EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000012960 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 6027 bases
Position: chrKK580831.1:258265-264291
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000017195	zf-C2H2	PF00096.26	5.6e-51	1	9
ENSSPAP00000017195	zf-C2H2	PF00096.26	5.6e-51	2	9
ENSSPAP00000017195	zf-C2H2	PF00096.26	5.6e-51	3	9
ENSSPAP00000017195	zf-C2H2	PF00096.26	5.6e-51	4	9
ENSSPAP00000017195	zf-C2H2	PF00096.26	5.6e-51	5	9
ENSSPAP00000017195	zf-C2H2	PF00096.26	5.6e-51	6	9
ENSSPAP00000017195	zf-C2H2	PF00096.26	5.6e-51	7	9
ENSSPAP00000017195	zf-C2H2	PF00096.26	5.6e-51	8	9
ENSSPAP00000017195	zf-C2H2	PF00096.26	5.6e-51	9	9
ENSSPAP00000017195	zf-met	PF12874.7	4.1e-21	1	3
ENSSPAP00000017195	zf-met	PF12874.7	4.1e-21	2	3
ENSSPAP00000017195	zf-met	PF12874.7	4.1e-21	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000017461	-	1059	-	ENSSPAP00000017195	352 (aa)	-	-

Gene Model

Click here to download ENSSPAG00000012960's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000012960's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000012960	-	82	47.115	ENSSPAG00000001572	-	83	47.115
ENSSPAG00000012960	-	81	42.781	ENSSPAG00000008485	-	90	44.330
ENSSPAG00000012960	-	82	45.745	ENSSPAG00000012009	-	100	39.899
ENSSPAG00000012960	-	82	36.441	ENSSPAG00000018932	si:ch211-216l23.1	72	36.441
ENSSPAG00000012960	-	80	43.333	ENSSPAG00000004429	-	86	34.050
ENSSPAG00000012960	-	95	30.128	ENSSPAG00000002990	zbtb41	53	32.014
ENSSPAG00000012960	-	89	36.771	ENSSPAG00000021928	-	80	36.771
ENSSPAG00000012960	-	80	47.863	ENSSPAG00000019245	-	97	47.107
ENSSPAG00000012960	-	93	43.429	ENSSPAG00000008865	-	88	46.739
ENSSPAG00000012960	-	82	44.330	ENSSPAG00000015776	-	81	44.330
ENSSPAG00000012960	-	80	49.057	ENSSPAG00000000064	-	82	49.057
ENSSPAG00000012960	-	80	41.765	ENSSPAG00000008610	-	76	42.241
ENSSPAG00000012960	-	73	31.799	ENSSPAG00000021437	-	71	41.121
ENSSPAG00000012960	-	82	44.762	ENSSPAG00000021435	-	91	44.762
ENSSPAG00000012960	-	80	45.556	ENSSPAG00000015809	-	56	45.556
ENSSPAG00000012960	-	80	53.704	ENSSPAG00000022041	-	83	53.704
ENSSPAG00000012960	-	81	47.561	ENSSPAG00000006832	-	57	47.059
ENSSPAG00000012960	-	87	42.353	ENSSPAG00000007197	-	84	42.353
ENSSPAG00000012960	-	84	41.667	ENSSPAG00000007403	-	98	40.807
ENSSPAG00000012960	-	78	35.714	ENSSPAG00000001452	-	61	31.313
ENSSPAG00000012960	-	80	38.828	ENSSPAG00000004352	-	75	38.828
ENSSPAG00000012960	-	82	36.552	ENSSPAG00000023063	-	68	34.483
ENSSPAG00000012960	-	82	38.953	ENSSPAG00000022914	gfi1b	53	38.953
ENSSPAG00000012960	-	82	39.344	ENSSPAG00000003796	-	66	34.615
ENSSPAG00000012960	-	80	48.276	ENSSPAG00000002681	-	65	48.276
ENSSPAG00000012960	-	80	40.000	ENSSPAG00000021653	-	86	40.000
ENSSPAG00000012960	-	90	34.783	ENSSPAG00000013866	prdm5	74	34.783
ENSSPAG00000012960	-	81	49.367	ENSSPAG00000014129	-	97	49.367
ENSSPAG00000012960	-	80	41.837	ENSSPAG00000015796	-	72	41.837
ENSSPAG00000012960	-	80	39.815	ENSSPAG00000009140	gfi1ab	67	39.815
ENSSPAG00000012960	-	81	53.846	ENSSPAG00000007454	-	89	53.846
ENSSPAG00000012960	-	82	40.698	ENSSPAG00000006208	-	84	40.698
ENSSPAG00000012960	-	96	36.667	ENSSPAG00000016701	znf646	75	36.667
ENSSPAG00000012960	-	82	45.178	ENSSPAG00000009653	-	84	45.178
ENSSPAG00000012960	-	79	34.532	ENSSPAG00000014018	scrt2	56	34.532
ENSSPAG00000012960	-	82	47.059	ENSSPAG00000020165	-	90	42.412
ENSSPAG00000012960	-	89	35.644	ENSSPAG00000005832	-	97	35.644
ENSSPAG00000012960	-	79	53.704	ENSSPAG00000021008	-	93	42.353
ENSSPAG00000012960	-	78	40.698	ENSSPAG00000006788	-	52	34.328
ENSSPAG00000012960	-	81	43.605	ENSSPAG00000007691	-	83	43.605
ENSSPAG00000012960	-	80	47.475	ENSSPAG00000001478	-	99	45.652
ENSSPAG00000012960	-	84	42.222	ENSSPAG00000006148	-	77	42.222
ENSSPAG00000012960	-	82	47.887	ENSSPAG00000014607	-	88	46.491
ENSSPAG00000012960	-	84	40.517	ENSSPAG00000007500	znf319b	84	39.370
ENSSPAG00000012960	-	80	47.222	ENSSPAG00000011524	-	67	42.353
ENSSPAG00000012960	-	78	40.506	ENSSPAG00000022061	snai2	67	40.506
ENSSPAG00000012960	-	84	51.282	ENSSPAG00000011533	-	83	51.282
ENSSPAG00000012960	-	77	37.975	ENSSPAG00000001098	-	56	37.975
ENSSPAG00000012960	-	86	41.379	ENSSPAG00000013118	-	61	41.379
ENSSPAG00000012960	-	78	40.909	ENSSPAG00000002200	scrt1b	53	40.909
ENSSPAG00000012960	-	80	38.095	ENSSPAG00000005733	-	72	36.929
ENSSPAG00000012960	-	83	48.333	ENSSPAG00000008448	-	65	48.333
ENSSPAG00000012960	-	81	34.862	ENSSPAG00000011544	-	52	38.037
ENSSPAG00000012960	-	81	43.956	ENSSPAG00000005402	-	61	45.370
ENSSPAG00000012960	-	86	42.424	ENSSPAG00000002850	-	87	38.136
ENSSPAG00000012960	-	96	44.269	ENSSPAG00000019049	-	96	46.281
ENSSPAG00000012960	-	81	44.324	ENSSPAG00000020960	-	94	41.322
ENSSPAG00000012960	-	80	41.667	ENSSPAG00000010524	-	53	41.667
ENSSPAG00000012960	-	80	46.316	ENSSPAG00000022868	-	88	46.316
ENSSPAG00000012960	-	83	48.966	ENSSPAG00000022865	-	94	46.875
ENSSPAG00000012960	-	86	43.151	ENSSPAG00000021950	-	54	37.500
ENSSPAG00000012960	-	71	43.836	ENSSPAG00000009396	-	62	41.892
ENSSPAG00000012960	-	82	44.444	ENSSPAG00000014689	-	83	44.444
ENSSPAG00000012960	-	86	45.217	ENSSPAG00000000384	-	99	45.217
ENSSPAG00000012960	-	81	34.397	ENSSPAG00000021401	ZNF319	96	38.655
ENSSPAG00000012960	-	86	40.076	ENSSPAG00000008958	-	92	39.604
ENSSPAG00000012960	-	81	44.615	ENSSPAG00000008950	-	69	44.615
ENSSPAG00000012960	-	82	40.187	ENSSPAG00000015016	-	98	38.384
ENSSPAG00000012960	-	87	41.176	ENSSPAG00000002174	-	84	41.176
ENSSPAG00000012960	-	86	41.204	ENSSPAG00000020771	-	98	41.204
ENSSPAG00000012960	-	83	45.690	ENSSPAG00000007231	-	94	43.519
ENSSPAG00000012960	-	81	36.571	ENSSPAG00000005690	-	62	36.571
ENSSPAG00000012960	-	80	43.605	ENSSPAG00000021934	-	67	38.889
ENSSPAG00000012960	-	82	45.946	ENSSPAG00000022844	-	78	44.366
ENSSPAG00000012960	-	79	40.120	ENSSPAG00000022219	-	61	40.120
ENSSPAG00000012960	-	83	34.884	ENSSPAG00000009426	-	58	34.884
ENSSPAG00000012960	-	80	49.107	ENSSPAG00000023136	znf526	66	43.448
ENSSPAG00000012960	-	76	41.463	ENSSPAG00000021516	-	85	41.463
ENSSPAG00000012960	-	82	40.602	ENSSPAG00000006749	-	90	38.889
ENSSPAG00000012960	-	69	36.842	ENSSPAG00000001700	zgc:171929	66	36.842
ENSSPAG00000012960	-	87	39.801	ENSSPAG00000004449	-	79	39.801
ENSSPAG00000012960	-	80	43.182	ENSSPAG00000005716	-	74	43.182
ENSSPAG00000012960	-	80	39.785	ENSSPAG00000013109	si:ch211-241b2.1	69	40.000
ENSSPAG00000012960	-	79	46.552	ENSSPAG00000017203	-	53	46.552
ENSSPAG00000012960	-	93	35.439	ENSSPAG00000009587	-	95	35.439
ENSSPAG00000012960	-	87	41.150	ENSSPAG00000004470	-	75	41.150
ENSSPAG00000012960	-	81	43.421	ENSSPAG00000021978	-	99	43.421
ENSSPAG00000012960	-	81	37.313	ENSSPAG00000006539	-	88	40.367

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000012960	-	80	43.750	ENSAPOG00000013511	-	50	43.750	Acanthochromis_polyacanthus
ENSSPAG00000012960	-	80	42.775	ENSAPOG00000004328	-	87	42.775	Acanthochromis_polyacanthus
ENSSPAG00000012960	-	81	37.838	ENSACIG00000010739	-	79	37.838	Amphilophus_citrinellus
ENSSPAG00000012960	-	83	43.931	ENSAOCG00000007045	-	83	43.931	Amphiprion_ocellaris
ENSSPAG00000012960	-	97	37.500	ENSAPEG00000001596	-	85	37.500	Amphiprion_percula
ENSSPAG00000012960	-	82	39.100	ENSAPEG00000016483	-	59	43.363	Amphiprion_percula
ENSSPAG00000012960	-	80	43.353	ENSATEG00000006085	-	85	43.353	Anabas_testudineus
ENSSPAG00000012960	-	81	42.705	ENSACAG00000000082	-	99	42.705	Anolis_carolinensis
ENSSPAG00000012960	-	80	43.519	ENSACAG00000025537	-	98	43.519	Anolis_carolinensis
ENSSPAG00000012960	-	79	44.298	ENSAMXG00000033013	-	84	44.928	Astyanax_mexicanus
ENSSPAG00000012960	-	80	43.750	ENSAMXG00000036257	-	97	43.750	Astyanax_mexicanus
ENSSPAG00000012960	-	90	48.598	ENSAMXG00000035145	-	63	48.598	Astyanax_mexicanus
ENSSPAG00000012960	-	82	45.000	ENSAMXG00000032237	-	90	45.495	Astyanax_mexicanus
ENSSPAG00000012960	-	89	45.817	ENSAMXG00000026143	-	96	45.817	Astyanax_mexicanus
ENSSPAG00000012960	-	86	49.091	ENSAMXG00000035949	-	83	48.594	Astyanax_mexicanus
ENSSPAG00000012960	-	79	50.769	ENSAMXG00000012873	-	92	50.769	Astyanax_mexicanus
ENSSPAG00000012960	-	82	36.398	ENSCVAG00000011235	-	85	36.398	Cyprinodon_variegatus
ENSSPAG00000012960	-	80	38.652	ENSELUG00000021287	-	76	39.711	Esox_lucius
ENSSPAG00000012960	-	88	35.685	ENSELUG00000013844	-	77	35.685	Esox_lucius
ENSSPAG00000012960	-	80	43.452	ENSELUG00000013357	-	85	43.452	Esox_lucius
ENSSPAG00000012960	-	86	39.286	ENSFHEG00000019915	-	74	43.363	Fundulus_heteroclitus
ENSSPAG00000012960	-	98	46.667	ENSGMOG00000003238	-	100	46.667	Gadus_morhua
ENSSPAG00000012960	-	82	38.647	ENSGAFG00000012977	-	88	38.647	Gambusia_affinis
ENSSPAG00000012960	-	86	38.144	ENSGAFG00000003150	-	95	49.057	Gambusia_affinis
ENSSPAG00000012960	-	81	46.358	ENSIPUG00000021556	-	91	46.358	Ictalurus_punctatus
ENSSPAG00000012960	-	80	44.014	ENSIPUG00000006916	-	78	44.014	Ictalurus_punctatus
ENSSPAG00000012960	-	79	42.786	ENSIPUG00000004428	-	79	42.786	Ictalurus_punctatus
ENSSPAG00000012960	-	82	42.775	ENSKMAG00000004988	-	85	42.775	Kryptolebias_marmoratus
ENSSPAG00000012960	-	83	41.696	ENSLOCG00000014144	-	99	41.696	Lepisosteus_oculatus
ENSSPAG00000012960	-	91	42.945	ENSLOCG00000014366	-	93	42.945	Lepisosteus_oculatus
ENSSPAG00000012960	-	82	43.363	ENSMAMG00000016542	-	63	43.363	Mastacembelus_armatus
ENSSPAG00000012960	-	82	42.017	ENSMAMG00000019301	-	96	36.872	Mastacembelus_armatus
ENSSPAG00000012960	-	82	43.750	ENSMMOG00000009852	-	89	43.750	Mola_mola
ENSSPAG00000012960	-	89	43.750	ENSMALG00000005554	-	88	43.750	Monopterus_albus
ENSSPAG00000012960	-	79	36.052	ENSOCUG00000005876	-	100	37.657	Oryctolagus_cuniculus
ENSSPAG00000012960	-	82	46.988	ENSPKIG00000006616	-	59	46.988	Paramormyrops_kingsleyae
ENSSPAG00000012960	-	82	36.207	ENSPMGG00000017633	-	89	41.270	Periophthalmus_magnuspinnatus
ENSSPAG00000012960	-	84	39.910	ENSPFOG00000010682	-	93	35.606	Poecilia_formosa
ENSSPAG00000012960	-	82	37.931	ENSPLAG00000002892	-	69	38.384	Poecilia_latipinna
ENSSPAG00000012960	-	82	35.659	ENSPMEG00000001399	-	88	38.647	Poecilia_mexicana
ENSSPAG00000012960	-	81	40.217	ENSPREG00000002582	-	61	40.217	Poecilia_reticulata
ENSSPAG00000012960	-	82	35.659	ENSPREG00000001386	-	88	38.647	Poecilia_reticulata
ENSSPAG00000012960	-	81	36.879	ENSPNAG00000025570	-	80	37.063	Pygocentrus_nattereri
ENSSPAG00000012960	-	80	44.898	ENSPNAG00000000219	-	94	44.898	Pygocentrus_nattereri
ENSSPAG00000012960	-	79	46.696	ENSPNAG00000015116	-	68	46.696	Pygocentrus_nattereri
ENSSPAG00000012960	-	81	46.988	ENSSFOG00015006108	-	57	46.988	Scleropages_formosus
ENSSPAG00000012960	-	80	45.977	ENSSMAG00000009115	-	84	49.057	Scophthalmus_maximus
ENSSPAG00000012960	-	88	40.157	ENSSDUG00000002195	-	96	37.931	Seriola_dumerili
ENSSPAG00000012960	-	82	37.308	ENSSDUG00000006463	-	86	40.097	Seriola_dumerili
ENSSPAG00000012960	-	83	44.118	ENSSLDG00000006724	-	95	44.118	Seriola_lalandi_dorsalis
ENSSPAG00000012960	-	80	44.608	ENSSLDG00000020727	-	96	37.607	Seriola_lalandi_dorsalis
ENSSPAG00000012960	-	88	39.841	ENSTRUG00000005321	-	95	38.929	Takifugu_rubripes
ENSSPAG00000012960	-	83	38.194	ENSTRUG00000021675	-	72	38.194	Takifugu_rubripes
ENSSPAG00000012960	-	80	37.729	ENSTNIG00000008200	-	99	37.729	Tetraodon_nigroviridis
ENSSPAG00000012960	-	79	45.500	ENSTNIG00000000320	-	100	45.500	Tetraodon_nigroviridis
ENSSPAG00000012960	-	82	48.341	ENSXETG00000006575	znf420	77	48.341	Xenopus_tropicalis
ENSSPAG00000012960	-	78	45.000	ENSXCOG00000009665	-	84	38.710	Xiphophorus_couchianus
ENSSPAG00000012960	-	82	38.647	ENSXMAG00000028625	-	87	38.647	Xiphophorus_maculatus