EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSPAG00000012144 (Gene tree)
Gene ID
103363506
Gene Symbol
puf60b
Alias
fe37c05|si:ch211-12p8.2|si:zc12p8.2|wu:fb33e11|wu:fe37c05|zgc:86806
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Stegastes_partitus
Status
putative
Strand
Minus strand
Length
9099 bases
Position
chrKK580737.1:85923-95021
Accession
103363506
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSPAP00000016142RRM_1PF00076.221.5e-4412
ENSSPAP00000016142RRM_1PF00076.221.5e-4422
ENSSPAP00000016099RRM_1PF00076.221.6e-4412
ENSSPAP00000016099RRM_1PF00076.221.6e-4422
ENSSPAP00000016117RRM_1PF00076.221.7e-4412
ENSSPAP00000016117RRM_1PF00076.221.7e-4422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSPAT00000016358-2589XM_008290296ENSSPAP00000016099527 (aa)XP_008288518UPI0004981F44
ENSSPAT00000016403-2441XM_008290298ENSSPAP00000016142523 (aa)XP_008288520UPI000496BC6C
ENSSPAT00000016377-2492XM_008290295ENSSPAP00000016117540 (aa)XP_008288517UPI0004955268
Gene Model
Click here to download ENSSPAG00000012144's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000012144's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSPAG00000012144puf60b5238.235ENSSPAG00000005241-6238.235
ENSSPAG00000012144puf60b5535.294ENSSPAG00000022519u2af2a6337.255
ENSSPAG00000012144puf60b10081.698ENSSPAG00000020285-10081.698
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSPAG00000012144puf60b10083.925ENSG00000179950PUF6010083.364Homo_sapiens
ENSSPAG00000012144puf60b10097.037ENSAPOG00000001713puf60b10097.037Acanthochromis_polyacanthus
ENSSPAG00000012144puf60b10082.056ENSAMEG00000006406PUF609381.331Ailuropoda_melanoleuca
ENSSPAG00000012144puf60b10076.136ENSACIG00000003263-9975.803Amphilophus_citrinellus
ENSSPAG00000012144puf60b10095.636ENSACIG00000021705puf60b10095.636Amphilophus_citrinellus
ENSSPAG00000012144puf60b10081.818ENSAOCG00000015558-10081.146Amphiprion_ocellaris
ENSSPAG00000012144puf60b10097.037ENSAOCG00000005395puf60b10097.037Amphiprion_ocellaris
ENSSPAG00000012144puf60b9875.439ENSAPEG00000001836-9975.240Amphiprion_percula
ENSSPAG00000012144puf60b10093.499ENSAPEG00000011923puf60b10093.499Amphiprion_percula
ENSSPAG00000012144puf60b10096.774ENSATEG00000001730puf60b10096.111Anabas_testudineus
ENSSPAG00000012144puf60b10080.979ENSATEG00000006303-10080.407Anabas_testudineus
ENSSPAG00000012144puf60b10084.673ENSAPLG00000010150PUF6010083.364Anas_platyrhynchos
ENSSPAG00000012144puf60b10083.551ENSACAG00000001645PUF609683.086Anolis_carolinensis
ENSSPAG00000012144puf60b10083.738ENSANAG00000018626PUF6010083.178Aotus_nancymaae
ENSSPAG00000012144puf60b10095.636ENSACLG00000004462puf60b10095.636Astatotilapia_calliptera
ENSSPAG00000012144puf60b10078.229ENSAMXG00000041030puf60b10077.306Astyanax_mexicanus
ENSSPAG00000012144puf60b10084.601ENSAMXG00000036570puf60a10084.743Astyanax_mexicanus
ENSSPAG00000012144puf60b10083.925ENSBTAG00000037493PUF609982.625Bos_taurus
ENSSPAG00000012144puf60b9346.400WBGene00004389rnp-67554.440Caenorhabditis_elegans
ENSSPAG00000012144puf60b10083.925ENSCJAG00000021485PUF609882.625Callithrix_jacchus
ENSSPAG00000012144puf60b10083.738ENSCAFG00000001400PUF609382.440Canis_familiaris
ENSSPAG00000012144puf60b10084.112ENSCAFG00020018754PUF609882.810Canis_lupus_dingo
ENSSPAG00000012144puf60b10083.925ENSCHIG00000001618PUF608782.625Capra_hircus
ENSSPAG00000012144puf60b10084.112ENSTSYG00000011912PUF6010083.551Carlito_syrichta
ENSSPAG00000012144puf60b10079.592ENSCPOG00000014613PUF609478.349Cavia_porcellus
ENSSPAG00000012144puf60b10084.112ENSCCAG00000007744PUF609882.810Cebus_capucinus
ENSSPAG00000012144puf60b10083.925ENSCATG00000035405PUF609882.625Cercocebus_atys
ENSSPAG00000012144puf60b10084.299ENSCLAG00000009154PUF609382.994Chinchilla_lanigera
ENSSPAG00000012144puf60b10083.925ENSCSAG00000008878PUF6010083.364Chlorocebus_sabaeus
ENSSPAG00000012144puf60b10083.738ENSCPBG00000005595PUF609982.385Chrysemys_picta_bellii
ENSSPAG00000012144puf60b6261.774ENSCING00000002156-8761.774Ciona_intestinalis
ENSSPAG00000012144puf60b9948.244ENSCING00000008436-9947.156Ciona_intestinalis
ENSSPAG00000012144puf60b9853.947ENSCSAVG00000001385-9953.571Ciona_savignyi
ENSSPAG00000012144puf60b7857.028ENSCSAVG00000004765-9748.692Ciona_savignyi
ENSSPAG00000012144puf60b8183.028ENSCANG00000041843PUF6010082.339Colobus_angolensis_palliatus
ENSSPAG00000012144puf60b10084.486ENSCGRG00001017442Puf609383.179Cricetulus_griseus_chok1gshd
ENSSPAG00000012144puf60b10084.486ENSCGRG00000003717Puf609383.179Cricetulus_griseus_crigri
ENSSPAG00000012144puf60b9975.475ENSCSEG00000014845-9177.040Cynoglossus_semilaevis
ENSSPAG00000012144puf60b10096.205ENSCSEG00000019887puf60b9495.362Cynoglossus_semilaevis
ENSSPAG00000012144puf60b9179.876ENSCVAG00000001560-9877.593Cyprinodon_variegatus
ENSSPAG00000012144puf60b10094.687ENSCVAG00000009386puf60b10094.118Cyprinodon_variegatus
ENSSPAG00000012144puf60b10084.944ENSDARG00000032175puf60a9993.191Danio_rerio
ENSSPAG00000012144puf60b10079.298ENSDARG00000001241puf60b9997.619Danio_rerio
ENSSPAG00000012144puf60b9969.434ENSDNOG00000043278PUF609168.868Dasypus_novemcinctus
ENSSPAG00000012144puf60b10084.486ENSDORG00000004585Puf609583.179Dipodomys_ordii
ENSSPAG00000012144puf60b9867.248ENSEBUG00000005470-9264.312Eptatretus_burgeri
ENSSPAG00000012144puf60b9861.285ENSEBUG00000014291puf60b8463.986Eptatretus_burgeri
ENSSPAG00000012144puf60b10084.112ENSEASG00005009695PUF609882.810Equus_asinus_asinus
ENSSPAG00000012144puf60b10084.112ENSECAG00000024681PUF609882.689Equus_caballus
ENSSPAG00000012144puf60b10088.603ENSELUG00000006507puf60b10088.689Esox_lucius
ENSSPAG00000012144puf60b10086.629ENSELUG00000018443-10085.294Esox_lucius
ENSSPAG00000012144puf60b10083.925ENSFCAG00000001045PUF6010083.364Felis_catus
ENSSPAG00000012144puf60b10075.327ENSFALG00000001136PUF609874.492Ficedula_albicollis
ENSSPAG00000012144puf60b10084.112ENSFDAG00000017177PUF609382.810Fukomys_damarensis
ENSSPAG00000012144puf60b9680.594ENSFHEG00000021687PUF6010080.040Fundulus_heteroclitus
ENSSPAG00000012144puf60b10095.446ENSFHEG00000020046puf60b10095.446Fundulus_heteroclitus
ENSSPAG00000012144puf60b10080.075ENSGMOG00000006392puf60b10080.669Gadus_morhua
ENSSPAG00000012144puf60b6786.555ENSGALG00000039901PUF609485.714Gallus_gallus
ENSSPAG00000012144puf60b10095.256ENSGAFG00000021040puf60b10095.256Gambusia_affinis
ENSSPAG00000012144puf60b10078.639ENSGAFG00000004334-9977.445Gambusia_affinis
ENSSPAG00000012144puf60b10082.732ENSGACG00000004717puf60b9882.176Gasterosteus_aculeatus
ENSSPAG00000012144puf60b10071.023ENSGACG00000001484-10070.076Gasterosteus_aculeatus
ENSSPAG00000012144puf60b10083.738ENSGAGG00000013289PUF609382.234Gopherus_agassizii
ENSSPAG00000012144puf60b10083.925ENSGGOG00000004646PUF609882.625Gorilla_gorilla
ENSSPAG00000012144puf60b10095.636ENSHBUG00000015118puf60b10095.636Haplochromis_burtoni
ENSSPAG00000012144puf60b10081.629ENSHBUG00000009634-10081.213Haplochromis_burtoni
ENSSPAG00000012144puf60b10084.112ENSHGLG00000006111PUF609382.810Heterocephalus_glaber_female
ENSSPAG00000012144puf60b10084.112ENSHGLG00100012362PUF609382.810Heterocephalus_glaber_male
ENSSPAG00000012144puf60b10096.617ENSHCOG00000015541puf60b10096.442Hippocampus_comes
ENSSPAG00000012144puf60b9866.031ENSHCOG00000000378-9963.904Hippocampus_comes
ENSSPAG00000012144puf60b10079.889ENSIPUG00000004660puf60b9979.143Ictalurus_punctatus
ENSSPAG00000012144puf60b10083.178ENSIPUG00000002453puf60a9983.148Ictalurus_punctatus
ENSSPAG00000012144puf60b10084.299ENSSTOG00000025037PUF609482.994Ictidomys_tridecemlineatus
ENSSPAG00000012144puf60b10084.486ENSJJAG00000001076Puf609383.179Jaculus_jaculus
ENSSPAG00000012144puf60b10095.256ENSKMAG00000016745puf60b10095.256Kryptolebias_marmoratus
ENSSPAG00000012144puf60b10076.822ENSKMAG00000010106-10077.425Kryptolebias_marmoratus
ENSSPAG00000012144puf60b10096.395ENSLBEG00000012505puf60b9996.395Labrus_bergylta
ENSSPAG00000012144puf60b7277.143ENSLACG00000005456PUF6010075.969Latimeria_chalumnae
ENSSPAG00000012144puf60b10087.146ENSLOCG00000010106puf60b10085.978Lepisosteus_oculatus
ENSSPAG00000012144puf60b10083.178ENSLAFG00000022929PUF609482.070Loxodonta_africana
ENSSPAG00000012144puf60b10083.925ENSMFAG00000043373PUF609883.364Macaca_fascicularis
ENSSPAG00000012144puf60b10083.925ENSMMUG00000013558PUF609882.625Macaca_mulatta
ENSSPAG00000012144puf60b10083.925ENSMNEG00000031099PUF609882.625Macaca_nemestrina
ENSSPAG00000012144puf60b10083.925ENSMLEG00000040009PUF6010083.364Mandrillus_leucophaeus
ENSSPAG00000012144puf60b10097.913ENSMAMG00000010394puf60b10097.913Mastacembelus_armatus
ENSSPAG00000012144puf60b10081.664ENSMAMG00000019476-10080.996Mastacembelus_armatus
ENSSPAG00000012144puf60b10081.629ENSMZEG00005019425-10080.407Maylandia_zebra
ENSSPAG00000012144puf60b10095.636ENSMZEG00005018515puf60b10095.636Maylandia_zebra
ENSSPAG00000012144puf60b10084.673ENSMGAG00000013070PUF609983.425Meleagris_gallopavo
ENSSPAG00000012144puf60b6987.166ENSMAUG00000014267-9085.263Mesocricetus_auratus
ENSSPAG00000012144puf60b9667.181ENSMAUG00000018549-9568.327Mesocricetus_auratus
ENSSPAG00000012144puf60b10084.112ENSMICG00000012226PUF609982.873Microcebus_murinus
ENSSPAG00000012144puf60b10084.486ENSMOCG00000018780Puf609383.179Microtus_ochrogaster
ENSSPAG00000012144puf60b10074.763ENSMMOG00000018059-10073.384Mola_mola
ENSSPAG00000012144puf60b10096.395ENSMMOG00000004217puf60b10096.395Mola_mola
ENSSPAG00000012144puf60b10083.925ENSMODG00000009161PUF609482.625Monodelphis_domestica
ENSSPAG00000012144puf60b10080.303ENSMALG00000000200-10079.113Monopterus_albus
ENSSPAG00000012144puf60b10091.271ENSMALG00000006797puf60b10090.741Monopterus_albus
ENSSPAG00000012144puf60b10084.673MGP_CAROLIEiJ_G0019910Puf609383.364Mus_caroli
ENSSPAG00000012144puf60b10084.673ENSMUSG00000002524Puf609383.364Mus_musculus
ENSSPAG00000012144puf60b10084.673MGP_PahariEiJ_G0019920Puf609383.364Mus_pahari
ENSSPAG00000012144puf60b10084.673MGP_SPRETEiJ_G0020812Puf609383.364Mus_spretus
ENSSPAG00000012144puf60b10083.925ENSMPUG00000008137PUF609282.625Mustela_putorius_furo
ENSSPAG00000012144puf60b10083.738ENSMLUG00000000238-9382.440Myotis_lucifugus
ENSSPAG00000012144puf60b9979.580ENSMLUG00000013032-9879.008Myotis_lucifugus
ENSSPAG00000012144puf60b10084.486ENSNGAG00000000712Puf6010083.925Nannospalax_galili
ENSSPAG00000012144puf60b8397.039ENSNBRG00000013047puf60b9696.854Neolamprologus_brichardi
ENSSPAG00000012144puf60b10081.629ENSNBRG00000017223-10080.407Neolamprologus_brichardi
ENSSPAG00000012144puf60b10083.925ENSNLEG00000002156PUF609882.625Nomascus_leucogenys
ENSSPAG00000012144puf60b7094.585ENSOPRG00000002147PUF607294.585Ochotona_princeps
ENSSPAG00000012144puf60b9861.969ENSODEG00000015513-9860.374Octodon_degus
ENSSPAG00000012144puf60b7287.288ENSODEG00000014024-8986.441Octodon_degus
ENSSPAG00000012144puf60b10095.636ENSONIG00000006247puf60b9895.497Oreochromis_niloticus
ENSSPAG00000012144puf60b10081.439ENSONIG00000014030-9980.037Oreochromis_niloticus
ENSSPAG00000012144puf60b9770.428ENSOANG00000006962PUF609870.000Ornithorhynchus_anatinus
ENSSPAG00000012144puf60b10094.877ENSORLG00000012279puf60b10094.877Oryzias_latipes
ENSSPAG00000012144puf60b9980.300ENSORLG00000028655-9978.799Oryzias_latipes
ENSSPAG00000012144puf60b10094.877ENSORLG00020007333puf6010094.877Oryzias_latipes_hni
ENSSPAG00000012144puf60b9980.907ENSORLG00020018144-9978.782Oryzias_latipes_hni
ENSSPAG00000012144puf60b9980.718ENSORLG00015016833-9978.598Oryzias_latipes_hsok
ENSSPAG00000012144puf60b10094.140ENSORLG00015007718puf60b10093.951Oryzias_latipes_hsok
ENSSPAG00000012144puf60b9980.492ENSOMEG00000022185-9978.004Oryzias_melastigma
ENSSPAG00000012144puf60b10096.584ENSOMEG00000001643puf60b10096.296Oryzias_melastigma
ENSSPAG00000012144puf60b10084.299ENSOGAG00000006259PUF609382.994Otolemur_garnettii
ENSSPAG00000012144puf60b10079.511ENSOARG00000016235PUF609879.740Ovis_aries
ENSSPAG00000012144puf60b10083.925ENSPPAG00000029933PUF609981.901Pan_paniscus
ENSSPAG00000012144puf60b10083.925ENSPPRG00000003257PUF6010083.364Panthera_pardus
ENSSPAG00000012144puf60b10081.682ENSPTIG00000009795PUF609980.407Panthera_tigris_altaica
ENSSPAG00000012144puf60b10083.925ENSPTRG00000043963-9882.625Pan_troglodytes
ENSSPAG00000012144puf60b10083.925ENSPTRG00000020670PUF609981.901Pan_troglodytes
ENSSPAG00000012144puf60b10083.925ENSPANG00000021936PUF609882.625Papio_anubis
ENSSPAG00000012144puf60b10088.046ENSPKIG00000012204puf60b10088.235Paramormyrops_kingsleyae
ENSSPAG00000012144puf60b10087.571ENSPKIG00000004295puf60a9987.966Paramormyrops_kingsleyae
ENSSPAG00000012144puf60b10084.112ENSPSIG00000004679PUF609982.810Pelodiscus_sinensis
ENSSPAG00000012144puf60b10093.396ENSPMGG00000013444puf60b10092.818Periophthalmus_magnuspinnatus
ENSSPAG00000012144puf60b10084.486ENSPEMG00000008820Puf609383.179Peromyscus_maniculatus_bairdii
ENSSPAG00000012144puf60b10084.299ENSPCIG00000020270PUF609983.271Phascolarctos_cinereus
ENSSPAG00000012144puf60b10095.446ENSPFOG00000019217puf60b9995.155Poecilia_formosa
ENSSPAG00000012144puf60b10080.151ENSPFOG00000011118-10078.229Poecilia_formosa
ENSSPAG00000012144puf60b10095.446ENSPLAG00000010754puf60b10095.446Poecilia_latipinna
ENSSPAG00000012144puf60b10080.529ENSPLAG00000017025-9278.229Poecilia_latipinna
ENSSPAG00000012144puf60b10095.446ENSPMEG00000000838puf60b10095.446Poecilia_mexicana
ENSSPAG00000012144puf60b10080.340ENSPMEG00000009767-9278.413Poecilia_mexicana
ENSSPAG00000012144puf60b10097.723ENSPREG00000005440puf60b10097.407Poecilia_reticulata
ENSSPAG00000012144puf60b8181.422ENSPPYG00000018951-9580.734Pongo_abelii
ENSSPAG00000012144puf60b8183.028ENSPCAG00000014837PUF6010082.339Procavia_capensis
ENSSPAG00000012144puf60b10083.925ENSPCOG00000027981PUF609982.721Propithecus_coquereli
ENSSPAG00000012144puf60b10096.835ENSPVAG00000016167PUF608196.835Pteropus_vampyrus
ENSSPAG00000012144puf60b10081.629ENSPNYG00000004273-10080.407Pundamilia_nyererei
ENSSPAG00000012144puf60b10095.636ENSPNYG00000002556puf60b10095.636Pundamilia_nyererei
ENSSPAG00000012144puf60b9979.079ENSPNAG00000019415puf60b9176.628Pygocentrus_nattereri
ENSSPAG00000012144puf60b9885.521ENSPNAG00000019909puf60a9985.521Pygocentrus_nattereri
ENSSPAG00000012144puf60b10084.673ENSRNOG00000009960Puf609383.364Rattus_norvegicus
ENSSPAG00000012144puf60b10083.925ENSRBIG00000035274PUF609882.625Rhinopithecus_bieti
ENSSPAG00000012144puf60b10083.925ENSRROG00000029360PUF609982.625Rhinopithecus_roxellana
ENSSPAG00000012144puf60b10082.617ENSSBOG00000027089PUF609980.256Saimiri_boliviensis_boliviensis
ENSSPAG00000012144puf60b9083.437ENSSHAG00000006668PUF609082.004Sarcophilus_harrisii
ENSSPAG00000012144puf60b10081.238ENSSFOG00015019619puf60b9983.202Scleropages_formosus
ENSSPAG00000012144puf60b10084.559ENSSFOG00015019371puf60a10086.438Scleropages_formosus
ENSSPAG00000012144puf60b75100.000ENSSMAG00000016381puf60b78100.000Scophthalmus_maximus
ENSSPAG00000012144puf60b9782.031ENSSDUG00000007048-9781.559Seriola_dumerili
ENSSPAG00000012144puf60b10099.051ENSSDUG00000009935puf60b9999.051Seriola_dumerili
ENSSPAG00000012144puf60b10099.620ENSSLDG00000024011puf60b10099.620Seriola_lalandi_dorsalis
ENSSPAG00000012144puf60b10079.963ENSSLDG00000007366-9979.626Seriola_lalandi_dorsalis
ENSSPAG00000012144puf60b6675.354ENSSPUG00000013518PUF609275.291Sphenodon_punctatus
ENSSPAG00000012144puf60b10083.925ENSSSCG00000038800PUF609882.061Sus_scrofa
ENSSPAG00000012144puf60b10081.903ENSTGUG00000012797-10080.627Taeniopygia_guttata
ENSSPAG00000012144puf60b10097.154ENSTRUG00000005420puf60b10097.154Takifugu_rubripes
ENSSPAG00000012144puf60b9880.039ENSTRUG00000008843-10079.452Takifugu_rubripes
ENSSPAG00000012144puf60b10094.497ENSTNIG00000013675puf60b9993.928Tetraodon_nigroviridis
ENSSPAG00000012144puf60b10078.368ENSTNIG00000003069-9977.799Tetraodon_nigroviridis
ENSSPAG00000012144puf60b5782.295ENSTBEG00000002751-9781.311Tupaia_belangeri
ENSSPAG00000012144puf60b7763.562ENSTBEG00000001899-10062.740Tupaia_belangeri
ENSSPAG00000012144puf60b10082.243ENSTTRG00000017088PUF6010082.430Tursiops_truncatus
ENSSPAG00000012144puf60b10084.112ENSUAMG00000024917PUF609882.810Ursus_americanus
ENSSPAG00000012144puf60b10079.252ENSUMAG00000000272PUF609378.189Ursus_maritimus
ENSSPAG00000012144puf60b10084.112ENSVVUG00000022527PUF6010083.551Vulpes_vulpes
ENSSPAG00000012144puf60b10082.056ENSXETG00000012469puf609980.806Xenopus_tropicalis
ENSSPAG00000012144puf60b9895.294ENSXCOG00000012355puf60b10095.294Xiphophorus_couchianus
ENSSPAG00000012144puf60b10095.446ENSXMAG00000001862puf60b10095.446Xiphophorus_maculatus
ENSSPAG00000012144puf60b9979.344ENSXMAG00000010507-9977.799Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us