EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000012800 (Gene tree)
Gene ID: 103374281
Gene Symbol: rad54b
Alias: im:7137737|im:7153525
Full Name: DNA repair and recombination protein RAD54B-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 19189 bases
Position: chrKK582265.1:55770-74958
Accession: 103374281
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000016981	ResIII	PF04851.15	6.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000017245	-	2646	XM_008304348	ENSSPAP00000016981	881 (aa)	XP_008302570	-

Gene Model

Click here to download ENSSPAG00000012800's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000012800's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000012800	rad54b	64	30.414	ENSSPAG00000004484	ercc6l2	51	30.678
ENSSPAG00000012800	rad54b	74	42.964	ENSSPAG00000011016	rad54l	85	42.729

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000012800	rad54b	83	58.752	ENSG00000265817	FSBP	99	58.752	Homo_sapiens
ENSSPAG00000012800	rad54b	99	54.978	ENSG00000197275	RAD54B	99	54.978	Homo_sapiens
ENSSPAG00000012800	rad54b	99	55.592	ENSAMEG00000005834	-	99	55.592	Ailuropoda_melanoleuca
ENSSPAG00000012800	rad54b	100	85.520	ENSACIG00000013005	rad54b	100	85.520	Amphilophus_citrinellus
ENSSPAG00000012800	rad54b	100	85.776	ENSAOCG00000008523	rad54b	100	85.776	Amphiprion_ocellaris
ENSSPAG00000012800	rad54b	100	83.371	ENSAPEG00000001673	rad54b	100	83.371	Amphiprion_percula
ENSSPAG00000012800	rad54b	100	84.677	ENSATEG00000001527	rad54b	100	84.677	Anabas_testudineus
ENSSPAG00000012800	rad54b	99	57.267	ENSAPLG00000014366	-	99	57.267	Anas_platyrhynchos
ENSSPAG00000012800	rad54b	89	60.533	ENSACAG00000003671	-	98	60.533	Anolis_carolinensis
ENSSPAG00000012800	rad54b	73	60.308	ENSANAG00000019528	-	99	60.308	Aotus_nancymaae
ENSSPAG00000012800	rad54b	100	86.152	ENSACLG00000007826	rad54b	100	86.152	Astatotilapia_calliptera
ENSSPAG00000012800	rad54b	89	68.193	ENSAMXG00000039985	rad54b	94	67.844	Astyanax_mexicanus
ENSSPAG00000012800	rad54b	99	55.277	ENSBTAG00000000632	RAD54B	99	55.277	Bos_taurus
ENSSPAG00000012800	rad54b	88	33.411	WBGene00013792	Y116A8C.13	96	33.333	Caenorhabditis_elegans
ENSSPAG00000012800	rad54b	99	55.229	ENSCJAG00000000080	-	99	58.936	Callithrix_jacchus
ENSSPAG00000012800	rad54b	99	55.761	ENSCAFG00000009179	RAD54B	99	55.761	Canis_familiaris
ENSSPAG00000012800	rad54b	99	55.761	ENSCAFG00020012084	-	99	55.761	Canis_lupus_dingo
ENSSPAG00000012800	rad54b	99	55.386	ENSCHIG00000008230	-	99	55.386	Capra_hircus
ENSSPAG00000012800	rad54b	99	55.930	ENSTSYG00000013234	-	99	55.930	Carlito_syrichta
ENSSPAG00000012800	rad54b	99	55.837	ENSCPOG00000011643	-	99	55.947	Cavia_porcellus
ENSSPAG00000012800	rad54b	99	55.943	ENSCCAG00000011754	-	99	58.936	Cebus_capucinus
ENSSPAG00000012800	rad54b	99	55.786	ENSCATG00000030661	-	99	59.016	Cercocebus_atys
ENSSPAG00000012800	rad54b	99	56.250	ENSCLAG00000010476	-	99	56.250	Chinchilla_lanigera
ENSSPAG00000012800	rad54b	99	55.349	ENSCSAG00000012712	-	99	55.349	Chlorocebus_sabaeus
ENSSPAG00000012800	rad54b	99	57.266	ENSCPBG00000003204	-	98	59.600	Chrysemys_picta_bellii
ENSSPAG00000012800	rad54b	99	55.568	ENSCANG00000017939	-	99	59.153	Colobus_angolensis_palliatus
ENSSPAG00000012800	rad54b	99	55.743	ENSCGRG00001020184	Rad54b	99	55.743	Cricetulus_griseus_chok1gshd
ENSSPAG00000012800	rad54b	99	53.437	ENSCGRG00000016752	Rad54b	99	53.437	Cricetulus_griseus_crigri
ENSSPAG00000012800	rad54b	99	79.977	ENSCSEG00000001601	rad54b	99	79.796	Cynoglossus_semilaevis
ENSSPAG00000012800	rad54b	100	81.644	ENSCVAG00000009200	rad54b	100	81.644	Cyprinodon_variegatus
ENSSPAG00000012800	rad54b	99	62.754	ENSDARG00000092134	rad54b	99	68.955	Danio_rerio
ENSSPAG00000012800	rad54b	99	55.398	ENSDNOG00000015535	-	99	55.398	Dasypus_novemcinctus
ENSSPAG00000012800	rad54b	99	56.711	ENSDORG00000002492	Rad54b	99	56.793	Dipodomys_ordii
ENSSPAG00000012800	rad54b	86	58.660	ENSETEG00000010605	-	100	58.660	Echinops_telfairi
ENSSPAG00000012800	rad54b	99	47.414	ENSEBUG00000009104	rad54b	98	47.414	Eptatretus_burgeri
ENSSPAG00000012800	rad54b	90	59.097	ENSEASG00005004021	-	89	59.097	Equus_asinus_asinus
ENSSPAG00000012800	rad54b	99	55.060	ENSECAG00000021949	-	99	55.060	Equus_caballus
ENSSPAG00000012800	rad54b	75	50.307	ENSEEUG00000008056	-	72	50.307	Erinaceus_europaeus
ENSSPAG00000012800	rad54b	100	71.902	ENSELUG00000009287	rad54b	100	71.474	Esox_lucius
ENSSPAG00000012800	rad54b	99	55.277	ENSFCAG00000015513	-	99	59.673	Felis_catus
ENSSPAG00000012800	rad54b	99	57.592	ENSFALG00000005467	-	99	57.592	Ficedula_albicollis
ENSSPAG00000012800	rad54b	99	55.447	ENSFDAG00000020541	-	100	55.447	Fukomys_damarensis
ENSSPAG00000012800	rad54b	99	78.107	ENSFHEG00000014382	rad54b	96	78.449	Fundulus_heteroclitus
ENSSPAG00000012800	rad54b	89	82.197	ENSGMOG00000014774	rad54b	99	82.197	Gadus_morhua
ENSSPAG00000012800	rad54b	99	57.375	ENSGALG00000043597	RAD54B	99	57.375	Gallus_gallus
ENSSPAG00000012800	rad54b	99	82.633	ENSGAFG00000007901	rad54b	99	82.633	Gambusia_affinis
ENSSPAG00000012800	rad54b	99	79.565	ENSGACG00000009128	rad54b	99	79.565	Gasterosteus_aculeatus
ENSSPAG00000012800	rad54b	99	57.282	ENSGAGG00000018747	-	99	57.282	Gopherus_agassizii
ENSSPAG00000012800	rad54b	99	55.049	ENSGGOG00000023516	-	99	55.049	Gorilla_gorilla
ENSSPAG00000012800	rad54b	100	82.024	ENSHBUG00000016017	rad54b	99	82.024	Haplochromis_burtoni
ENSSPAG00000012800	rad54b	99	54.703	ENSHGLG00000008263	RAD54B	99	54.703	Heterocephalus_glaber_female
ENSSPAG00000012800	rad54b	99	54.028	ENSHGLG00100008108	-	99	54.028	Heterocephalus_glaber_male
ENSSPAG00000012800	rad54b	99	74.473	ENSHCOG00000004764	rad54b	98	76.733	Hippocampus_comes
ENSSPAG00000012800	rad54b	89	67.632	ENSIPUG00000018531	rad54b	83	67.632	Ictalurus_punctatus
ENSSPAG00000012800	rad54b	99	54.486	ENSSTOG00000010791	-	99	54.486	Ictidomys_tridecemlineatus
ENSSPAG00000012800	rad54b	99	54.162	ENSJJAG00000010314	Rad54b	99	54.162	Jaculus_jaculus
ENSSPAG00000012800	rad54b	100	79.001	ENSKMAG00000004744	rad54b	100	79.001	Kryptolebias_marmoratus
ENSSPAG00000012800	rad54b	85	63.782	ENSLACG00000000859	-	100	63.782	Latimeria_chalumnae
ENSSPAG00000012800	rad54b	99	63.519	ENSLOCG00000010100	rad54b	94	68.919	Lepisosteus_oculatus
ENSSPAG00000012800	rad54b	90	58.040	ENSLAFG00000015315	-	97	58.040	Loxodonta_africana
ENSSPAG00000012800	rad54b	99	55.677	ENSMFAG00000031629	-	99	59.016	Macaca_fascicularis
ENSSPAG00000012800	rad54b	99	55.677	ENSMMUG00000005659	-	99	55.677	Macaca_mulatta
ENSSPAG00000012800	rad54b	99	55.628	ENSMNEG00000016408	-	99	55.628	Macaca_nemestrina
ENSSPAG00000012800	rad54b	99	55.568	ENSMLEG00000006946	-	99	55.568	Mandrillus_leucophaeus
ENSSPAG00000012800	rad54b	100	82.095	ENSMAMG00000012269	rad54b	99	82.095	Mastacembelus_armatus
ENSSPAG00000012800	rad54b	100	82.131	ENSMZEG00005005281	rad54b	97	88.300	Maylandia_zebra
ENSSPAG00000012800	rad54b	99	56.616	ENSMGAG00000012024	-	99	56.616	Meleagris_gallopavo
ENSSPAG00000012800	rad54b	99	55.196	ENSMAUG00000013586	Rad54b	99	55.196	Mesocricetus_auratus
ENSSPAG00000012800	rad54b	99	55.642	ENSMICG00000000754	-	99	55.642	Microcebus_murinus
ENSSPAG00000012800	rad54b	99	55.222	ENSMOCG00000020035	Rad54b	99	55.111	Microtus_ochrogaster
ENSSPAG00000012800	rad54b	99	81.348	ENSMMOG00000003394	rad54b	99	81.348	Mola_mola
ENSSPAG00000012800	rad54b	89	59.446	ENSMODG00000007343	-	97	59.446	Monodelphis_domestica
ENSSPAG00000012800	rad54b	73	86.470	ENSMALG00000001520	rad54b	100	86.470	Monopterus_albus
ENSSPAG00000012800	rad54b	99	55.605	MGP_CAROLIEiJ_G0025810	Rad54b	99	55.605	Mus_caroli
ENSSPAG00000012800	rad54b	99	55.138	ENSMUSG00000078773	Rad54b	99	55.138	Mus_musculus
ENSSPAG00000012800	rad54b	99	55.556	MGP_PahariEiJ_G0023933	Rad54b	99	55.556	Mus_pahari
ENSSPAG00000012800	rad54b	99	55.088	MGP_SPRETEiJ_G0026758	Rad54b	99	55.088	Mus_spretus
ENSSPAG00000012800	rad54b	90	59.724	ENSMPUG00000008878	-	97	59.724	Mustela_putorius_furo
ENSSPAG00000012800	rad54b	99	55.277	ENSMLUG00000008953	-	99	55.277	Myotis_lucifugus
ENSSPAG00000012800	rad54b	99	55.077	ENSNGAG00000017537	Rad54b	99	55.077	Nannospalax_galili
ENSSPAG00000012800	rad54b	100	86.266	ENSNBRG00000013394	rad54b	100	86.266	Neolamprologus_brichardi
ENSSPAG00000012800	rad54b	99	54.723	ENSNLEG00000003062	-	99	58.345	Nomascus_leucogenys
ENSSPAG00000012800	rad54b	72	63.333	ENSMEUG00000012426	-	69	63.333	Notamacropus_eugenii
ENSSPAG00000012800	rad54b	99	56.127	ENSODEG00000019564	-	99	56.018	Octodon_degus
ENSSPAG00000012800	rad54b	83	79.545	ENSODEG00000002650	-	97	79.545	Octodon_degus
ENSSPAG00000012800	rad54b	100	83.734	ENSONIG00000006067	rad54b	100	83.734	Oreochromis_niloticus
ENSSPAG00000012800	rad54b	86	59.424	ENSOANG00000011348	-	99	59.424	Ornithorhynchus_anatinus
ENSSPAG00000012800	rad54b	99	55.000	ENSOCUG00000016478	-	99	55.000	Oryctolagus_cuniculus
ENSSPAG00000012800	rad54b	100	76.546	ENSORLG00000008918	rad54b	100	85.736	Oryzias_latipes
ENSSPAG00000012800	rad54b	73	85.581	ENSORLG00020012171	rad54b	100	85.581	Oryzias_latipes_hni
ENSSPAG00000012800	rad54b	100	76.221	ENSORLG00015018536	rad54b	100	76.221	Oryzias_latipes_hsok
ENSSPAG00000012800	rad54b	88	84.665	ENSOMEG00000004345	rad54b	100	84.665	Oryzias_melastigma
ENSSPAG00000012800	rad54b	99	53.688	ENSOGAG00000007854	-	99	53.688	Otolemur_garnettii
ENSSPAG00000012800	rad54b	90	60.000	ENSOARG00000007691	-	97	60.000	Ovis_aries
ENSSPAG00000012800	rad54b	99	53.896	ENSPPAG00000029572	-	99	53.896	Pan_paniscus
ENSSPAG00000012800	rad54b	99	55.060	ENSPPRG00000007571	-	99	59.401	Panthera_pardus
ENSSPAG00000012800	rad54b	83	59.264	ENSPTIG00000012670	-	99	59.264	Panthera_tigris_altaica
ENSSPAG00000012800	rad54b	99	54.870	ENSPTRG00000020427	-	99	58.480	Pan_troglodytes
ENSSPAG00000012800	rad54b	99	55.677	ENSPANG00000019566	-	99	55.677	Papio_anubis
ENSSPAG00000012800	rad54b	99	63.952	ENSPKIG00000014974	rad54b	99	63.952	Paramormyrops_kingsleyae
ENSSPAG00000012800	rad54b	99	55.927	ENSPSIG00000002383	-	96	61.055	Pelodiscus_sinensis
ENSSPAG00000012800	rad54b	99	55.494	ENSPEMG00000012133	Rad54b	99	55.494	Peromyscus_maniculatus_bairdii
ENSSPAG00000012800	rad54b	89	57.881	ENSPMAG00000002916	rad54b	98	58.512	Petromyzon_marinus
ENSSPAG00000012800	rad54b	90	59.446	ENSPCIG00000020151	-	92	59.068	Phascolarctos_cinereus
ENSSPAG00000012800	rad54b	99	79.828	ENSPFOG00000023411	rad54b	99	79.828	Poecilia_formosa
ENSSPAG00000012800	rad54b	99	79.936	ENSPLAG00000010430	rad54b	99	79.936	Poecilia_latipinna
ENSSPAG00000012800	rad54b	99	81.093	ENSPMEG00000016873	rad54b	99	81.093	Poecilia_mexicana
ENSSPAG00000012800	rad54b	99	82.393	ENSPREG00000018443	rad54b	99	82.393	Poecilia_reticulata
ENSSPAG00000012800	rad54b	99	54.853	ENSPPYG00000018750	-	99	54.853	Pongo_abelii
ENSSPAG00000012800	rad54b	99	55.713	ENSPCOG00000026845	-	99	58.583	Propithecus_coquereli
ENSSPAG00000012800	rad54b	85	57.923	ENSPVAG00000000261	-	86	57.923	Pteropus_vampyrus
ENSSPAG00000012800	rad54b	90	87.516	ENSPNYG00000018303	rad54b	96	87.516	Pundamilia_nyererei
ENSSPAG00000012800	rad54b	99	63.503	ENSPNAG00000000295	rad54b	99	63.503	Pygocentrus_nattereri
ENSSPAG00000012800	rad54b	99	55.703	ENSRNOG00000039949	Rad54b	99	55.703	Rattus_norvegicus
ENSSPAG00000012800	rad54b	99	55.240	ENSRBIG00000020419	-	99	55.240	Rhinopithecus_bieti
ENSSPAG00000012800	rad54b	99	55.240	ENSRROG00000039897	-	99	55.240	Rhinopithecus_roxellana
ENSSPAG00000012800	rad54b	81	37.595	YBR073W	RDH54	79	37.484	Saccharomyces_cerevisiae
ENSSPAG00000012800	rad54b	99	55.120	ENSSBOG00000028501	-	99	55.120	Saimiri_boliviensis_boliviensis
ENSSPAG00000012800	rad54b	99	55.761	ENSSHAG00000017038	-	99	55.761	Sarcophilus_harrisii
ENSSPAG00000012800	rad54b	65	71.103	ENSSFOG00015008483	rad54b	89	71.103	Scleropages_formosus
ENSSPAG00000012800	rad54b	98	86.358	ENSSMAG00000018659	rad54b	99	83.732	Scophthalmus_maximus
ENSSPAG00000012800	rad54b	97	79.344	ENSSDUG00000001122	rad54b	96	79.344	Seriola_dumerili
ENSSPAG00000012800	rad54b	100	81.973	ENSSLDG00000013787	rad54b	100	81.973	Seriola_lalandi_dorsalis
ENSSPAG00000012800	rad54b	99	58.751	ENSSPUG00000016497	-	99	58.751	Sphenodon_punctatus
ENSSPAG00000012800	rad54b	99	55.740	ENSSSCG00000006101	-	98	59.673	Sus_scrofa
ENSSPAG00000012800	rad54b	99	58.009	ENSTGUG00000011880	-	99	58.009	Taeniopygia_guttata
ENSSPAG00000012800	rad54b	98	82.061	ENSTRUG00000010015	rad54b	92	82.061	Takifugu_rubripes
ENSSPAG00000012800	rad54b	99	51.743	ENSTTRG00000006312	-	99	51.743	Tursiops_truncatus
ENSSPAG00000012800	rad54b	99	55.543	ENSUMAG00000016401	-	99	55.543	Ursus_maritimus
ENSSPAG00000012800	rad54b	99	54.744	ENSVPAG00000003157	-	99	54.744	Vicugna_pacos
ENSSPAG00000012800	rad54b	99	49.013	ENSXETG00000025924	rad54b	99	53.234	Xenopus_tropicalis
ENSSPAG00000012800	rad54b	99	82.293	ENSXMAG00000013141	rad54b	99	82.293	Xiphophorus_maculatus