EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000012708 (Gene tree)
Gene ID: 103362388
Gene Symbol: rpusd1
Alias: fe26f08|wu:fe26f08|zgc:153465
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 4168 bases
Position: chrKK580643.1:82501-86668
Accession: 103362388
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000016839	PseudoU_synth_2	PF00849.22	3.7e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000017102	-	1752	XM_008288720	ENSSPAP00000016839	310 (aa)	XP_008286942	UPI0004984975

Gene Model

Click here to download ENSSPAG00000012708's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000012708's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000012708	rpusd1	98	56.393	ENSG00000007376	RPUSD1	99	67.066	Homo_sapiens
ENSSPAG00000012708	rpusd1	100	89.355	ENSAPOG00000022221	rpusd1	100	89.032	Acanthochromis_polyacanthus
ENSSPAG00000012708	rpusd1	98	58.689	ENSAMEG00000007461	RPUSD1	98	58.689	Ailuropoda_melanoleuca
ENSSPAG00000012708	rpusd1	99	86.129	ENSACIG00000015863	rpusd1	100	86.129	Amphilophus_citrinellus
ENSSPAG00000012708	rpusd1	100	91.290	ENSAOCG00000021975	rpusd1	97	91.290	Amphiprion_ocellaris
ENSSPAG00000012708	rpusd1	100	91.613	ENSAPEG00000001316	rpusd1	97	91.613	Amphiprion_percula
ENSSPAG00000012708	rpusd1	100	88.065	ENSATEG00000002984	rpusd1	100	88.065	Anabas_testudineus
ENSSPAG00000012708	rpusd1	77	60.166	ENSAPLG00000012316	RPUSD1	98	58.921	Anas_platyrhynchos
ENSSPAG00000012708	rpusd1	98	64.474	ENSACAG00000008953	RPUSD1	99	64.474	Anolis_carolinensis
ENSSPAG00000012708	rpusd1	98	57.049	ENSANAG00000024709	RPUSD1	98	57.049	Aotus_nancymaae
ENSSPAG00000012708	rpusd1	99	87.138	ENSACLG00000013692	rpusd1	100	87.138	Astatotilapia_calliptera
ENSSPAG00000012708	rpusd1	99	69.608	ENSAMXG00000019802	rpusd1	99	68.078	Astyanax_mexicanus
ENSSPAG00000012708	rpusd1	98	60.328	ENSBTAG00000000179	RPUSD1	98	60.000	Bos_taurus
ENSSPAG00000012708	rpusd1	98	56.721	ENSCJAG00000012253	RPUSD1	98	56.721	Callithrix_jacchus
ENSSPAG00000012708	rpusd1	98	58.361	ENSCAFG00000019614	RPUSD1	98	58.033	Canis_familiaris
ENSSPAG00000012708	rpusd1	98	58.361	ENSCAFG00020008891	RPUSD1	98	58.033	Canis_lupus_dingo
ENSSPAG00000012708	rpusd1	98	60.984	ENSCHIG00000012872	RPUSD1	98	60.656	Capra_hircus
ENSSPAG00000012708	rpusd1	98	57.049	ENSTSYG00000036934	RPUSD1	98	56.721	Carlito_syrichta
ENSSPAG00000012708	rpusd1	98	57.705	ENSCAPG00000014219	RPUSD1	98	57.705	Cavia_aperea
ENSSPAG00000012708	rpusd1	98	57.705	ENSCPOG00000034604	RPUSD1	98	57.705	Cavia_porcellus
ENSSPAG00000012708	rpusd1	98	56.721	ENSCCAG00000034385	RPUSD1	98	56.721	Cebus_capucinus
ENSSPAG00000012708	rpusd1	98	57.049	ENSCATG00000042983	RPUSD1	98	57.049	Cercocebus_atys
ENSSPAG00000012708	rpusd1	98	57.377	ENSCLAG00000013966	RPUSD1	83	65.217	Chinchilla_lanigera
ENSSPAG00000012708	rpusd1	98	56.721	ENSCSAG00000012121	RPUSD1	98	56.721	Chlorocebus_sabaeus
ENSSPAG00000012708	rpusd1	98	62.092	ENSCPBG00000021101	RPUSD1	99	62.092	Chrysemys_picta_bellii
ENSSPAG00000012708	rpusd1	81	64.822	ENSCANG00000028576	RPUSD1	90	64.822	Colobus_angolensis_palliatus
ENSSPAG00000012708	rpusd1	98	58.170	ENSCGRG00001014253	Rpusd1	98	58.170	Cricetulus_griseus_chok1gshd
ENSSPAG00000012708	rpusd1	98	58.170	ENSCGRG00000017995	Rpusd1	98	58.170	Cricetulus_griseus_crigri
ENSSPAG00000012708	rpusd1	98	83.224	ENSCSEG00000018512	rpusd1	98	83.224	Cynoglossus_semilaevis
ENSSPAG00000012708	rpusd1	99	84.466	ENSCVAG00000022746	rpusd1	100	84.466	Cyprinodon_variegatus
ENSSPAG00000012708	rpusd1	98	72.697	ENSDARG00000060192	rpusd1	99	71.569	Danio_rerio
ENSSPAG00000012708	rpusd1	98	57.049	ENSDNOG00000003721	RPUSD1	98	57.377	Dasypus_novemcinctus
ENSSPAG00000012708	rpusd1	98	57.705	ENSDORG00000026656	Rpusd1	98	57.705	Dipodomys_ordii
ENSSPAG00000012708	rpusd1	96	47.604	ENSEBUG00000008767	rpusd1	92	46.645	Eptatretus_burgeri
ENSSPAG00000012708	rpusd1	98	58.252	ENSEASG00005018421	RPUSD1	74	58.252	Equus_asinus_asinus
ENSSPAG00000012708	rpusd1	99	72.549	ENSELUG00000014307	rpusd1	89	74.183	Esox_lucius
ENSSPAG00000012708	rpusd1	98	58.033	ENSFCAG00000010359	RPUSD1	98	57.705	Felis_catus
ENSSPAG00000012708	rpusd1	98	64.803	ENSFALG00000003211	RPUSD1	99	63.816	Ficedula_albicollis
ENSSPAG00000012708	rpusd1	98	58.361	ENSFDAG00000013398	RPUSD1	98	57.705	Fukomys_damarensis
ENSSPAG00000012708	rpusd1	99	82.201	ENSFHEG00000004736	rpusd1	100	82.848	Fundulus_heteroclitus
ENSSPAG00000012708	rpusd1	99	74.026	ENSGMOG00000010756	rpusd1	99	72.930	Gadus_morhua
ENSSPAG00000012708	rpusd1	98	64.474	ENSGALG00000005315	RPUSD1	99	64.474	Gallus_gallus
ENSSPAG00000012708	rpusd1	99	83.819	ENSGAFG00000009886	rpusd1	100	83.819	Gambusia_affinis
ENSSPAG00000012708	rpusd1	99	87.379	ENSGACG00000014276	rpusd1	100	87.379	Gasterosteus_aculeatus
ENSSPAG00000012708	rpusd1	98	61.438	ENSGAGG00000004181	RPUSD1	99	61.513	Gopherus_agassizii
ENSSPAG00000012708	rpusd1	98	57.190	ENSGGOG00000013997	RPUSD1	98	57.190	Gorilla_gorilla
ENSSPAG00000012708	rpusd1	99	87.460	ENSHBUG00000023728	rpusd1	100	87.460	Haplochromis_burtoni
ENSSPAG00000012708	rpusd1	98	57.049	ENSHGLG00000002595	RPUSD1	98	56.721	Heterocephalus_glaber_female
ENSSPAG00000012708	rpusd1	98	57.049	ENSHGLG00100014303	RPUSD1	98	56.721	Heterocephalus_glaber_male
ENSSPAG00000012708	rpusd1	99	78.105	ENSHCOG00000002390	rpusd1	99	78.105	Hippocampus_comes
ENSSPAG00000012708	rpusd1	98	67.327	ENSIPUG00000001570	rpusd1	98	66.007	Ictalurus_punctatus
ENSSPAG00000012708	rpusd1	98	58.361	ENSSTOG00000004276	RPUSD1	98	58.033	Ictidomys_tridecemlineatus
ENSSPAG00000012708	rpusd1	98	58.689	ENSJJAG00000015696	Rpusd1	98	58.689	Jaculus_jaculus
ENSSPAG00000012708	rpusd1	100	81.935	ENSKMAG00000017287	rpusd1	100	81.935	Kryptolebias_marmoratus
ENSSPAG00000012708	rpusd1	100	84.194	ENSLBEG00000013354	RPUSD1	100	84.194	Labrus_bergylta
ENSSPAG00000012708	rpusd1	100	84.194	ENSLBEG00000022502	rpusd1	100	84.194	Labrus_bergylta
ENSSPAG00000012708	rpusd1	98	62.171	ENSLACG00000008869	RPUSD1	99	61.842	Latimeria_chalumnae
ENSSPAG00000012708	rpusd1	69	82.243	ENSLOCG00000005682	rpusd1	99	82.243	Lepisosteus_oculatus
ENSSPAG00000012708	rpusd1	98	56.066	ENSLAFG00000002115	RPUSD1	98	56.066	Loxodonta_africana
ENSSPAG00000012708	rpusd1	98	57.049	ENSMFAG00000003961	RPUSD1	98	57.049	Macaca_fascicularis
ENSSPAG00000012708	rpusd1	98	57.049	ENSMMUG00000000842	RPUSD1	98	57.049	Macaca_mulatta
ENSSPAG00000012708	rpusd1	98	57.049	ENSMNEG00000042712	RPUSD1	98	57.049	Macaca_nemestrina
ENSSPAG00000012708	rpusd1	98	57.049	ENSMLEG00000030591	RPUSD1	98	57.049	Mandrillus_leucophaeus
ENSSPAG00000012708	rpusd1	100	90.032	ENSMAMG00000004735	rpusd1	100	89.711	Mastacembelus_armatus
ENSSPAG00000012708	rpusd1	99	87.138	ENSMZEG00005003214	rpusd1	100	87.138	Maylandia_zebra
ENSSPAG00000012708	rpusd1	97	64.452	ENSMGAG00000005447	RPUSD1	99	64.452	Meleagris_gallopavo
ENSSPAG00000012708	rpusd1	81	57.312	ENSMAUG00000019998	Rpusd1	96	57.312	Mesocricetus_auratus
ENSSPAG00000012708	rpusd1	98	57.377	ENSMICG00000017561	RPUSD1	98	57.049	Microcebus_murinus
ENSSPAG00000012708	rpusd1	98	58.361	ENSMOCG00000014082	Rpusd1	98	58.361	Microtus_ochrogaster
ENSSPAG00000012708	rpusd1	99	79.412	ENSMMOG00000012569	rpusd1	99	81.373	Mola_mola
ENSSPAG00000012708	rpusd1	99	61.438	ENSMODG00000016882	RPUSD1	99	61.438	Monodelphis_domestica
ENSSPAG00000012708	rpusd1	100	84.566	ENSMALG00000017818	rpusd1	100	84.244	Monopterus_albus
ENSSPAG00000012708	rpusd1	98	59.016	MGP_CAROLIEiJ_G0021244	Rpusd1	98	58.361	Mus_caroli
ENSSPAG00000012708	rpusd1	98	58.689	ENSMUSG00000041199	Rpusd1	98	58.689	Mus_musculus
ENSSPAG00000012708	rpusd1	98	58.361	MGP_PahariEiJ_G0023562	Rpusd1	98	58.689	Mus_pahari
ENSSPAG00000012708	rpusd1	98	58.689	MGP_SPRETEiJ_G0022155	Rpusd1	98	58.689	Mus_spretus
ENSSPAG00000012708	rpusd1	96	57.667	ENSMPUG00000015897	RPUSD1	96	57.667	Mustela_putorius_furo
ENSSPAG00000012708	rpusd1	98	58.361	ENSMLUG00000001089	RPUSD1	98	58.689	Myotis_lucifugus
ENSSPAG00000012708	rpusd1	98	57.705	ENSNGAG00000003595	Rpusd1	98	57.705	Nannospalax_galili
ENSSPAG00000012708	rpusd1	99	84.244	ENSNBRG00000006457	rpusd1	100	82.524	Neolamprologus_brichardi
ENSSPAG00000012708	rpusd1	54	48.521	ENSNLEG00000008424	-	97	48.521	Nomascus_leucogenys
ENSSPAG00000012708	rpusd1	98	61.184	ENSMEUG00000016049	RPUSD1	98	61.184	Notamacropus_eugenii
ENSSPAG00000012708	rpusd1	98	51.307	ENSOPRG00000008340	RPUSD1	98	51.148	Ochotona_princeps
ENSSPAG00000012708	rpusd1	98	57.705	ENSODEG00000016945	RPUSD1	98	57.705	Octodon_degus
ENSSPAG00000012708	rpusd1	99	87.338	ENSONIG00000015672	rpusd1	100	87.338	Oreochromis_niloticus
ENSSPAG00000012708	rpusd1	100	79.032	ENSORLG00000013009	rpusd1	100	79.032	Oryzias_latipes
ENSSPAG00000012708	rpusd1	100	78.710	ENSORLG00020010382	rpusd1	100	78.710	Oryzias_latipes_hni
ENSSPAG00000012708	rpusd1	100	77.742	ENSORLG00015021354	rpusd1	100	77.742	Oryzias_latipes_hsok
ENSSPAG00000012708	rpusd1	100	78.710	ENSOMEG00000021426	rpusd1	100	79.032	Oryzias_melastigma
ENSSPAG00000012708	rpusd1	98	57.049	ENSOGAG00000003795	RPUSD1	98	57.049	Otolemur_garnettii
ENSSPAG00000012708	rpusd1	98	60.656	ENSOARG00000014254	RPUSD1	98	60.328	Ovis_aries
ENSSPAG00000012708	rpusd1	98	56.721	ENSPPAG00000034797	RPUSD1	98	56.721	Pan_paniscus
ENSSPAG00000012708	rpusd1	98	58.361	ENSPPRG00000012389	RPUSD1	98	57.705	Panthera_pardus
ENSSPAG00000012708	rpusd1	98	57.980	ENSPTIG00000008545	RPUSD1	77	74.510	Panthera_tigris_altaica
ENSSPAG00000012708	rpusd1	98	56.721	ENSPTRG00000007565	RPUSD1	98	56.721	Pan_troglodytes
ENSSPAG00000012708	rpusd1	98	57.049	ENSPANG00000024401	RPUSD1	98	57.049	Papio_anubis
ENSSPAG00000012708	rpusd1	99	70.645	ENSPKIG00000018890	rpusd1	91	70.227	Paramormyrops_kingsleyae
ENSSPAG00000012708	rpusd1	98	64.379	ENSPSIG00000013945	RPUSD1	99	64.379	Pelodiscus_sinensis
ENSSPAG00000012708	rpusd1	99	76.699	ENSPMGG00000014950	rpusd1	99	76.052	Periophthalmus_magnuspinnatus
ENSSPAG00000012708	rpusd1	98	57.705	ENSPEMG00000000497	Rpusd1	98	57.705	Peromyscus_maniculatus_bairdii
ENSSPAG00000012708	rpusd1	99	55.049	ENSPMAG00000001563	rpusd1	99	54.870	Petromyzon_marinus
ENSSPAG00000012708	rpusd1	99	62.418	ENSPCIG00000021216	-	93	62.418	Phascolarctos_cinereus
ENSSPAG00000012708	rpusd1	99	84.142	ENSPFOG00000007946	rpusd1	100	84.142	Poecilia_formosa
ENSSPAG00000012708	rpusd1	99	84.466	ENSPLAG00000011925	rpusd1	100	84.466	Poecilia_latipinna
ENSSPAG00000012708	rpusd1	99	84.142	ENSPMEG00000002910	rpusd1	100	84.142	Poecilia_mexicana
ENSSPAG00000012708	rpusd1	99	85.113	ENSPREG00000019851	rpusd1	100	85.113	Poecilia_reticulata
ENSSPAG00000012708	rpusd1	98	44.262	ENSPCAG00000002258	RPUSD1	98	43.607	Procavia_capensis
ENSSPAG00000012708	rpusd1	98	56.721	ENSPCOG00000022582	RPUSD1	98	56.721	Propithecus_coquereli
ENSSPAG00000012708	rpusd1	98	53.770	ENSPVAG00000013104	RPUSD1	98	53.770	Pteropus_vampyrus
ENSSPAG00000012708	rpusd1	99	87.460	ENSPNYG00000024076	rpusd1	100	87.460	Pundamilia_nyererei
ENSSPAG00000012708	rpusd1	99	67.532	ENSPNAG00000013806	rpusd1	99	66.775	Pygocentrus_nattereri
ENSSPAG00000012708	rpusd1	98	59.150	ENSRNOG00000023639	Rpusd1	98	58.689	Rattus_norvegicus
ENSSPAG00000012708	rpusd1	98	57.655	ENSRBIG00000030238	RPUSD1	98	57.377	Rhinopithecus_bieti
ENSSPAG00000012708	rpusd1	98	57.655	ENSRROG00000036663	RPUSD1	98	57.377	Rhinopithecus_roxellana
ENSSPAG00000012708	rpusd1	98	58.033	ENSSBOG00000033063	RPUSD1	98	57.705	Saimiri_boliviensis_boliviensis
ENSSPAG00000012708	rpusd1	98	61.842	ENSSHAG00000013500	RPUSD1	98	61.184	Sarcophilus_harrisii
ENSSPAG00000012708	rpusd1	98	71.711	ENSSFOG00015014394	rpusd1	99	71.053	Scleropages_formosus
ENSSPAG00000012708	rpusd1	99	89.320	ENSSMAG00000008045	rpusd1	93	89.320	Scophthalmus_maximus
ENSSPAG00000012708	rpusd1	100	91.935	ENSSDUG00000001829	rpusd1	97	91.935	Seriola_dumerili
ENSSPAG00000012708	rpusd1	100	91.935	ENSSLDG00000020853	rpusd1	97	91.935	Seriola_lalandi_dorsalis
ENSSPAG00000012708	rpusd1	53	73.054	ENSSARG00000011187	-	100	73.054	Sorex_araneus
ENSSPAG00000012708	rpusd1	62	59.067	ENSSPUG00000005119	-	98	58.163	Sphenodon_punctatus
ENSSPAG00000012708	rpusd1	98	58.689	ENSSSCG00000008000	RPUSD1	98	66.929	Sus_scrofa
ENSSPAG00000012708	rpusd1	81	71.315	ENSTGUG00000015375	RPUSD1	99	71.315	Taeniopygia_guttata
ENSSPAG00000012708	rpusd1	100	82.903	ENSTRUG00000003041	rpusd1	99	82.903	Takifugu_rubripes
ENSSPAG00000012708	rpusd1	99	73.203	ENSTNIG00000002660	rpusd1	99	73.203	Tetraodon_nigroviridis
ENSSPAG00000012708	rpusd1	98	58.689	ENSTTRG00000010167	RPUSD1	98	58.689	Tursiops_truncatus
ENSSPAG00000012708	rpusd1	98	57.705	ENSUAMG00000012736	RPUSD1	98	58.033	Ursus_americanus
ENSSPAG00000012708	rpusd1	98	57.705	ENSUMAG00000021174	RPUSD1	91	65.613	Ursus_maritimus
ENSSPAG00000012708	rpusd1	98	58.689	ENSVVUG00000012357	RPUSD1	98	58.033	Vulpes_vulpes
ENSSPAG00000012708	rpusd1	98	63.487	ENSXETG00000007184	rpusd1	98	62.418	Xenopus_tropicalis
ENSSPAG00000012708	rpusd1	99	83.819	ENSXCOG00000017930	rpusd1	100	83.819	Xiphophorus_couchianus
ENSSPAG00000012708	rpusd1	99	84.142	ENSXMAG00000024084	rpusd1	100	84.142	Xiphophorus_maculatus