EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000013052 (Gene tree)
Gene ID: 103364512
Gene Symbol: tnrc6c2
Alias: si:dkey-10p5.9
Full Name: trinucleotide repeat-containing gene 6C protein-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 36865 bases
Position: chrKK580088.1:1575872-1612736
Accession: 103364512
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000017308	Ago_hook	PF10427.9	7.1e-08	1	1
ENSSPAP00000017308	RRM_1	PF00076.22	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000017575	-	5717	XM_008291659	ENSSPAP00000017308	1892 (aa)	XP_008289881	UPI000496DDE2

Gene Model

Click here to download ENSSPAG00000013052's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000013052's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000013052	tnrc6c2	98	55.367	ENSSPAG00000014977	tnrc6c1	98	56.522

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000013052	tnrc6c2	99	95.530	ENSAOCG00000017648	tnrc6c2	99	95.317	Amphiprion_ocellaris
ENSSPAG00000013052	tnrc6c2	83	90.308	ENSATEG00000003656	tnrc6c2	99	89.868	Anabas_testudineus
ENSSPAG00000013052	tnrc6c2	99	89.834	ENSACLG00000006469	tnrc6c2	99	89.727	Astatotilapia_calliptera
ENSSPAG00000013052	tnrc6c2	87	59.310	ENSAMXG00000009579	tnrc6c2	100	58.195	Astyanax_mexicanus
ENSSPAG00000013052	tnrc6c2	91	57.978	ENSDARG00000103851	tnrc6c2	100	56.965	Danio_rerio
ENSSPAG00000013052	tnrc6c2	79	68.906	ENSELUG00000008149	-	99	81.633	Esox_lucius
ENSSPAG00000013052	tnrc6c2	87	62.251	ENSELUG00000007206	tnrc6c2	100	62.380	Esox_lucius
ENSSPAG00000013052	tnrc6c2	91	83.631	ENSFHEG00000003901	tnrc6c2	100	84.000	Fundulus_heteroclitus
ENSSPAG00000013052	tnrc6c2	50	81.913	ENSGACG00000019401	tnrc6c2	100	76.837	Gasterosteus_aculeatus
ENSSPAG00000013052	tnrc6c2	99	89.305	ENSHBUG00000018310	tnrc6c2	99	89.733	Haplochromis_burtoni
ENSSPAG00000013052	tnrc6c2	99	80.763	ENSHCOG00000017802	tnrc6c2	99	80.339	Hippocampus_comes
ENSSPAG00000013052	tnrc6c2	87	54.513	ENSIPUG00000022767	tnrc6c2	100	52.872	Ictalurus_punctatus
ENSSPAG00000013052	tnrc6c2	87	90.334	ENSMAMG00000001718	tnrc6c2	100	90.030	Mastacembelus_armatus
ENSSPAG00000013052	tnrc6c2	99	89.834	ENSMZEG00005023905	tnrc6c2	99	89.727	Maylandia_zebra
ENSSPAG00000013052	tnrc6c2	87	90.459	ENSMALG00000020932	tnrc6c2	100	89.734	Monopterus_albus
ENSSPAG00000013052	tnrc6c2	83	91.429	ENSNBRG00000000452	tnrc6c2	57	90.659	Neolamprologus_brichardi
ENSSPAG00000013052	tnrc6c2	85	87.337	ENSONIG00000018123	tnrc6c2	100	87.337	Oreochromis_niloticus
ENSSPAG00000013052	tnrc6c2	100	83.562	ENSORLG00000003327	tnrc6c2	99	83.059	Oryzias_latipes
ENSSPAG00000013052	tnrc6c2	100	83.570	ENSORLG00020010730	tnrc6c2	99	83.015	Oryzias_latipes_hni
ENSSPAG00000013052	tnrc6c2	100	83.096	ENSORLG00015009232	tnrc6c2	99	82.749	Oryzias_latipes_hsok
ENSSPAG00000013052	tnrc6c2	100	84.044	ENSOMEG00000017952	tnrc6c2	99	83.493	Oryzias_melastigma
ENSSPAG00000013052	tnrc6c2	91	80.191	ENSPFOG00000011590	tnrc6c2	99	79.873	Poecilia_formosa
ENSSPAG00000013052	tnrc6c2	84	89.053	ENSPLAG00000006992	tnrc6c2	61	87.474	Poecilia_latipinna
ENSSPAG00000013052	tnrc6c2	99	83.811	ENSPMEG00000012946	tnrc6c2	98	85.360	Poecilia_mexicana
ENSSPAG00000013052	tnrc6c2	87	80.698	ENSPREG00000015823	tnrc6c2	61	87.579	Poecilia_reticulata
ENSSPAG00000013052	tnrc6c2	87	90.413	ENSPNYG00000002582	tnrc6c2	100	90.716	Pundamilia_nyererei
ENSSPAG00000013052	tnrc6c2	87	57.717	ENSPNAG00000026838	tnrc6c2	100	58.551	Pygocentrus_nattereri
ENSSPAG00000013052	tnrc6c2	87	88.406	ENSSMAG00000015145	tnrc6c2	100	87.802	Scophthalmus_maximus
ENSSPAG00000013052	tnrc6c2	87	92.644	ENSSDUG00000020741	tnrc6c2	100	92.340	Seriola_dumerili
ENSSPAG00000013052	tnrc6c2	87	92.401	ENSSLDG00000002077	tnrc6c2	100	92.097	Seriola_lalandi_dorsalis
ENSSPAG00000013052	tnrc6c2	84	85.902	ENSTNIG00000004178	tnrc6c2	95	84.809	Tetraodon_nigroviridis
ENSSPAG00000013052	tnrc6c2	87	85.749	ENSXMAG00000006739	tnrc6c2	100	86.173	Xiphophorus_maculatus