EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000012349 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 18684 bases
Position: chrKK580099.1:286090-304773
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000016378	AF-4	PF05110.13	3.7e-116	1	1
ENSSPAP00000016384	AF-4	PF05110.13	4e-116	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000016639	-	1701	-	ENSSPAP00000016378	360 (aa)	-	-
ENSSPAT00000016645	-	1410	-	ENSSPAP00000016384	367 (aa)	-	-

Gene Model

Click here to download ENSSPAG00000012349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000012349's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000012349	-	51	61.538	ENSG00000144218	AFF3	64	61.538	Homo_sapiens
ENSSPAG00000012349	-	98	66.391	ENSG00000072364	AFF4	89	68.841	Homo_sapiens
ENSSPAG00000012349	-	99	94.678	ENSACIG00000010592	-	100	94.678	Amphilophus_citrinellus
ENSSPAG00000012349	-	98	64.543	ENSCPOG00000001814	AFF4	99	64.286	Cavia_porcellus
ENSSPAG00000012349	-	96	38.781	ENSCPOG00000006346	AFF3	62	61.538	Cavia_porcellus
ENSSPAG00000012349	-	98	66.301	ENSCCAG00000030353	AFF4	97	66.022	Cebus_capucinus
ENSSPAG00000012349	-	98	65.833	ENSCPBG00000016549	-	99	65.556	Chrysemys_picta_bellii
ENSSPAG00000012349	-	51	58.462	ENSCGRG00000003408	Aff3	62	58.462	Cricetulus_griseus_crigri
ENSSPAG00000012349	-	73	36.296	ENSFALG00000003872	-	52	63.077	Ficedula_albicollis
ENSSPAG00000012349	-	97	66.667	ENSSTOG00000026695	AFF4	100	67.442	Ictidomys_tridecemlineatus
ENSSPAG00000012349	-	51	64.615	ENSJJAG00000013155	Aff3	62	64.615	Jaculus_jaculus
ENSSPAG00000012349	-	94	59.078	ENSMICG00000030374	-	96	58.092	Microcebus_murinus
ENSSPAG00000012349	-	98	66.480	MGP_CAROLIEiJ_G0016331	Aff4	100	67.442	Mus_caroli
ENSSPAG00000012349	-	98	66.480	ENSMUSG00000049470	Aff4	100	67.442	Mus_musculus
ENSSPAG00000012349	-	98	67.039	MGP_PahariEiJ_G0017466	Aff4	100	67.442	Mus_pahari
ENSSPAG00000012349	-	98	66.480	MGP_SPRETEiJ_G0017175	Aff4	100	67.442	Mus_spretus
ENSSPAG00000012349	-	96	36.412	ENSNGAG00000002408	Aff3	53	63.077	Nannospalax_galili
ENSSPAG00000012349	-	98	93.162	ENSNBRG00000006285	-	97	93.162	Neolamprologus_brichardi
ENSSPAG00000012349	-	98	79.666	ENSPMGG00000006483	-	98	79.109	Periophthalmus_magnuspinnatus
ENSSPAG00000012349	-	51	58.462	ENSPEMG00000014802	Aff3	62	58.462	Peromyscus_maniculatus_bairdii
ENSSPAG00000012349	-	98	66.027	ENSSBOG00000021562	AFF4	99	64.690	Saimiri_boliviensis_boliviensis
ENSSPAG00000012349	-	97	67.751	ENSSFOG00015000839	-	89	65.574	Scleropages_formosus
ENSSPAG00000012349	-	96	33.596	ENSSDUG00000013932	-	88	32.540	Seriola_dumerili
ENSSPAG00000012349	-	98	33.592	ENSSLDG00000022289	-	88	32.552	Seriola_lalandi_dorsalis
ENSSPAG00000012349	-	99	85.794	ENSXCOG00000006382	-	100	85.794	Xiphophorus_couchianus