EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000012955 (Gene tree)
Gene ID: 103354128
Gene Symbol: si:dkey-34d22.5
Alias: -
Full Name: ras-related protein Rab-39B-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 1531 bases
Position: chrKK580168.1:601558-603088
Accession: 103354128
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000017172	MMR_HSR1	PF01926.23	7.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000017438	-	669	XM_008277402	ENSSPAP00000017172	222 (aa)	XP_008275624	UPI0004964040

Gene Model

Click here to download ENSSPAG00000012955's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000012955's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000012955	si:dkey-34d22.5	79	40.341	ENSSPAG00000015564	rab1ab	75	40.341
ENSSPAG00000012955	si:dkey-34d22.5	77	35.673	ENSSPAG00000011419	rab11bb	77	35.673
ENSSPAG00000012955	si:dkey-34d22.5	95	36.449	ENSSPAG00000009276	rab6bb	94	36.449
ENSSPAG00000012955	si:dkey-34d22.5	78	36.994	ENSSPAG00000019393	RAB11A	83	36.994
ENSSPAG00000012955	si:dkey-34d22.5	85	37.629	ENSSPAG00000005785	rab33a	83	37.629
ENSSPAG00000012955	si:dkey-34d22.5	74	35.366	ENSSPAG00000022624	-	71	35.366
ENSSPAG00000012955	si:dkey-34d22.5	77	41.860	ENSSPAG00000006302	si:dkey-16l2.16	80	41.860
ENSSPAG00000012955	si:dkey-34d22.5	93	43.750	ENSSPAG00000005141	-	94	43.750
ENSSPAG00000012955	si:dkey-34d22.5	67	42.000	ENSSPAG00000006404	zgc:101559	63	42.000
ENSSPAG00000012955	si:dkey-34d22.5	71	32.911	ENSSPAG00000007357	hrasb	86	32.143
ENSSPAG00000012955	si:dkey-34d22.5	67	41.333	ENSSPAG00000004801	rab33ba	61	41.333
ENSSPAG00000012955	si:dkey-34d22.5	78	34.483	ENSSPAG00000017348	rab34a	65	34.483
ENSSPAG00000012955	si:dkey-34d22.5	50	36.607	ENSSPAG00000002659	RAP2B	99	34.815
ENSSPAG00000012955	si:dkey-34d22.5	75	34.940	ENSSPAG00000006436	rab5c	86	34.000
ENSSPAG00000012955	si:dkey-34d22.5	75	36.145	ENSSPAG00000021333	rab22a	84	36.145
ENSSPAG00000012955	si:dkey-34d22.5	74	44.848	ENSSPAG00000015211	rab15	76	44.848
ENSSPAG00000012955	si:dkey-34d22.5	71	33.121	ENSSPAG00000005867	rheb	83	33.121
ENSSPAG00000012955	si:dkey-34d22.5	75	32.530	ENSSPAG00000004878	rras	82	32.530
ENSSPAG00000012955	si:dkey-34d22.5	97	31.081	ENSSPAG00000017313	rab11ba	95	31.081
ENSSPAG00000012955	si:dkey-34d22.5	71	34.177	ENSSPAG00000012674	rhebl1	84	34.177
ENSSPAG00000012955	si:dkey-34d22.5	91	33.495	ENSSPAG00000023345	RAB7A	93	33.495
ENSSPAG00000012955	si:dkey-34d22.5	77	40.936	ENSSPAG00000006001	rab41	77	40.936
ENSSPAG00000012955	si:dkey-34d22.5	81	32.240	ENSSPAG00000002062	RAB29	85	32.240
ENSSPAG00000012955	si:dkey-34d22.5	71	38.217	ENSSPAG00000010373	rab23	74	37.821
ENSSPAG00000012955	si:dkey-34d22.5	92	42.512	ENSSPAG00000022927	rab14	93	42.512
ENSSPAG00000012955	si:dkey-34d22.5	87	63.212	ENSSPAG00000016167	rab42a	99	58.182
ENSSPAG00000012955	si:dkey-34d22.5	77	43.275	ENSSPAG00000022440	-	84	43.275
ENSSPAG00000012955	si:dkey-34d22.5	91	33.981	ENSSPAG00000001423	-	93	33.981
ENSSPAG00000012955	si:dkey-34d22.5	81	40.437	ENSSPAG00000012564	-	89	40.437
ENSSPAG00000012955	si:dkey-34d22.5	77	42.442	ENSSPAG00000008400	rab35b	98	37.900
ENSSPAG00000012955	si:dkey-34d22.5	86	56.316	ENSSPAG00000010771	RAB39B	88	56.316
ENSSPAG00000012955	si:dkey-34d22.5	90	38.235	ENSSPAG00000017366	rab6ba	94	38.235
ENSSPAG00000012955	si:dkey-34d22.5	80	42.222	ENSSPAG00000020875	rab18b	86	42.222
ENSSPAG00000012955	si:dkey-34d22.5	97	31.481	ENSSPAG00000015817	rab25a	96	31.481
ENSSPAG00000012955	si:dkey-34d22.5	97	31.944	ENSSPAG00000012044	rab11al	95	31.944
ENSSPAG00000012955	si:dkey-34d22.5	73	30.488	ENSSPAG00000011401	-	77	30.488
ENSSPAG00000012955	si:dkey-34d22.5	87	30.882	ENSSPAG00000023440	rasl11a	77	30.882
ENSSPAG00000012955	si:dkey-34d22.5	74	41.420	ENSSPAG00000007900	rab9a	80	41.420
ENSSPAG00000012955	si:dkey-34d22.5	74	41.420	ENSSPAG00000011224	-	76	41.420
ENSSPAG00000012955	si:dkey-34d22.5	80	38.298	ENSSPAG00000009806	rab9b	84	38.298
ENSSPAG00000012955	si:dkey-34d22.5	76	33.929	ENSSPAG00000015015	rras2	81	33.929
ENSSPAG00000012955	si:dkey-34d22.5	96	32.864	ENSSPAG00000015678	rab5aa	90	32.864
ENSSPAG00000012955	si:dkey-34d22.5	79	42.286	ENSSPAG00000013533	zgc:171927	80	42.286
ENSSPAG00000012955	si:dkey-34d22.5	95	36.150	ENSSPAG00000001067	-	93	36.150
ENSSPAG00000012955	si:dkey-34d22.5	69	42.308	ENSSPAG00000010224	-	70	42.308
ENSSPAG00000012955	si:dkey-34d22.5	69	31.373	ENSSPAG00000009928	kras	85	30.723
ENSSPAG00000012955	si:dkey-34d22.5	71	32.716	ENSSPAG00000009154	dnajc27	58	32.716
ENSSPAG00000012955	si:dkey-34d22.5	76	44.643	ENSSPAG00000023185	RAB15	77	44.643
ENSSPAG00000012955	si:dkey-34d22.5	77	35.673	ENSSPAG00000014559	-	77	35.673
ENSSPAG00000012955	si:dkey-34d22.5	78	34.483	ENSSPAG00000002801	rab34b	68	34.483
ENSSPAG00000012955	si:dkey-34d22.5	97	32.407	ENSSPAG00000018203	rab36	79	32.407
ENSSPAG00000012955	si:dkey-34d22.5	80	35.955	ENSSPAG00000012060	rab25b	85	36.782
ENSSPAG00000012955	si:dkey-34d22.5	85	57.143	ENSSPAG00000010919	-	88	57.143
ENSSPAG00000012955	si:dkey-34d22.5	75	32.143	ENSSPAG00000018992	si:cabz01085950.1	82	32.143
ENSSPAG00000012955	si:dkey-34d22.5	75	42.515	ENSSPAG00000013422	rab30	80	42.515
ENSSPAG00000012955	si:dkey-34d22.5	76	40.237	ENSSPAG00000022676	rab1ba	82	40.237
ENSSPAG00000012955	si:dkey-34d22.5	72	40.994	ENSSPAG00000010822	rab12	83	35.349
ENSSPAG00000012955	si:dkey-34d22.5	74	31.325	ENSSPAG00000021839	rasd4	78	31.325

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000012955	si:dkey-34d22.5	99	88.688	ENSACIG00000016958	si:dkey-34d22.5	99	88.688	Amphilophus_citrinellus
ENSSPAG00000012955	si:dkey-34d22.5	99	91.403	ENSATEG00000010784	si:dkey-34d22.5	86	91.403	Anabas_testudineus
ENSSPAG00000012955	si:dkey-34d22.5	99	60.455	ENSCPBG00000011236	-	99	60.455	Chrysemys_picta_bellii
ENSSPAG00000012955	si:dkey-34d22.5	99	79.638	ENSCSEG00000019183	si:dkey-34d22.5	99	79.638	Cynoglossus_semilaevis
ENSSPAG00000012955	si:dkey-34d22.5	99	87.330	ENSCVAG00000017064	si:dkey-34d22.5	99	87.330	Cyprinodon_variegatus
ENSSPAG00000012955	si:dkey-34d22.5	83	50.000	ENSDARG00000100379	si:dkey-34d22.2	98	50.000	Danio_rerio
ENSSPAG00000012955	si:dkey-34d22.5	97	58.796	ENSFALG00000001373	-	97	58.796	Ficedula_albicollis
ENSSPAG00000012955	si:dkey-34d22.5	99	88.288	ENSFHEG00000012041	si:dkey-34d22.5	99	88.288	Fundulus_heteroclitus
ENSSPAG00000012955	si:dkey-34d22.5	96	59.346	ENSGALG00000000994	-	95	59.346	Gallus_gallus
ENSSPAG00000012955	si:dkey-34d22.5	99	87.330	ENSGAFG00000008183	si:dkey-34d22.5	99	87.330	Gambusia_affinis
ENSSPAG00000012955	si:dkey-34d22.5	93	59.903	ENSGAGG00000004918	-	99	59.903	Gopherus_agassizii
ENSSPAG00000012955	si:dkey-34d22.5	100	77.027	ENSHCOG00000015692	si:dkey-34d22.5	100	77.027	Hippocampus_comes
ENSSPAG00000012955	si:dkey-34d22.5	99	90.498	ENSKMAG00000012778	si:dkey-34d22.5	99	90.498	Kryptolebias_marmoratus
ENSSPAG00000012955	si:dkey-34d22.5	99	86.425	ENSLBEG00000002926	si:dkey-34d22.5	100	86.425	Labrus_bergylta
ENSSPAG00000012955	si:dkey-34d22.5	88	63.265	ENSLACG00000012674	si:dkey-34d22.5	92	63.265	Latimeria_chalumnae
ENSSPAG00000012955	si:dkey-34d22.5	98	69.124	ENSLOCG00000003467	si:dkey-34d22.5	98	71.889	Lepisosteus_oculatus
ENSSPAG00000012955	si:dkey-34d22.5	99	85.520	ENSMMOG00000006846	si:dkey-34d22.5	99	85.520	Mola_mola
ENSSPAG00000012955	si:dkey-34d22.5	99	84.163	ENSMALG00000013152	si:dkey-34d22.5	99	84.163	Monopterus_albus
ENSSPAG00000012955	si:dkey-34d22.5	100	90.090	ENSORLG00000014099	si:dkey-34d22.5	100	90.090	Oryzias_latipes
ENSSPAG00000012955	si:dkey-34d22.5	100	89.640	ENSORLG00020020277	si:dkey-34d22.5	100	89.640	Oryzias_latipes_hni
ENSSPAG00000012955	si:dkey-34d22.5	100	89.640	ENSORLG00015000142	si:dkey-34d22.5	100	89.640	Oryzias_latipes_hsok
ENSSPAG00000012955	si:dkey-34d22.5	91	93.564	ENSOMEG00000017958	si:dkey-34d22.5	100	90.090	Oryzias_melastigma
ENSSPAG00000012955	si:dkey-34d22.5	97	75.926	ENSPKIG00000021209	si:dkey-34d22.5	99	75.926	Paramormyrops_kingsleyae
ENSSPAG00000012955	si:dkey-34d22.5	91	63.547	ENSPSIG00000006606	-	99	63.547	Pelodiscus_sinensis
ENSSPAG00000012955	si:dkey-34d22.5	99	84.163	ENSPMGG00000001298	-	99	84.163	Periophthalmus_magnuspinnatus
ENSSPAG00000012955	si:dkey-34d22.5	89	62.437	ENSPCIG00000022399	-	88	62.437	Phascolarctos_cinereus
ENSSPAG00000012955	si:dkey-34d22.5	99	87.783	ENSPFOG00000014499	si:dkey-34d22.5	99	87.783	Poecilia_formosa
ENSSPAG00000012955	si:dkey-34d22.5	99	87.783	ENSPLAG00000007773	si:dkey-34d22.5	99	87.783	Poecilia_latipinna
ENSSPAG00000012955	si:dkey-34d22.5	99	87.783	ENSPMEG00000012932	si:dkey-34d22.5	99	87.783	Poecilia_mexicana
ENSSPAG00000012955	si:dkey-34d22.5	89	61.929	ENSSHAG00000008520	-	88	61.929	Sarcophilus_harrisii
ENSSPAG00000012955	si:dkey-34d22.5	99	71.233	ENSSFOG00015012088	rab42	97	71.233	Scleropages_formosus
ENSSPAG00000012955	si:dkey-34d22.5	99	92.760	ENSSLDG00000002646	si:dkey-34d22.5	99	92.760	Seriola_lalandi_dorsalis
ENSSPAG00000012955	si:dkey-34d22.5	79	54.286	ENSXETG00000020622	rab39a	84	54.286	Xenopus_tropicalis
ENSSPAG00000012955	si:dkey-34d22.5	99	86.425	ENSXCOG00000008410	si:dkey-34d22.5	99	86.425	Xiphophorus_couchianus
ENSSPAG00000012955	si:dkey-34d22.5	99	86.425	ENSXMAG00000029317	si:dkey-34d22.5	99	86.425	Xiphophorus_maculatus