALG00000007937	SF3A1	100	84.257	Gallus_gallus
ENSSPAG00000011856	sf3a1	100	93.393	ENSGAFG00000009111	sf3a1	100	93.774	Gambusia_affinis
ENSSPAG00000011856	sf3a1	100	92.162	ENSGACG00000011893	sf3a1	100	92.162	Gasterosteus_aculeatus
ENSSPAG00000011856	sf3a1	96	82.609	ENSGAGG00000000762	SF3A1	99	83.136	Gopherus_agassizii
ENSSPAG00000011856	sf3a1	99	85.419	ENSGGOG00000012631	SF3A1	100	84.403	Gorilla_gorilla
ENSSPAG00000011856	sf3a1	100	96.688	ENSHBUG00000015795	sf3a1	100	96.688	Haplochromis_burtoni
ENSSPAG00000011856	sf3a1	99	84.783	ENSHGLG00000007907	SF3A1	100	84.403	Heterocephalus_glaber_female
ENSSPAG00000011856	sf3a1	99	84.783	ENSHGLG00100013799	SF3A1	100	84.403	Heterocephalus_glaber_male
ENSSPAG00000011856	sf3a1	100	90.331	ENSHCOG00000015423	sf3a1	100	90.331	Hippocampus_comes
ENSSPAG00000011856	sf3a1	98	86.140	ENSIPUG00000002470	sf3a1	99	86.917	Ictalurus_punctatus
ENSSPAG00000011856	sf3a1	97	86.013	ENSSTOG00000013892	SF3A1	100	84.654	Ictidomys_tridecemlineatus
ENSSPAG00000011856	sf3a1	99	85.290	ENSJJAG00000022566	Sf3a1	100	84.673	Jaculus_jaculus
ENSSPAG00000011856	sf3a1	100	92.494	ENSKMAG00000002400	sf3a1	100	93.257	Kryptolebias_marmoratus
ENSSPAG00000011856	sf3a1	100	94.904	ENSLBEG00000022974	sf3a1	100	94.904	Labrus_bergylta
ENSSPAG00000011856	sf3a1	100	83.924	ENSLACG00000003565	SF3A1	100	83.924	Latimeria_chalumnae
ENSSPAG00000011856	sf3a1	100	87.595	ENSLOCG00000008251	sf3a1	99	88.101	Lepisosteus_oculatus
ENSSPAG00000011856	sf3a1	99	85.166	ENSLAFG00000000448	SF3A1	100	84.528	Loxodonta_africana
ENSSPAG00000011856	sf3a1	97	56.404	ENSLAFG00000026032	-	97	55.985	Loxodonta_africana
ENSSPAG00000011856	sf3a1	99	84.910	ENSMFAG00000031979	SF3A1	100	84.528	Macaca_fascicularis
ENSSPAG00000011856	sf3a1	99	84.910	ENSMMUG00000005547	SF3A1	100	84.528	Macaca_mulatta
ENSSPAG00000011856	sf3a1	99	85.038	ENSMNEG00000037229	SF3A1	100	84.654	Macaca_nemestrina
ENSSPAG00000011856	sf3a1	99	84.783	ENSMLEG00000041908	SF3A1	100	84.403	Mandrillus_leucophaeus
ENSSPAG00000011856	sf3a1	98	96.628	ENSMAMG00000006460	sf3a1	96	96.628	Mastacembelus_armatus
ENSSPAG00000011856	sf3a1	100	96.561	ENSMZEG00005009633	sf3a1	100	96.561	Maylandia_zebra
ENSSPAG00000011856	sf3a1	96	85.205	ENSMGAG00000001330	SF3A1	99	85.566	Meleagris_gallopavo
ENSSPAG00000011856	sf3a1	93	81.880	ENSMAUG00000020317	Sf3a1	100	78.861	Mesocricetus_auratus
ENSSPAG00000011856	sf3a1	99	84.910	ENSMICG00000010038	SF3A1	100	83.774	Microcebus_murinus
ENSSPAG00000011856	sf3a1	97	85.752	ENSMOCG00000008438	Sf3a1	100	84.151	Microtus_ochrogaster
ENSSPAG00000011856	sf3a1	100	92.739	ENSMMOG00000015588	sf3a1	99	92.994	Mola_mola
ENSSPAG00000011856	sf3a1	99	83.162	ENSMODG00000009270	SF3A1	100	84.383	Monodelphis_domestica
ENSSPAG00000011856	sf3a1	100	93.544	ENSMALG00000000148	sf3a1	100	94.684	Monopterus_albus
ENSSPAG00000011856	sf3a1	99	84.576	MGP_CAROLIEiJ_G0016029	Sf3a1	99	84.459	Mus_caroli
ENSSPAG00000011856	sf3a1	99	84.576	ENSMUSG00000002129	Sf3a1	99	84.459	Mus_musculus
ENSSPAG00000011856	sf3a1	99	84.447	MGP_PahariEiJ_G0016862	Sf3a1	99	84.331	Mus_pahari
ENSSPAG00000011856	sf3a1	99	84.576	MGP_SPRETEiJ_G0016870	Sf3a1	99	84.459	Mus_spretus
ENSSPAG00000011856	sf3a1	99	84.783	ENSMPUG00000013144	SF3A1	100	84.654	Mustela_putorius_furo
ENSSPAG00000011856	sf3a1	99	85.161	ENSMLUG00000002139	SF3A1	100	84.528	Myotis_lucifugus
ENSSPAG00000011856	sf3a1	99	85.294	ENSNGAG00000016977	Sf3a1	100	84.125	Nannospalax_galili
ENSSPAG00000011856	sf3a1	100	96.188	ENSNBRG00000016642	sf3a1	100	96.188	Neolamprologus_brichardi
ENSSPAG00000011856	sf3a1	99	84.783	ENSNLEG00000003686	SF3A1	100	84.403	Nomascus_leucogenys
ENSSPAG00000011856	sf3a1	94	76.630	ENSMEUG00000008741	SF3A1	50	77.690	Notamacropus_eugenii
ENSSPAG00000011856	sf3a1	97	86.797	ENSOPRG00000016636	SF3A1	100	85.553	Ochotona_princeps
ENSSPAG00000011856	sf3a1	99	85.419	ENSODEG00000002571	SF3A1	100	84.635	Octodon_degus
ENSSPAG00000011856	sf3a1	100	97.070	ENSONIG00000010848	sf3a1	100	97.070	Oreochromis_niloticus
ENSSPAG00000011856	sf3a1	97	86.144	ENSOCUG00000007633	SF3A1	100	84.528	Oryctolagus_cuniculus
ENSSPAG00000011856	sf3a1	96	93.883	ENSORLG00000013050	sf3a1	99	94.016	Oryzias_latipes
ENSSPAG00000011856	sf3a1	99	91.410	ENSORLG00020003236	sf3a1	97	92.119	Oryzias_latipes_hni
ENSSPAG00000011856	sf3a1	100	93.503	ENSORLG00015017411	sf3a1	100	93.631	Oryzias_latipes_hsok
ENSSPAG00000011856	sf3a1	100	94.013	ENSOMEG00000013362	sf3a1	100	94.013	Oryzias_melastigma
ENSSPAG00000011856	sf3a1	99	85.290	ENSOGAG00000012931	SF3A1	100	84.654	Otolemur_garnettii
ENSSPAG00000011856	sf3a1	99	83.760	ENSOARG00000006849	SF3A1	100	83.145	Ovis_aries
ENSSPAG00000011856	sf3a1	99	84.645	ENSPPAG00000041790	SF3A1	100	83.648	Pan_paniscus
ENSSPAG00000011856	sf3a1	99	84.783	ENSPPRG00000004391	SF3A1	100	84.403	Panthera_pardus
ENSSPAG00000011856	sf3a1	98	85.013	ENSPTIG00000000844	SF3A1	99	86.405	Panthera_tigris_altaica
ENSSPAG00000011856	sf3a1	99	85.419	ENSPTRG00000014240	SF3A1	100	84.403	Pan_troglodytes
ENSSPAG00000011856	sf3a1	99	84.783	ENSPANG00000020772	SF3A1	100	84.403	Papio_anubis
ENSSPAG00000011856	sf3a1	82	91.209	ENSPSIG00000012803	SF3A1	99	91.209	Pelodiscus_sinensis
ENSSPAG00000011856	sf3a1	97	90.838	ENSPMGG00000023096	sf3a1	100	91.623	Periophthalmus_magnuspinnatus
ENSSPAG00000011856	sf3a1	97	86.053	ENSPEMG00000009494	Sf3a1	100	84.151	Peromyscus_maniculatus_bairdii
ENSSPAG00000011856	sf3a1	69	77.879	ENSPMAG00000007139	-	100	73.344	Petromyzon_marinus
ENSSPAG00000011856	sf3a1	97	84.837	ENSPCIG00000022692	SF3A1	100	84.761	Phascolarctos_cinereus
ENSSPAG00000011856	sf3a1	100	84.331	ENSPFOG00000016768	sf3a1	100	84.331	Poecilia_formosa
ENSSPAG00000011856	sf3a1	100	94.282	ENSPLAG00000017268	sf3a1	100	94.663	Poecilia_latipinna
ENSSPAG00000011856	sf3a1	96	94.586	ENSPMEG00000019811	sf3a1	100	94.586	Poecilia_mexicana
ENSSPAG00000011856	sf3a1	100	94.028	ENSPREG00000010347	sf3a1	100	94.409	Poecilia_reticulata
ENSSPAG00000011856	sf3a1	99	84.783	ENSPPYG00000011707	SF3A1	100	84.403	Pongo_abelii
ENSSPAG00000011856	sf3a1	58	85.537	ENSPCAG00000003266	SF3A1	57	85.537	Procavia_capensis
ENSSPAG00000011856	sf3a1	99	84.655	ENSPCOG00000026630	SF3A1	100	83.522	Propithecus_coquereli
ENSSPAG00000011856	sf3a1	95	85.542	ENSPVAG00000017719	SF3A1	94	86.078	Pteropus_vampyrus
ENSSPAG00000011856	sf3a1	100	96.433	ENSPNYG00000018706	sf3a1	100	96.433	Pundamilia_nyererei
ENSSPAG00000011856	sf3a1	99	89.299	ENSPNAG00000003721	sf3a1	99	89.554	Pygocentrus_nattereri
ENSSPAG00000011856	sf3a1	99	84.774	ENSRNOG00000005218	Sf3a1	99	84.091	Rattus_norvegicus
ENSSPAG00000011856	sf3a1	99	84.783	ENSRBIG00000032167	SF3A1	100	84.403	Rhinopithecus_bieti
ENSSPAG00000011856	sf3a1	99	84.783	ENSRROG00000044908	SF3A1	100	84.403	Rhinopithecus_roxellana
ENSSPAG00000011856	sf3a1	94	86.122	ENSSBOG00000021960	SF3A1	98	86.976	Saimiri_boliviensis_boliviensis
ENSSPAG00000011856	sf3a1	100	80.203	ENSSHAG00000003666	SF3A1	97	83.791	Sarcophilus_harrisii
ENSSPAG00000011856	sf3a1	100	89.633	ENSSFOG00015004579	sf3a1	100	90.392	Scleropages_formosus
ENSSPAG00000011856	sf3a1	100	91.975	ENSSMAG00000004275	sf3a1	100	92.102	Scophthalmus_maximus
ENSSPAG00000011856	sf3a1	100	97.452	ENSSDUG00000022219	sf3a1	100	97.452	Seriola_dumerili
ENSSPAG00000011856	sf3a1	100	97.452	ENSSLDG00000012642	sf3a1	100	97.452	Seriola_lalandi_dorsalis
ENSSPAG00000011856	sf3a1	98	82.687	ENSSARG00000005960	SF3A1	100	82.817	Sorex_araneus
ENSSPAG00000011856	sf3a1	97	84.395	ENSSPUG00000018863	SF3A1	100	84.558	Sphenodon_punctatus
ENSSPAG00000011856	sf3a1	99	84.910	ENSSSCG00000010002	SF3A1	100	84.528	Sus_scrofa
ENSSPAG00000011856	sf3a1	96	85.112	ENSTGUG00000010547	SF3A1	99	85.603	Taeniopygia_guttata
ENSSPAG00000011856	sf3a1	100	90.701	ENSTRUG00000006118	sf3a1	100	90.573	Takifugu_rubripes
ENSSPAG00000011856	sf3a1	62	89.179	ENSTNIG00000005713	sf3a1	88	88.636	Tetraodon_nigroviridis
ENSSPAG00000011856	sf3a1	99	78.323	ENSTBEG00000012771	SF3A1	100	77.987	Tupaia_belangeri
ENSSPAG00000011856	sf3a1	99	84.674	ENSTTRG00000001535	SF3A1	100	84.296	Tursiops_truncatus
ENSSPAG00000011856	sf3a1	99	83.016	ENSUAMG00000006750	SF3A1	99	83.523	Ursus_americanus
ENSSPAG00000011856	sf3a1	99	84.981	ENSUMAG00000016665	SF3A1	99	85.204	Ursus_maritimus
ENSSPAG00000011856	sf3a1	99	84.910	ENSVVUG00000003075	SF3A1	100	84.528	Vulpes_vulpes
ENSSPAG00000011856	sf3a1	100	79.799	ENSXETG00000016144	sf3a1	96	85.020	Xenopus_tropicalis
ENSSPAG00000011856	sf3a1	100	93.393	ENSXCOG00000015653	sf3a1	100	93.774	Xiphophorus_couchianus
ENSSPAG00000011856	sf3a1	100	93.647	ENSXMAG00000002753	sf3a1	100	94.028	Xiphophorus_maculatus