EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000012533 (Gene tree)
Gene ID: 103353879
Gene Symbol: -
Alias: -
Full Name: transcription activator BRG1-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 22155 bases
Position: chrKK580074.1:1146363-1168517
Accession: 103353879
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000016761	ResIII	PF04851.15	1.4e-08	1	1
ENSSPAP00000016686	ResIII	PF04851.15	1.6e-08	1	1
ENSSPAP00000016761	BRK	PF07533.16	5.3e-16	1	1
ENSSPAP00000016686	BRK	PF07533.16	5.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000017023	-	4656	-	ENSSPAP00000016761	1551 (aa)	-	-
ENSSPAT00000016949	-	7836	XM_008277059	ENSSPAP00000016686	1682 (aa)	XP_008275281	UPI000495A86D

Gene Model

Click here to download ENSSPAG00000012533's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000012533's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000012533	-	97	84.211	ENSSPAG00000004248	smarca4a	100	83.817
ENSSPAG00000012533	-	97	71.276	ENSSPAG00000020091	-	95	70.904

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000012533	-	99	83.245	ENSG00000127616	SMARCA4	99	95.833	Homo_sapiens
ENSSPAG00000012533	-	74	88.019	ENSAPOG00000003509	smarca4a	98	86.476	Acanthochromis_polyacanthus
ENSSPAG00000012533	-	97	98.155	ENSAPOG00000004542	SMARCA4	99	98.485	Acanthochromis_polyacanthus
ENSSPAG00000012533	-	99	80.690	ENSAMEG00000010868	SMARCA4	100	80.966	Ailuropoda_melanoleuca
ENSSPAG00000012533	-	94	97.461	ENSACIG00000003035	-	96	97.186	Amphilophus_citrinellus
ENSSPAG00000012533	-	99	82.109	ENSACIG00000021550	smarca4a	98	84.315	Amphilophus_citrinellus
ENSSPAG00000012533	-	89	87.411	ENSAOCG00000019167	smarca4a	100	87.420	Amphiprion_ocellaris
ENSSPAG00000012533	-	94	95.675	ENSAOCG00000009450	-	97	95.476	Amphiprion_ocellaris
ENSSPAG00000012533	-	89	87.482	ENSAPEG00000015559	smarca4a	100	87.491	Amphiprion_percula
ENSSPAG00000012533	-	100	98.219	ENSAPEG00000023108	-	100	98.219	Amphiprion_percula
ENSSPAG00000012533	-	99	95.579	ENSATEG00000001094	-	98	95.579	Anabas_testudineus
ENSSPAG00000012533	-	99	83.983	ENSATEG00000011524	smarca4a	100	84.086	Anabas_testudineus
ENSSPAG00000012533	-	99	83.234	ENSANAG00000036991	SMARCA4	100	81.160	Aotus_nancymaae
ENSSPAG00000012533	-	97	96.800	ENSACLG00000008638	-	99	96.800	Astatotilapia_calliptera
ENSSPAG00000012533	-	99	83.524	ENSACLG00000000163	smarca4a	98	83.885	Astatotilapia_calliptera
ENSSPAG00000012533	-	96	84.510	ENSAMXG00000021023	smarca4a	99	83.638	Astyanax_mexicanus
ENSSPAG00000012533	-	94	88.058	ENSAMXG00000011238	-	96	90.672	Astyanax_mexicanus
ENSSPAG00000012533	-	99	83.511	ENSBTAG00000019220	SMARCA4	99	87.328	Bos_taurus
ENSSPAG00000012533	-	97	86.135	ENSCJAG00000005936	SMARCA4	95	86.749	Callithrix_jacchus
ENSSPAG00000012533	-	99	82.998	ENSCAFG00000017584	SMARCA4	100	83.640	Canis_familiaris
ENSSPAG00000012533	-	99	82.998	ENSCAFG00020024620	SMARCA4	99	83.640	Canis_lupus_dingo
ENSSPAG00000012533	-	99	80.036	ENSCHIG00000015318	SMARCA4	100	80.036	Capra_hircus
ENSSPAG00000012533	-	99	83.630	ENSTSYG00000012966	SMARCA4	100	83.096	Carlito_syrichta
ENSSPAG00000012533	-	94	83.583	ENSCAPG00000015932	SMARCA4	94	88.965	Cavia_aperea
ENSSPAG00000012533	-	99	83.393	ENSCPOG00000015549	SMARCA4	100	83.580	Cavia_porcellus
ENSSPAG00000012533	-	99	80.259	ENSCCAG00000031660	SMARCA4	99	81.003	Cebus_capucinus
ENSSPAG00000012533	-	99	83.245	ENSCATG00000029530	SMARCA4	100	83.699	Cercocebus_atys
ENSSPAG00000012533	-	99	83.689	ENSCLAG00000011946	SMARCA4	100	83.274	Chinchilla_lanigera
ENSSPAG00000012533	-	99	82.959	ENSCPBG00000009994	SMARCA4	100	83.028	Chrysemys_picta_bellii
ENSSPAG00000012533	-	99	83.185	ENSCANG00000036013	SMARCA4	100	83.699	Colobus_angolensis_palliatus
ENSSPAG00000012533	-	99	82.948	ENSCGRG00001016732	Smarca4	100	83.284	Cricetulus_griseus_chok1gshd
ENSSPAG00000012533	-	99	82.948	ENSCGRG00000017242	Smarca4	100	83.284	Cricetulus_griseus_crigri
ENSSPAG00000012533	-	96	82.502	ENSCSEG00000014771	smarca4a	100	83.106	Cynoglossus_semilaevis
ENSSPAG00000012533	-	98	93.654	ENSCVAG00000003018	-	99	93.590	Cyprinodon_variegatus
ENSSPAG00000012533	-	97	81.728	ENSCVAG00000006979	smarca4a	99	83.524	Cyprinodon_variegatus
ENSSPAG00000012533	-	98	84.498	ENSDARG00000077226	smarca4a	99	88.940	Danio_rerio
ENSSPAG00000012533	-	92	83.457	ENSDARG00000104339	SMARCA4	94	83.054	Danio_rerio
ENSSPAG00000012533	-	96	83.333	ENSDNOG00000048847	SMARCA4	91	88.781	Dasypus_novemcinctus
ENSSPAG00000012533	-	86	78.207	ENSDORG00000002544	Smarca4	91	79.529	Dipodomys_ordii
ENSSPAG00000012533	-	94	73.412	ENSETEG00000013361	SMARCA4	94	73.615	Echinops_telfairi
ENSSPAG00000012533	-	96	86.726	ENSEASG00005006167	SMARCA4	100	81.359	Equus_asinus_asinus
ENSSPAG00000012533	-	99	83.143	ENSECAG00000008334	SMARCA4	99	86.894	Equus_caballus
ENSSPAG00000012533	-	97	82.342	ENSELUG00000023232	-	98	83.496	Esox_lucius
ENSSPAG00000012533	-	99	82.999	ENSELUG00000010247	smarca4a	100	82.238	Esox_lucius
ENSSPAG00000012533	-	99	82.969	ENSFCAG00000004894	SMARCA4	100	83.550	Felis_catus
ENSSPAG00000012533	-	84	89.884	ENSFALG00000004208	SMARCA4	95	80.747	Ficedula_albicollis
ENSSPAG00000012533	-	92	83.645	ENSFDAG00000012237	SMARCA4	97	84.413	Fukomys_damarensis
ENSSPAG00000012533	-	95	82.171	ENSFHEG00000010182	smarca4a	100	82.655	Fundulus_heteroclitus
ENSSPAG00000012533	-	100	95.600	ENSFHEG00000007902	-	100	95.600	Fundulus_heteroclitus
ENSSPAG00000012533	-	85	83.017	ENSGMOG00000002649	smarca4a	94	80.655	Gadus_morhua
ENSSPAG00000012533	-	93	84.846	ENSGMOG00000005756	-	90	84.062	Gadus_morhua
ENSSPAG00000012533	-	73	80.676	ENSGALG00000047145	SMARCA4	100	82.134	Gallus_gallus
ENSSPAG00000012533	-	98	88.846	ENSGAFG00000008827	-	99	88.535	Gambusia_affinis
ENSSPAG00000012533	-	87	87.483	ENSGAFG00000014900	smarca4a	98	87.356	Gambusia_affinis
ENSSPAG00000012533	-	99	86.744	ENSGACG00000016033	-	100	85.814	Gasterosteus_aculeatus
ENSSPAG00000012533	-	95	82.382	ENSGACG00000006691	smarca4a	100	82.018	Gasterosteus_aculeatus
ENSSPAG00000012533	-	99	83.165	ENSGAGG00000016757	SMARCA4	100	83.235	Gopherus_agassizii
ENSSPAG00000012533	-	99	83.245	ENSGGOG00000009882	SMARCA4	100	83.699	Gorilla_gorilla
ENSSPAG00000012533	-	100	96.254	ENSHBUG00000005447	-	100	96.254	Haplochromis_burtoni
ENSSPAG00000012533	-	99	83.904	ENSHBUG00000021172	smarca4a	100	84.401	Haplochromis_burtoni
ENSSPAG00000012533	-	99	82.842	ENSHGLG00000010519	SMARCA4	100	83.058	Heterocephalus_glaber_female
ENSSPAG00000012533	-	99	83.028	ENSHGLG00100013774	SMARCA4	100	82.468	Heterocephalus_glaber_male
ENSSPAG00000012533	-	95	84.095	ENSHCOG00000009510	smarca4a	96	84.519	Hippocampus_comes
ENSSPAG00000012533	-	98	85.048	ENSIPUG00000016346	-	97	84.752	Ictalurus_punctatus
ENSSPAG00000012533	-	99	84.847	ENSIPUG00000006107	smarca4a	100	84.086	Ictalurus_punctatus
ENSSPAG00000012533	-	99	82.998	ENSSTOG00000007939	SMARCA4	100	83.284	Ictidomys_tridecemlineatus
ENSSPAG00000012533	-	99	82.312	ENSJJAG00000012877	Smarca4	100	82.680	Jaculus_jaculus
ENSSPAG00000012533	-	100	95.544	ENSKMAG00000019518	-	100	95.544	Kryptolebias_marmoratus
ENSSPAG00000012533	-	99	82.441	ENSKMAG00000011931	smarca4a	100	83.155	Kryptolebias_marmoratus
ENSSPAG00000012533	-	94	91.209	ENSLBEG00000020655	-	100	89.144	Labrus_bergylta
ENSSPAG00000012533	-	95	83.475	ENSLBEG00000017383	smarca4a	98	82.241	Labrus_bergylta
ENSSPAG00000012533	-	53	76.339	ENSLACG00000015309	SMARCA4	100	76.960	Latimeria_chalumnae
ENSSPAG00000012533	-	99	80.203	ENSLOCG00000007820	smarca4a	99	80.831	Lepisosteus_oculatus
ENSSPAG00000012533	-	99	83.038	ENSLAFG00000001433	SMARCA4	100	83.432	Loxodonta_africana
ENSSPAG00000012533	-	99	83.245	ENSMFAG00000032146	SMARCA4	99	83.699	Macaca_fascicularis
ENSSPAG00000012533	-	99	83.453	ENSMMUG00000012042	SMARCA4	99	88.952	Macaca_mulatta
ENSSPAG00000012533	-	99	83.462	ENSMNEG00000028512	SMARCA4	100	83.363	Macaca_nemestrina
ENSSPAG00000012533	-	99	83.304	ENSMLEG00000034976	SMARCA4	100	83.491	Mandrillus_leucophaeus
ENSSPAG00000012533	-	96	86.787	ENSMAMG00000009256	smarca4a	98	88.494	Mastacembelus_armatus
ENSSPAG00000012533	-	100	97.206	ENSMAMG00000002841	-	100	97.206	Mastacembelus_armatus
ENSSPAG00000012533	-	97	96.246	ENSMZEG00005023861	-	99	96.246	Maylandia_zebra
ENSSPAG00000012533	-	99	83.774	ENSMZEG00005003889	smarca4a	100	84.273	Maylandia_zebra
ENSSPAG00000012533	-	99	82.920	ENSMAUG00000020731	Smarca4	99	84.312	Mesocricetus_auratus
ENSSPAG00000012533	-	99	83.038	ENSMICG00000009806	SMARCA4	100	83.491	Microcebus_murinus
ENSSPAG00000012533	-	99	82.565	ENSMOCG00000022209	Smarca4	100	83.018	Microtus_ochrogaster
ENSSPAG00000012533	-	97	90.791	ENSMMOG00000008466	-	98	90.306	Mola_mola
ENSSPAG00000012533	-	95	82.387	ENSMMOG00000007571	smarca4a	98	82.709	Mola_mola
ENSSPAG00000012533	-	99	82.855	ENSMODG00000006287	SMARCA4	99	85.075	Monodelphis_domestica
ENSSPAG00000012533	-	89	94.975	ENSMALG00000021534	-	99	94.975	Monopterus_albus
ENSSPAG00000012533	-	95	83.147	ENSMALG00000003388	smarca4a	100	83.848	Monopterus_albus
ENSSPAG00000012533	-	99	82.830	MGP_CAROLIEiJ_G0031879	Smarca4	100	86.535	Mus_caroli
ENSSPAG00000012533	-	99	82.830	ENSMUSG00000032187	Smarca4	99	86.535	Mus_musculus
ENSSPAG00000012533	-	99	82.918	MGP_PahariEiJ_G0014745	Smarca4	100	86.006	Mus_pahari
ENSSPAG00000012533	-	99	82.830	MGP_SPRETEiJ_G0033003	Smarca4	100	86.535	Mus_spretus
ENSSPAG00000012533	-	99	82.998	ENSMPUG00000005711	SMARCA4	100	83.580	Mustela_putorius_furo
ENSSPAG00000012533	-	99	83.521	ENSMLUG00000004491	-	100	83.640	Myotis_lucifugus
ENSSPAG00000012533	-	99	82.454	ENSNGAG00000021852	Smarca4	100	83.037	Nannospalax_galili
ENSSPAG00000012533	-	95	86.573	ENSNBRG00000011457	smarca4a	96	86.276	Neolamprologus_brichardi
ENSSPAG00000012533	-	89	96.987	ENSNBRG00000018865	-	99	96.987	Neolamprologus_brichardi
ENSSPAG00000012533	-	95	80.211	ENSNLEG00000012389	SMARCA4	95	80.377	Nomascus_leucogenys
ENSSPAG00000012533	-	82	93.103	ENSOPRG00000000885	-	76	93.103	Ochotona_princeps
ENSSPAG00000012533	-	99	82.200	ENSODEG00000017127	SMARCA4	99	82.617	Octodon_degus
ENSSPAG00000012533	-	99	84.005	ENSONIG00000008196	smarca4a	100	84.382	Oreochromis_niloticus
ENSSPAG00000012533	-	99	96.371	ENSONIG00000018040	-	100	96.371	Oreochromis_niloticus
ENSSPAG00000012533	-	98	78.485	ENSOCUG00000001787	SMARCA4	98	78.161	Oryctolagus_cuniculus
ENSSPAG00000012533	-	97	93.562	ENSORLG00000003955	-	100	93.120	Oryzias_latipes
ENSSPAG00000012533	-	97	80.984	ENSORLG00000015452	smarca4a	100	83.096	Oryzias_latipes
ENSSPAG00000012533	-	97	93.566	ENSORLG00020009728	-	100	93.124	Oryzias_latipes_hni
ENSSPAG00000012533	-	97	80.923	ENSORLG00020004611	smarca4a	99	85.827	Oryzias_latipes_hni
ENSSPAG00000012533	-	100	93.060	ENSORLG00015007739	-	100	92.883	Oryzias_latipes_hsok
ENSSPAG00000012533	-	97	80.984	ENSORLG00015016560	smarca4a	100	83.155	Oryzias_latipes_hsok
ENSSPAG00000012533	-	97	94.049	ENSOMEG00000016626	-	100	93.709	Oryzias_melastigma
ENSSPAG00000012533	-	97	82.294	ENSOMEG00000007486	smarca4a	100	83.789	Oryzias_melastigma
ENSSPAG00000012533	-	90	82.268	ENSOGAG00000016148	SMARCA4	100	83.011	Otolemur_garnettii
ENSSPAG00000012533	-	99	82.859	ENSOARG00000017454	SMARCA4	97	83.036	Ovis_aries
ENSSPAG00000012533	-	99	83.245	ENSPPAG00000043191	SMARCA4	100	83.699	Pan_paniscus
ENSSPAG00000012533	-	99	82.969	ENSPPRG00000000064	SMARCA4	100	83.550	Panthera_pardus
ENSSPAG00000012533	-	93	85.500	ENSPTIG00000017447	SMARCA4	100	78.738	Panthera_tigris_altaica
ENSSPAG00000012533	-	99	83.245	ENSPTRG00000010488	SMARCA4	100	83.699	Pan_troglodytes
ENSSPAG00000012533	-	99	83.580	ENSPANG00000011042	SMARCA4	99	83.481	Papio_anubis
ENSSPAG00000012533	-	99	86.607	ENSPKIG00000007770	SMARCA4	99	85.341	Paramormyrops_kingsleyae
ENSSPAG00000012533	-	95	85.393	ENSPKIG00000010087	-	96	84.361	Paramormyrops_kingsleyae
ENSSPAG00000012533	-	99	78.380	ENSPSIG00000005547	SMARCA4	100	78.776	Pelodiscus_sinensis
ENSSPAG00000012533	-	99	82.742	ENSPEMG00000020389	Smarca4	100	83.077	Peromyscus_maniculatus_bairdii
ENSSPAG00000012533	-	99	83.649	ENSPCIG00000017138	SMARCA4	99	87.844	Phascolarctos_cinereus
ENSSPAG00000012533	-	99	82.339	ENSPFOG00000007892	smarca4a	99	87.060	Poecilia_formosa
ENSSPAG00000012533	-	100	94.831	ENSPFOG00000012930	-	100	94.712	Poecilia_formosa
ENSSPAG00000012533	-	98	91.370	ENSPLAG00000018616	-	98	91.516	Poecilia_latipinna
ENSSPAG00000012533	-	99	82.457	ENSPLAG00000014294	smarca4a	99	87.213	Poecilia_latipinna
ENSSPAG00000012533	-	95	83.251	ENSPMEG00000003725	smarca4a	96	83.727	Poecilia_mexicana
ENSSPAG00000012533	-	98	91.443	ENSPMEG00000008929	-	99	92.524	Poecilia_mexicana
ENSSPAG00000012533	-	95	95.184	ENSPREG00000014823	-	96	94.934	Poecilia_reticulata
ENSSPAG00000012533	-	96	86.576	ENSPREG00000014608	smarca4a	100	82.488	Poecilia_reticulata
ENSSPAG00000012533	-	99	82.738	ENSPPYG00000009568	SMARCA4	100	82.797	Pongo_abelii
ENSSPAG00000012533	-	79	83.444	ENSPCAG00000014054	SMARCA4	77	83.444	Procavia_capensis
ENSSPAG00000012533	-	99	83.067	ENSPCOG00000023011	SMARCA4	100	83.314	Propithecus_coquereli
ENSSPAG00000012533	-	96	74.873	ENSPVAG00000007787	SMARCA4	96	75.382	Pteropus_vampyrus
ENSSPAG00000012533	-	94	97.392	ENSPNYG00000023995	-	96	97.117	Pundamilia_nyererei
ENSSPAG00000012533	-	97	85.087	ENSPNYG00000000717	smarca4a	96	84.769	Pundamilia_nyererei
ENSSPAG00000012533	-	93	89.449	ENSPNAG00000024136	smarca4a	98	83.184	Pygocentrus_nattereri
ENSSPAG00000012533	-	95	87.181	ENSPNAG00000006636	-	94	85.666	Pygocentrus_nattereri
ENSSPAG00000012533	-	99	82.830	ENSRNOG00000009271	Smarca4	100	83.165	Rattus_norvegicus
ENSSPAG00000012533	-	99	83.126	ENSRBIG00000038696	SMARCA4	99	83.580	Rhinopithecus_bieti
ENSSPAG00000012533	-	99	83.185	ENSRROG00000045509	SMARCA4	100	83.640	Rhinopithecus_roxellana
ENSSPAG00000012533	-	99	83.393	ENSSBOG00000026896	SMARCA4	99	83.914	Saimiri_boliviensis_boliviensis
ENSSPAG00000012533	-	99	83.294	ENSSHAG00000001642	SMARCA4	99	87.691	Sarcophilus_harrisii
ENSSPAG00000012533	-	99	85.234	ENSSFOG00015013823	smarca4	99	84.419	Scleropages_formosus
ENSSPAG00000012533	-	95	82.528	ENSSFOG00015009921	-	92	89.978	Scleropages_formosus
ENSSPAG00000012533	-	99	83.243	ENSSMAG00000003200	smarca4a	100	83.106	Scophthalmus_maximus
ENSSPAG00000012533	-	100	94.474	ENSSMAG00000014082	-	100	94.474	Scophthalmus_maximus
ENSSPAG00000012533	-	99	79.426	ENSSDUG00000017298	smarca4a	100	79.622	Seriola_dumerili
ENSSPAG00000012533	-	97	97.850	ENSSDUG00000005388	-	100	97.850	Seriola_dumerili
ENSSPAG00000012533	-	95	93.783	ENSSLDG00000023663	-	99	94.034	Seriola_lalandi_dorsalis
ENSSPAG00000012533	-	99	82.377	ENSSLDG00000024486	smarca4a	100	87.181	Seriola_lalandi_dorsalis
ENSSPAG00000012533	-	62	97.516	ENSSARG00000013477	SMARCA4	82	97.516	Sorex_araneus
ENSSPAG00000012533	-	95	81.130	ENSSPUG00000004558	SMARCA4	98	80.784	Sphenodon_punctatus
ENSSPAG00000012533	-	99	83.156	ENSSSCG00000013629	SMARCA4	100	83.609	Sus_scrofa
ENSSPAG00000012533	-	54	84.770	ENSTGUG00000015488	-	99	84.000	Taeniopygia_guttata
ENSSPAG00000012533	-	97	91.882	ENSTRUG00000001378	SMARCA4	99	91.882	Takifugu_rubripes
ENSSPAG00000012533	-	89	82.415	ENSTRUG00000004885	smarca4a	100	83.170	Takifugu_rubripes
ENSSPAG00000012533	-	72	84.397	ENSTNIG00000004859	-	100	84.397	Tetraodon_nigroviridis
ENSSPAG00000012533	-	99	89.804	ENSTNIG00000004536	SMARCA4	100	89.212	Tetraodon_nigroviridis
ENSSPAG00000012533	-	51	98.649	ENSTBEG00000000707	-	52	98.571	Tupaia_belangeri
ENSSPAG00000012533	-	99	81.382	ENSTTRG00000009519	SMARCA4	100	81.122	Tursiops_truncatus
ENSSPAG00000012533	-	99	83.057	ENSUAMG00000014661	SMARCA4	100	83.640	Ursus_americanus
ENSSPAG00000012533	-	94	89.885	ENSUMAG00000022005	SMARCA4	98	89.676	Ursus_maritimus
ENSSPAG00000012533	-	99	82.998	ENSVVUG00000017820	SMARCA4	97	83.640	Vulpes_vulpes
ENSSPAG00000012533	-	97	80.724	ENSXETG00000009355	smarca4	99	81.009	Xenopus_tropicalis
ENSSPAG00000012533	-	98	91.902	ENSXCOG00000013494	-	99	91.645	Xiphophorus_couchianus
ENSSPAG00000012533	-	96	86.425	ENSXMAG00000006321	smarca4a	99	86.973	Xiphophorus_maculatus
ENSSPAG00000012533	-	100	95.006	ENSXMAG00000007030	-	100	95.006	Xiphophorus_maculatus