EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000011938 (Gene tree)
Gene ID: 103357343
Gene Symbol: rtca
Alias: cb158|rtcd1|sb:cb158|wu:fc62c03
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 11570 bases
Position: chrKK580319.1:423216-434785
Accession: 103357343
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000015846	RTC	PF01137.21	2.4e-87	1	1
ENSSPAP00000015846	RTC_insert	PF05189.13	1.1e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000016101	-	4096	XM_008281866	ENSSPAP00000015846	366 (aa)	XP_008280088	UPI000497BB61

Gene Model

Click here to download ENSSPAG00000011938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000011938's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000011938	rtca	99	70.492	ENSG00000137996	RTCA	100	70.492	Homo_sapiens
ENSSPAG00000011938	rtca	100	93.169	ENSAPOG00000001345	rtca	100	93.169	Acanthochromis_polyacanthus
ENSSPAG00000011938	rtca	73	71.375	ENSAMEG00000008855	RTCA	100	71.375	Ailuropoda_melanoleuca
ENSSPAG00000011938	rtca	99	92.857	ENSACIG00000019643	rtca	100	92.857	Amphilophus_citrinellus
ENSSPAG00000011938	rtca	100	94.536	ENSAOCG00000014979	rtca	100	94.536	Amphiprion_ocellaris
ENSSPAG00000011938	rtca	100	94.262	ENSAPEG00000006945	rtca	100	94.262	Amphiprion_percula
ENSSPAG00000011938	rtca	95	94.269	ENSATEG00000006315	rtca	96	94.269	Anabas_testudineus
ENSSPAG00000011938	rtca	95	67.139	ENSAPLG00000015430	RTCA	100	67.139	Anas_platyrhynchos
ENSSPAG00000011938	rtca	99	70.219	ENSANAG00000025446	RTCA	100	70.219	Aotus_nancymaae
ENSSPAG00000011938	rtca	100	92.623	ENSACLG00000020770	rtca	100	92.623	Astatotilapia_calliptera
ENSSPAG00000011938	rtca	99	78.846	ENSAMXG00000043271	rtca	100	78.846	Astyanax_mexicanus
ENSSPAG00000011938	rtca	99	71.038	ENSBTAG00000006321	RTCA	100	71.038	Bos_taurus
ENSSPAG00000011938	rtca	99	70.492	ENSCJAG00000003398	RTCA	100	70.492	Callithrix_jacchus
ENSSPAG00000011938	rtca	99	69.945	ENSCAFG00000020010	RTCA	68	69.945	Canis_familiaris
ENSSPAG00000011938	rtca	99	69.945	ENSCAFG00020011528	RTCA	57	69.945	Canis_lupus_dingo
ENSSPAG00000011938	rtca	99	70.765	ENSCHIG00000018937	RTCA	100	70.765	Capra_hircus
ENSSPAG00000011938	rtca	99	69.945	ENSTSYG00000011305	RTCA	100	69.945	Carlito_syrichta
ENSSPAG00000011938	rtca	99	69.945	ENSCCAG00000021844	RTCA	100	69.945	Cebus_capucinus
ENSSPAG00000011938	rtca	99	68.338	ENSCATG00000019364	RTCA	100	70.874	Cercocebus_atys
ENSSPAG00000011938	rtca	86	71.835	ENSCLAG00000006125	RTCA	100	71.835	Chinchilla_lanigera
ENSSPAG00000011938	rtca	99	70.492	ENSCSAG00000001509	RTCA	100	70.492	Chlorocebus_sabaeus
ENSSPAG00000011938	rtca	99	69.126	ENSCHOG00000005211	RTCA	100	69.126	Choloepus_hoffmanni
ENSSPAG00000011938	rtca	99	67.671	ENSCPBG00000026658	RTCA	100	67.671	Chrysemys_picta_bellii
ENSSPAG00000011938	rtca	98	55.710	ENSCING00000007875	-	98	55.710	Ciona_intestinalis
ENSSPAG00000011938	rtca	98	55.153	ENSCSAVG00000007269	-	98	55.153	Ciona_savignyi
ENSSPAG00000011938	rtca	99	70.219	ENSCANG00000040106	RTCA	100	70.219	Colobus_angolensis_palliatus
ENSSPAG00000011938	rtca	73	70.260	ENSCGRG00001013163	Rtca	85	70.260	Cricetulus_griseus_chok1gshd
ENSSPAG00000011938	rtca	98	84.358	ENSCSEG00000000530	rtca	96	84.358	Cynoglossus_semilaevis
ENSSPAG00000011938	rtca	99	72.951	ENSCVAG00000021809	rtca	100	72.951	Cyprinodon_variegatus
ENSSPAG00000011938	rtca	99	79.121	ENSDARG00000002215	rtca	100	79.121	Danio_rerio
ENSSPAG00000011938	rtca	99	70.765	ENSDNOG00000000456	RTCA	100	70.765	Dasypus_novemcinctus
ENSSPAG00000011938	rtca	99	69.945	ENSDORG00000005448	Rtca	100	69.945	Dipodomys_ordii
ENSSPAG00000011938	rtca	99	39.669	FBgn0025630	Rtca	99	39.669	Drosophila_melanogaster
ENSSPAG00000011938	rtca	93	52.616	ENSEBUG00000008556	rtca	95	52.616	Eptatretus_burgeri
ENSSPAG00000011938	rtca	99	70.492	ENSEASG00005015926	RTCA	100	70.492	Equus_asinus_asinus
ENSSPAG00000011938	rtca	99	70.492	ENSECAG00000019831	RTCA	100	70.492	Equus_caballus
ENSSPAG00000011938	rtca	91	63.006	ENSEEUG00000001165	RTCA	100	63.006	Erinaceus_europaeus
ENSSPAG00000011938	rtca	99	78.177	ENSELUG00000003741	rtca	99	78.177	Esox_lucius
ENSSPAG00000011938	rtca	99	70.492	ENSFCAG00000024460	RTCA	100	70.492	Felis_catus
ENSSPAG00000011938	rtca	92	68.935	ENSFALG00000002443	RTCA	91	68.935	Ficedula_albicollis
ENSSPAG00000011938	rtca	99	69.672	ENSFDAG00000012070	-	100	69.672	Fukomys_damarensis
ENSSPAG00000011938	rtca	98	56.354	ENSFDAG00000016084	-	100	56.354	Fukomys_damarensis
ENSSPAG00000011938	rtca	70	75.486	ENSFHEG00000002868	rtca	92	83.721	Fundulus_heteroclitus
ENSSPAG00000011938	rtca	99	78.571	ENSGMOG00000013264	rtca	100	78.571	Gadus_morhua
ENSSPAG00000011938	rtca	99	67.671	ENSGALG00000005277	RTCA	100	67.671	Gallus_gallus
ENSSPAG00000011938	rtca	100	90.984	ENSGAFG00000011853	rtca	100	90.984	Gambusia_affinis
ENSSPAG00000011938	rtca	99	89.286	ENSGACG00000013497	rtca	100	89.286	Gasterosteus_aculeatus
ENSSPAG00000011938	rtca	80	67.235	ENSGAGG00000023306	RTCA	100	67.235	Gopherus_agassizii
ENSSPAG00000011938	rtca	99	69.945	ENSGGOG00000009546	-	100	69.945	Gorilla_gorilla
ENSSPAG00000011938	rtca	99	69.399	ENSGGOG00000044018	-	100	69.399	Gorilla_gorilla
ENSSPAG00000011938	rtca	100	92.350	ENSHBUG00000002114	rtca	100	92.350	Haplochromis_burtoni
ENSSPAG00000011938	rtca	99	69.945	ENSHGLG00000002617	RTCA	100	69.945	Heterocephalus_glaber_female
ENSSPAG00000011938	rtca	99	69.945	ENSHGLG00100006056	RTCA	100	69.945	Heterocephalus_glaber_male
ENSSPAG00000011938	rtca	99	78.082	ENSHCOG00000020628	rtca	90	78.082	Hippocampus_comes
ENSSPAG00000011938	rtca	99	78.297	ENSIPUG00000024803	rtca	100	78.297	Ictalurus_punctatus
ENSSPAG00000011938	rtca	99	65.574	ENSSTOG00000013528	-	100	65.574	Ictidomys_tridecemlineatus
ENSSPAG00000011938	rtca	99	62.022	ENSSTOG00000033099	-	100	62.022	Ictidomys_tridecemlineatus
ENSSPAG00000011938	rtca	99	50.959	ENSJJAG00000016178	Rtca	100	50.959	Jaculus_jaculus
ENSSPAG00000011938	rtca	100	89.344	ENSKMAG00000006651	rtca	100	89.344	Kryptolebias_marmoratus
ENSSPAG00000011938	rtca	99	87.812	ENSLBEG00000028971	rtca	99	87.812	Labrus_bergylta
ENSSPAG00000011938	rtca	87	87.147	ENSLBEG00000002448	-	99	87.147	Labrus_bergylta
ENSSPAG00000011938	rtca	99	67.671	ENSLACG00000013666	RTCA	100	67.671	Latimeria_chalumnae
ENSSPAG00000011938	rtca	99	75.342	ENSLOCG00000000093	rtca	99	75.342	Lepisosteus_oculatus
ENSSPAG00000011938	rtca	99	69.399	ENSLAFG00000001473	RTCA	100	69.399	Loxodonta_africana
ENSSPAG00000011938	rtca	99	70.492	ENSMFAG00000034132	RTCA	100	70.492	Macaca_fascicularis
ENSSPAG00000011938	rtca	99	70.492	ENSMMUG00000019105	RTCA	100	70.492	Macaca_mulatta
ENSSPAG00000011938	rtca	84	70.550	ENSMNEG00000037163	RTCA	100	70.550	Macaca_nemestrina
ENSSPAG00000011938	rtca	99	57.650	ENSMLEG00000042151	RTCA	100	57.650	Mandrillus_leucophaeus
ENSSPAG00000011938	rtca	99	95.055	ENSMAMG00000016536	rtca	100	95.055	Mastacembelus_armatus
ENSSPAG00000011938	rtca	100	92.623	ENSMZEG00005017945	rtca	100	92.623	Maylandia_zebra
ENSSPAG00000011938	rtca	87	67.925	ENSMGAG00000006892	RTCA	99	67.925	Meleagris_gallopavo
ENSSPAG00000011938	rtca	99	70.219	ENSMAUG00000008488	Rtca	100	70.219	Mesocricetus_auratus
ENSSPAG00000011938	rtca	84	71.197	ENSMICG00000008643	RTCA	100	71.197	Microcebus_murinus
ENSSPAG00000011938	rtca	99	68.852	ENSMOCG00000016660	Rtca	100	68.852	Microtus_ochrogaster
ENSSPAG00000011938	rtca	84	90.554	ENSMMOG00000007750	rtca	100	90.554	Mola_mola
ENSSPAG00000011938	rtca	99	69.945	ENSMODG00000003557	RTCA	100	69.945	Monodelphis_domestica
ENSSPAG00000011938	rtca	99	93.132	ENSMALG00000020844	rtca	100	93.132	Monopterus_albus
ENSSPAG00000011938	rtca	99	68.852	MGP_CAROLIEiJ_G0025565	Rtca	100	68.852	Mus_caroli
ENSSPAG00000011938	rtca	99	68.579	ENSMUSG00000000339	Rtca	100	68.579	Mus_musculus
ENSSPAG00000011938	rtca	99	68.852	MGP_PahariEiJ_G0027011	Rtca	100	68.852	Mus_pahari
ENSSPAG00000011938	rtca	99	68.852	MGP_SPRETEiJ_G0026515	Rtca	100	68.852	Mus_spretus
ENSSPAG00000011938	rtca	99	70.492	ENSMPUG00000012119	RTCA	100	70.492	Mustela_putorius_furo
ENSSPAG00000011938	rtca	99	67.847	ENSMLUG00000009922	RTCA	100	67.847	Myotis_lucifugus
ENSSPAG00000011938	rtca	99	69.399	ENSNGAG00000011540	Rtca	99	69.399	Nannospalax_galili
ENSSPAG00000011938	rtca	100	92.350	ENSNBRG00000003062	rtca	100	92.350	Neolamprologus_brichardi
ENSSPAG00000011938	rtca	99	70.219	ENSNLEG00000031426	RTCA	100	70.219	Nomascus_leucogenys
ENSSPAG00000011938	rtca	73	67.286	ENSOPRG00000012092	RTCA	71	67.286	Ochotona_princeps
ENSSPAG00000011938	rtca	95	70.977	ENSODEG00000006990	RTCA	96	71.225	Octodon_degus
ENSSPAG00000011938	rtca	100	92.623	ENSONIG00000007753	rtca	100	92.623	Oreochromis_niloticus
ENSSPAG00000011938	rtca	86	71.293	ENSOANG00000012055	RTCA	98	71.293	Ornithorhynchus_anatinus
ENSSPAG00000011938	rtca	99	70.492	ENSOCUG00000014247	RTCA	100	70.492	Oryctolagus_cuniculus
ENSSPAG00000011938	rtca	99	89.560	ENSORLG00000013605	rtca	100	89.560	Oryzias_latipes
ENSSPAG00000011938	rtca	99	89.835	ENSORLG00020001904	rtca	100	89.835	Oryzias_latipes_hni
ENSSPAG00000011938	rtca	99	89.560	ENSORLG00015021064	rtca	100	89.560	Oryzias_latipes_hsok
ENSSPAG00000011938	rtca	99	90.385	ENSOMEG00000000756	rtca	100	90.385	Oryzias_melastigma
ENSSPAG00000011938	rtca	99	64.481	ENSOGAG00000005627	RTCA	100	64.481	Otolemur_garnettii
ENSSPAG00000011938	rtca	86	71.384	ENSOARG00000018122	RTCA	100	71.384	Ovis_aries
ENSSPAG00000011938	rtca	99	67.282	ENSPPAG00000035119	RTCA	100	69.579	Pan_paniscus
ENSSPAG00000011938	rtca	99	70.765	ENSPPRG00000000350	RTCA	100	70.765	Panthera_pardus
ENSSPAG00000011938	rtca	99	70.219	ENSPTIG00000012816	RTCA	100	70.219	Panthera_tigris_altaica
ENSSPAG00000011938	rtca	99	67.282	ENSPTRG00000001004	RTCA	100	69.579	Pan_troglodytes
ENSSPAG00000011938	rtca	99	70.492	ENSPANG00000000346	RTCA	100	70.492	Papio_anubis
ENSSPAG00000011938	rtca	99	80.769	ENSPKIG00000001653	rtca	100	80.769	Paramormyrops_kingsleyae
ENSSPAG00000011938	rtca	99	67.397	ENSPSIG00000011408	RTCA	100	67.397	Pelodiscus_sinensis
ENSSPAG00000011938	rtca	99	69.399	ENSPEMG00000018582	Rtca	100	69.399	Peromyscus_maniculatus_bairdii
ENSSPAG00000011938	rtca	98	56.787	ENSPMAG00000009110	rtca	98	56.787	Petromyzon_marinus
ENSSPAG00000011938	rtca	99	70.219	ENSPCIG00000007684	RTCA	100	70.219	Phascolarctos_cinereus
ENSSPAG00000011938	rtca	99	91.781	ENSPFOG00000004824	rtca	100	91.781	Poecilia_formosa
ENSSPAG00000011938	rtca	100	91.803	ENSPLAG00000011753	rtca	100	91.803	Poecilia_latipinna
ENSSPAG00000011938	rtca	100	91.803	ENSPMEG00000020469	rtca	100	91.803	Poecilia_mexicana
ENSSPAG00000011938	rtca	100	91.530	ENSPREG00000001365	rtca	100	91.530	Poecilia_reticulata
ENSSPAG00000011938	rtca	99	70.492	ENSPPYG00000001115	RTCA	100	70.492	Pongo_abelii
ENSSPAG00000011938	rtca	99	67.486	ENSPCAG00000005076	RTCA	100	67.486	Procavia_capensis
ENSSPAG00000011938	rtca	99	70.765	ENSPCOG00000005603	RTCA	100	70.765	Propithecus_coquereli
ENSSPAG00000011938	rtca	99	66.755	ENSPVAG00000009478	RTCA	100	66.755	Pteropus_vampyrus
ENSSPAG00000011938	rtca	100	92.623	ENSPNYG00000004722	rtca	100	92.623	Pundamilia_nyererei
ENSSPAG00000011938	rtca	99	79.121	ENSPNAG00000022270	rtca	100	79.121	Pygocentrus_nattereri
ENSSPAG00000011938	rtca	99	68.579	ENSRNOG00000014575	Rtca	100	68.579	Rattus_norvegicus
ENSSPAG00000011938	rtca	99	67.546	ENSRBIG00000041180	RTCA	100	69.903	Rhinopithecus_bieti
ENSSPAG00000011938	rtca	99	69.945	ENSRROG00000024929	RTCA	100	69.945	Rhinopithecus_roxellana
ENSSPAG00000011938	rtca	99	69.672	ENSSBOG00000028626	RTCA	100	69.672	Saimiri_boliviensis_boliviensis
ENSSPAG00000011938	rtca	99	70.219	ENSSHAG00000001758	RTCA	100	70.219	Sarcophilus_harrisii
ENSSPAG00000011938	rtca	99	86.150	ENSSMAG00000014680	rtca	98	86.150	Scophthalmus_maximus
ENSSPAG00000011938	rtca	98	93.017	ENSSDUG00000015585	rtca	98	92.541	Seriola_dumerili
ENSSPAG00000011938	rtca	95	93.123	ENSSLDG00000018985	rtca	95	93.123	Seriola_lalandi_dorsalis
ENSSPAG00000011938	rtca	86	66.562	ENSSARG00000013993	RTCA	100	66.562	Sorex_araneus
ENSSPAG00000011938	rtca	99	70.765	ENSSSCG00000006865	RTCA	100	70.765	Sus_scrofa
ENSSPAG00000011938	rtca	99	69.315	ENSTGUG00000005154	RTCA	100	69.315	Taeniopygia_guttata
ENSSPAG00000011938	rtca	99	89.560	ENSTRUG00000008799	rtca	100	89.560	Takifugu_rubripes
ENSSPAG00000011938	rtca	99	86.538	ENSTNIG00000004725	rtca	100	86.538	Tetraodon_nigroviridis
ENSSPAG00000011938	rtca	57	58.095	ENSTBEG00000000943	RTCA	59	58.095	Tupaia_belangeri
ENSSPAG00000011938	rtca	99	68.338	ENSTTRG00000015327	RTCA	100	68.338	Tursiops_truncatus
ENSSPAG00000011938	rtca	93	69.388	ENSUAMG00000017265	RTCA	96	69.388	Ursus_americanus
ENSSPAG00000011938	rtca	99	69.945	ENSUMAG00000007881	RTCA	100	69.945	Ursus_maritimus
ENSSPAG00000011938	rtca	86	63.407	ENSVPAG00000001039	RTCA	84	63.407	Vicugna_pacos
ENSSPAG00000011938	rtca	99	69.945	ENSVVUG00000022041	RTCA	68	69.945	Vulpes_vulpes
ENSSPAG00000011938	rtca	99	57.221	ENSXETG00000031661	RTCA	99	57.221	Xenopus_tropicalis
ENSSPAG00000011938	rtca	99	79.396	ENSXCOG00000008002	rtca	100	79.396	Xiphophorus_couchianus
ENSSPAG00000011938	rtca	100	91.257	ENSXMAG00000005482	rtca	100	91.257	Xiphophorus_maculatus